Os09g0548000

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0548000| Description = Hypothetical protein| Version = NM_001189039.1 GI:297727208 GeneID:9269322| Length = 1992 bp| Definition = Oryza sa...")
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Gene Name

Os09g0548000

Description

Hypothetical protein

Version

NM_001189039.1 GI:297727208 GeneID:9269322

Length

1992 bp

Definition

Oryza sativa Japonica Group Os09g0548000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22499328..22501319

Sequence Coding Region

22500303..22500327,22500453..22500613,22500750..22500905,22501041..22501235

Expression

GEO Profiles:Os09g0548000

Genome Context

<gbrowseImage1> name=NC_008402:22499328..22501319 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22499328..22501319 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gacgatggagttgcatgtaggaccgcttctgtcagtgtgtatggttcttcccttgaagattatgaagatgaggacttaagcgaagatgaagatgaggacttaagcgatgggcatcatattgagtataatatccttggtgtcctttcacatgctagaagcctaaaattggtagctccgctacgagaggctttgttcgaggggtgcttattgacatgcccggtcttcaacaacttgaaatgtttggtatttggtgactggtgcatggattttgacctttatccactacgctgtgttcttaagcaatcaccaatattagaggagctctgtgtggaacttcgtgagaaagagtgcgagtattgcaaggaaaaagcaccacctttctcgtactcgtatggggaaatattgccatttaagtgtcatcgccttaagactgtcaaaatcaaatgtggagaacgtgatgaaagatttatcgctttggtgaaactgtttttcaagatctcagtctgtattgagaaatttgacttagataggtggtga</cdnaseq>

Protein Sequence

<aaseq>DDGVACRTASVSVYGSSLEDYEDEDLSEDEDEDLSDGHHIEYNI LGVLSHARSLKLVAPLREALFEGCLLTCPVFNNLKCLVFGDWCMDFDLYPLRCVLKQS PILEELCVELREKECEYCKEKAPPFSYSYGEILPFKCHRLKTVKIKCGERDERFIALV KLFFKISVCIEKFDLDRW</aaseq>

Gene Sequence

<dnaseqindica>976..1000#1126..1286#1423..1578#1714..1908#aacggatgcccatgggagcgagcgacgacggacggacggagacctatcgggtggcgaaggtgccgacttcgggggaacctcctgacccactctggtctcctctcgacagctccgccacttcctctccctcctcactgctccactcgcgacgactgctaggagccctccttcccgttgatagtcccatgctgctgctactggtgctcgtcccccgcctccagcactctcatccccagcacctattctcttccccccttctcccctctgcctaccgtggccgcctgcctcatcaggaggactatgacgccagttatcatcgccctccaggctaattgttccatctacttgatttctgccactcaagctgctctaataccctttgttctttctctgtaaaatttgtagatctgggatgtgtggcaatttgtgttttttttcactcggaacatatcagaacttgtagcaatggagaatccgtgcatttgtttctgcaatgaactggaattggctgaacatttctgacgcatgtggatgctggttttgctttgaatttcagttgatataaatgttgtctgtcctatgtggatttcgtacgttctgtttggtgatttacagaacagggaagttctgtactttaaaatcggtggcaaatttctgtgttggtgaattttcctgttatataaatctcttcaacctctggctagtggcaagccacaatctcatccttgattctcatcctgtagctgttggcagcaacgactgagtctcagcttccatagcttgtgccctatctcacatccatcatggttggtctgcacagcaccaaacgtcaaagaaaatataccaggcagctccattggcggtcggcccaggatcttgtggcatggcggcacaggatcacagcctaccggggcatgcagcgcggcgcggcgccggagaatgggcgtgcggcggcagcgtggagagaacgattaagacgatggagttgcatgtaggaccggtaattacccatcccaatcctaccctttttaaatggacggttagatttgaatggtacctcttgatacctgtacctcgtggtacctcctaaaggatggtaaaaatcctctaacagagtaacaacagcttctgtcagtgtgtatggttcttcccttgaagattatgaagatgaggacttaagcgaagatgaagatgaggacttaagcgatgggcatcatattgagtataatatccttggtgtcctttcacatgctagaagcctaaaattggtagctccgctacgagaggtttgcacaaactactctgactatttcatcttaagttggttttcatttatgtcttgactactatggttagttttatcatcgttgatacaataggtaacctaaaattaagttttgattctactttttgggtgtataggctttgttcgaggggtgcttattgacatgcccggtcttcaacaacttgaaatgtttggtatttggtgactggtgcatggattttgacctttatccactacgctgtgttcttaagcaatcaccaatattagaggagctctgtgtggaacttcgtgaggtacgtaaattgttctgcgtcttataaccgtgcaagggcaactaagcaatgtgtgttttgtgatggttgtgttattgatgagcttacaactgttgtttagtactaaatgaaacatttggttttgttatattgcagaaagagtgcgagtattgcaaggaaaaagcaccacctttctcgtactcgtatggggaaatattgccatttaagtgtcatcgccttaagactgtcaaaatcaaatgtggagaacgtgatgaaagatttatcgctttggtgaaactgtttttcaagatctcagtctgtattgagaaatttgacttagataggtggtgagttcgggtacaagcctgtgccttcctagtctgtgaaggccgtagaaacattaagaaatatatatatgtctcatgatttaaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0548000, RefSeq:Os09g0548000