Os05g0453800

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0453800| Description = GINS complex, Psf1 component family protein| Version = NM_001187525.1 GI:297724180 GeneID:9268604| Length = 4192 bp|...")
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Gene Name

Os05g0453800

Description

GINS complex, Psf1 component family protein

Version

NM_001187525.1 GI:297724180 GeneID:9268604

Length

4192 bp

Definition

Oryza sativa Japonica Group Os05g0453800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22325698..22329889

Sequence Coding Region

22325698..22325886,22328088..22328155,22328357..22328470,22328585..22328747,22328824..22328970
,22329472..22329516,22329824..22329889

Expression

GEO Profiles:Os05g0453800

Genome Context

<gbrowseImage1> name=NC_008398:22325698..22329889 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22325698..22329889 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgtcgtcgcgcggtggccgcggcggtcgtccctttcaaccgtcggccttaacgtagcccagcaatccaagccaaatcaaaaatcggtgctcgtcgtgatactcgacctcgcgctcccgttcgtgctcctctccgcgtacctccgcgccagggacgcgtcgttcgtggaggccgtcgtcgcgcagagcgatgtgtttgatcaggttattagagagtgcaatgaacacaatacacagtttcagtcattgataaggaaaatggtggagcagaacttagacattgaaacaaccagaaatgacgaccactatggggcagccgtccatcatctttcgctgcttcgtaacaaaagatgtctcatggcttacatgtataaccgagcagaggttattcagagctttagatggaaaatcggcccagtgcttcctcatgaaatacaagaaaagctccatttttctgagaaagagtacttcaagaaccactcagcagccattaaatcatatatgtcagagatggatatagatttaacagtggacatggtgcctcccaaggatccctacatccaggttcgggtgcttgaggacattggtgaagtatctcttggtgaccattccatatcattgacaaagaactcacttcatttcctaaggcgcactgatactgaacaatttatatcacagagcctatgtgaaaatcaaagaacatatgctgtctcagctgtgaagttctggatctcggatatggaattagtcagaaaacataaccaagctgattccaagcaagaatggtga</cdnaseq>

Protein Sequence

<aaseq>MAVVARWPRRSSLSTVGLNVAQQSKPNQKSVLVVILDLALPFVL LSAYLRARDASFVEAVVAQSDVFDQVIRECNEHNTQFQSLIRKMVEQNLDIETTRNDD HYGAAVHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHEIQEKLHFSEKEYFKN HSAAIKSYMSEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSISLTKNSLHFLRR TDTEQFISQSLCENQRTYAVSAVKFWISDMELVRKHNQADSKQEW</aaseq>

Gene Sequence

<dnaseqindica>1..189#2391..2458#2660..2773#2888..3050#3127..3273#3775..3819#4127..4192#atggctgtcgtcgcgcggtggccgcggcggtcgtccctttcaaccgtcggccttaacgtagcccagcaatccaagccaaatcaaaaatcggtgctcgtcgtgatactcgacctcgcgctcccgttcgtgctcctctccgcgtacctccgcgccagggacgcgtcgttcgtggaggccgtcgtcgcgcaggtgtgggttttcgacttccggtcgtcgctcgtcgacctcctcgccgtctccgtcgcgcgcttctgatactctgcgtaggaggaagagagaggaaagtgggcggatgatgacgtggccaccctagcatgtggggcccacgtgggtcccacgctaattcagccgcctcagaggataaaatcggagtcgaaaccactgagaaacattatttgcactggttttataagttaggggatgcgttgtatccggttttgcggttcaagatcgattttgtaactcgatgataagttgagggtccttcggtgtactttttccaaaaaaaaatatcactagacataccagcccaaaaggcctactagatataacgcctcctacggtcctaccaattaacccaacccatcccgagcatggctccacctcactggcccatcgaccaactttggcccatcgagcatggttccccaatttttttttcgaaaacttcacatcgaatctttggacatatgcattgagcattaaatatatagattataaaaactaattatatagttaggtgggaaatcacgagacaaaccttttgagtctaattagtccatgattagccatatgtgctacagtaattcacatatgctaatgacggattaattatgctcaagagattcatctcgtgctttccaggcgagttatgaaattagttttttttcgtgtccgaaaaccccttccgatattcggttaaacatctgatgtgacacccaaaaaatttcttttcgtgaactaaacaggccctttcacgagcatcggcactacctcctccaccgctcccagctagtcgtagctaggaaaaagtacacggaaatctttcaccgaattacaaaactgttatttgaaccataaaattggatataatgcatccgtcaacttataaaatcagtgaaaaaaaatccctcaggagaataatccccggttttcattggtctatgtggctcttttaactaggtgttcgtcccatgttgacattaatgtggcactaacgtgataattcgataaaaaaaataaaaaacaaaacgcctagtactccctccgtcccagaatatagcaacctaggatgggataaggtcaggacaacgaatctggacatagtctcaccccatcctaagttgctactaaatccgtcctaaaatagaacaacttttagctatatagttgttcaaattcatagctaaaaatgcttatattttggaatggagggagtattagaaatgagggagcctatatgggacctacatgtcatcctcattctcatcttttctcctatctacttttcccgtcggagccagtcacgcccgaccgggtgtcgggcggggccccgttaccaacccgccaccttccacctcccctcccttcagccgtacactcccgcctcccaaatttcctcgaaaatttttcccgcgcggccgcaccaaaaattccccttccactccgccccgcaccgccccctagcacggcggcgccccccgtccaccgccagccgcgcgtgcccgccgcccgcttctcgtgcttctccccgccgtggcagatccggccctgcgctttagcgccattccgtcgaacacctcgagcgcgtcggaggctggaggaggatgtacgggcggcgcgcgtcgcagctgctgaaggaggtcgactcctgcgaggccggacagctcgtgccgttcaacgtaagtttctacccccccccccccctaagcgctcgcgtttcttagctctggggatctgagtggccggtgattaggtttcgtttgtggctatttttagggcggaattatggttggtctagctgcatagttgaaattgagttcataaatgtgcattttcaatcctacggggggaatgttatctgcatggtgtataactatcaggcgacagtttaaatttaaacgatttggcttttcggtctggtttgcaaaattgtatgtaatttgtgagctttcatttgtctatcttgatgatgaaatctagttctgaaatatactgagcttgcaaattgcaatcacatgaaagcacataaagtctggggctggtggtctggtgggggttaatgtaagttaagattaccgttcctgtgatgtgactgtggcagcatagtttaattagttcggttagttattatgcttggtccctaacttctttttcttatggatgtgcagagcgatgtgtttgatcaggttattagagagtgcaatgaacacaatacacagtttcagtcattgataaggtaaattgcttcctatcagaaaattgatcatcttcatctagttctgcaataagagttatgatcaattaatcaatttctaggatgtatttcacaggaaaaacagcacagaactatatcaaactaataaaactcttacttgacttcttcaccattacagtttacttaattttgattgcctgatttgcattgtgtttatgacaggaaaatggtggagcagaacttagacattgaaacaaccagaaatgacgaccactatggggcagccgtccatcatctttcgctgcttcgtaacaaaagatgtctcatggcttacatgtacaagactgaaatctcacagctgaacaaactttttactttctatgttttatgctgattttacatgcacgcactaattttgagtatggaactgaaagcactgagttcaatcaggtataaccgagcagaggttattcagagctttagatggaaaatcggcccagtgcttcctcatgaaatacaagaaaagctccatttttctgagaaagagtacttcaagaaccactcagcagccattaaatcatatatgtcagagatggatatagatttaacagtggtacagcatttttctgttttatttactttcttttggatgaaatacagttagcagattttctgtaccacttctataggacatggtgcctcccaaggatccctacatccaggttcgggtgcttgaggacattggtgaagtatctcttggtgaccattccatatcattgacaaagaactcacttcatttcctaaggcgcactgatactgaacaatttatatcacaggtttgctatcttacttttgtgatattctcagtgtgtttattccatctgctaataatgttctatcaaacttacaatagggtcttatggaagagtttctggagtagagatcacatatggtgtacaataggtattactcactaccttacaatatatgtacacgtttcatgatgacagttgacagatgaccagagctagcatgtcctatatcagaaaaggctttgatggtcaattggttactgatgaatatttttcattttacacatataaatagttaaatatcacatttttttaagaaagaaaattcaactatcaccacaacatgcatatattgaatttaccagttctaatagacacctattctgaaacactgtttgtgtttttgatctgatttctcaaaccatacatctctggcctgcagattgtaactgaggatatgactctactacagcatttattcgtcattgctatccaatggattaaacactactgaaattctgacagagcctatgtgaaaatcaaagaacatatgctgtctcagctgtgaaggtatgatgcaacatatatgaggggattgtgtaccggggtgctcctaacttatccatttcagtgatgtctagctttagatgaatgaatttaagtttgttctacactgtgaccattctttgcatgttgtattatttggtgataaaatcgaaacttcgtacactgtacaaaaatcttcctaaatttactggagtaggaaggtaacaagctctgttttagtgtttactggtgatgaagacctggagaagcctcatgcgttctgataaatgcagtttgattgactgctgtgttcgttttgctaaaactacagttctggatctcggatatggaattagtcagaaaacataaccaagctgattccaagcaagaatggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0453800, RefSeq:Os05g0453800