Os05g0454200

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0454200| Description = Similar to Pollen-specific kinase partner protein| Version = NM_001062253.1 GI:115464236 GeneID:4338974| Length = 37...")
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Gene Name

Os05g0454200

Description

Similar to Pollen-specific kinase partner protein

Version

NM_001062253.1 GI:115464236 GeneID:4338974

Length

3710 bp

Definition

Oryza sativa Japonica Group Os05g0454200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22339308..22343017

Sequence Coding Region

22339551..22339863,22339944..22340060,22340152..22340306,22340943..22341017,22341135..22341425
,22341898..22342248,22342346..22342750

Expression

GEO Profiles:Os05g0454200

Genome Context

<gbrowseImage1> name=NC_008398:22339308..22343017 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22339308..22343017 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagaggaggaggaggaggagaggaggcggcggaggaggagagggaggtgagcgaggcgctgacggcggactcgtcggccgacgaggagtgccgccgcgggagcagcagctccagcgcaagctccggggacgcctccagcgagtcctactgcccgcccgacgagtggcagaaggtggccatcaagacctgcgtgtcgtccgacctcgtcgtcgtctcggccgagccggccaaggagaagaagccgccgccgccgccgtcgtcgccgcgcgtcgacgccgccccggcggacaagcaccaccggccctcagagatggagatgatgaaggagaggttcgcgaagctgctgctcggcgaggacatgtccggcggcggcaagggcgtctgcaccgcgctcgccatctccaacgccatcaccaacctctgcgcgacgatatttgggcagctgtggaggctggagccgctgctgccggagaaaaagacgatgtggcggcgcgagatggactggctgctctgcgtcagcgaccacatcgtcgagctagtccccacatggcagacattccccgacgggagtaagcttgagatcatgacaagcaggccacggtctgatctctacatcaatctgcccgcactccgaaagctagaccacatgctcctcgaaattctggagagcttcagggacccggaattctggtacgtcgaccaggggatttgcccgccggaccgcgacggcagcgcccccttcatgctaacgttccaccgccgcgacgagaagtggtggctgcccgtgccccgcgtccctcccggcggcgtcggcgagaccacgaggaggcagctcgagcacaagcgcgactgcgccagccagatcctcaaggccgccatggccatcaacagcaacgccctcgccgaaatggacgtccccgactcttacctcgactcgttacccaagaacgggcgtgcgacgctgggcgacatcatatacaggtacatcacgtcggaccagttctcgccggactgcctgctcgactgcctcgacctgtcgtcggagtaccaggcgctggagatcgccaaccgcgtcgaggcctccatctacgtgtggcgccggaggggcacgtcgggcgccgcgagccgcgccggaaacaagtcgtcatggggcatcgtcaaggacatgatcatggacacggagaagagagacgacctcctcgccgaccgcgccgagggcctcctcatgtgcctcaagcagaggttccccggactgacgcagaccagcctggacacgagcaagattcagtacaacaaggatgtggggaaatcgattctggagagctactcgagggttctggagagcctggcgtcgaacatcatcgcgcggatcgacgacctgctgtacgtcgacgagcggagcaggcaggcggagctgcttccaaccgcgggcgccgggagcggcaagatctcttgcatgccggccatgtcggcgtcgtcggtgccggcgtacccggtggtgtccacctcgggcaccccgccgccgtacgcgacggcgtacgccacgccgagcttctcgccggcgcagctgtcgagcccatccaacatcgggagggcactgctggtcgaccggcggtcgcacgacggccgagcgttcgacggcagcatggagttcatggggatggcggtcagcaacgccgtgttcgacctaccgggcctgtga</cdnaseq>

Protein Sequence

<aaseq>MARGGGGGEEAAEEEREVSEALTADSSADEECRRGSSSSSASSG DASSESYCPPDEWQKVAIKTCVSSDLVVVSAEPAKEKKPPPPPSSPRVDAAPADKHHR PSEMEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLCATIFGQLWRLEPLLPEK KTMWRREMDWLLCVSDHIVELVPTWQTFPDGSKLEIMTSRPRSDLYINLPALRKLDHM LLEILESFRDPEFWYVDQGICPPDRDGSAPFMLTFHRRDEKWWLPVPRVPPGGVGETT RRQLEHKRDCASQILKAAMAINSNALAEMDVPDSYLDSLPKNGRATLGDIIYRYITSD QFSPDCLLDCLDLSSEYQALEIANRVEASIYVWRRRGTSGAASRAGNKSSWGIVKDMI MDTEKRDDLLADRAEGLLMCLKQRFPGLTQTSLDTSKIQYNKDVGKSILESYSRVLES LASNIIARIDDLLYVDERSRQAELLPTAGAGSGKISCMPAMSASSVPAYPVVSTSGTP PPYATAYATPSFSPAQLSSPSNIGRALLVDRRSHDGRAFDGSMEFMGMAVSNAVFDLP GL</aaseq>

Gene Sequence

<dnaseqindica>244..556#637..753#845..999#1636..1710#1828..2118#2591..2941#3039..3443#tgcatataccaccaccacctcccccgtcctcctctcctccaccgcaaccgcaaccacggccagccacgggccaagcgagtcacgactggcacaacgaggcaaaaacaccattgctacccccgaggcgtccctctcagctagccctggcacccgcaccacctagcggcggcgccgtcgtgttcgtgtcggccaagtcgtcaagaagctagctagtcattgccagtgggcgcattgtgctaggggatggcgagaggaggaggaggaggagaggaggcggcggaggaggagagggaggtgagcgaggcgctgacggcggactcgtcggccgacgaggagtgccgccgcgggagcagcagctccagcgcaagctccggggacgcctccagcgagtcctactgcccgcccgacgagtggcagaaggtggccatcaagacctgcgtgtcgtccgacctcgtcgtcgtctcggccgagccggccaaggagaagaagccgccgccgccgccgtcgtcgccgcgcgtcgacgccgccccggcggacaagcaccaccggccctcaggtacgtgcgccgccgccgcaaatccccagttcactcctcccttccaacacacgcggttaaattaattgaattggctgcagagatggagatgatgaaggagaggttcgcgaagctgctgctcggcgaggacatgtccggcggcggcaagggcgtctgcaccgcgctcgccatctccaacgccatcaccaacctctgcggtaagtgggaggtttcgaattgcacattgcgattaatgcggcggtttcatggacacggacatggaggctgagctgagttgcgttgctgcagcgacgatatttgggcagctgtggaggctggagccgctgctgccggagaaaaagacgatgtggcggcgcgagatggactggctgctctgcgtcagcgaccacatcgtcgagctagtccccacatggcagacattccccgacgggagtaagcttgaggtatactagtacttcacttcccctgacgaaatttactctgcacttctgcagtagttaagctaggagtgatacaggaattactaggatcatcagtgcgggccgttcgtgagcactgagtagcagatgcaagatttaatttggcgtcctacggatgaaccatgaagcgagtgcaaaattcgatttgaattttacatgaacatatggaccacaaaaagaaattatatatagtcattaaatacgtggttagccgtttggtacttagtaatcccgtttatattgaaacagttgggcgcgcgacgccgtatttctgaggcccaaaagagttaaggccacatcaatgtgctgtccgtttagttgtgtccgatttgtttgtcctcaaattatccggtccaaacgtgatccattactactctagatcaaatggagatccatcatttcccacttgctgcatctgtttacaccaatctttcttctgtagtgtccaactttattcgacaatgcaatgttcaggtctttttttggcaaggaaatgttcagtttcttttttttatgaactcttacacagacacattatataacttgtggtgagaacaatgataaactgactgttactctacatgtggattactacttcagatcatgacaagcaggccacggtctgatctctacatcaatctgcccgcactccgaaagctagaccacatgctcctcgtaagtctgacgaactctatctcggatcaacgatctgtccatccatccgaaaataaaagatgaactagtgctgtaataatgtgcatctcctgacgaaacgagcacatcttctgccaggaaattctggagagcttcagggacccggaattctggtacgtcgaccaggggatttgcccgccggaccgcgacggcagcgcccccttcatgctaacgttccaccgccgcgacgagaagtggtggctgcccgtgccccgcgtccctcccggcggcgtcggcgagaccacgaggaggcagctcgagcacaagcgcgactgcgccagccagatcctcaaggccgccatggccatcaacagcaacgccctcgccgaaatggacgtccccgactcttacctcgactcgttacccaaggtccaaatcaattctactacctgtagagaataggagacggattctaatcaaccgcaactaaatggttatgaattttttttaaaaaaataacaagatagattaatatgtaatatattactccacaaacatacaatttcgaatttaacttttacaagttataaaaaataacaaatttaattgcaaatatacgtatactaatttaagttttatttgttgtttttgttacaatttttagaagttgaaatttaacttacatgtttgtggagtgatatattacatattgttctatctttttaattatttttaaaaaagttttataattatttagatgacatgcattcacttgggtgattaaaagagttttccgtagagaatactgtaaaaattatcagaaaaaagaaaactacactaatgctcatcatacatgaacgtttgctgtttcttgattctgacattgatgtttgattgtcagaacgggcgtgcgacgctgggcgacatcatatacaggtacatcacgtcggaccagttctcgccggactgcctgctcgactgcctcgacctgtcgtcggagtaccaggcgctggagatcgccaaccgcgtcgaggcctccatctacgtgtggcgccggaggggcacgtcgggcgccgcgagccgcgccggaaacaagtcgtcatggggcatcgtcaaggacatgatcatggacacggagaagagagacgacctcctcgccgaccgcgccgagggcctcctcatgtgcctcaagcagaggttccccggactgacgcagaccagcctggacacgagcaagattcagtacaacaaggttggtgaatccatcatttgcagtttgcaaatctcgctatccgtgttgatggtgatcgggtttggatgaactgatcgtgagatgactctctcttcaggatgtggggaaatcgattctggagagctactcgagggttctggagagcctggcgtcgaacatcatcgcgcggatcgacgacctgctgtacgtcgacgagcggagcaggcaggcggagctgcttccaaccgcgggcgccgggagcggcaagatctcttgcatgccggccatgtcggcgtcgtcggtgccggcgtacccggtggtgtccacctcgggcaccccgccgccgtacgcgacggcgtacgccacgccgagcttctcgccggcgcagctgtcgagcccatccaacatcgggagggcactgctggtcgaccggcggtcgcacgacggccgagcgttcgacggcagcatggagttcatggggatggcggtcagcaacgccgtgttcgacctaccgggcctgtgaatcgatcgatcacgggccccgtgtctagtgctttacttaccctcgcctgtgtgcagtagttgtaatgttgtatggcgtgatttcttctcgggagggcggcctgtttttgccgtttcgccgtttcgccgccctccagttttatgatgtgttttgacagtgcctttgttaacttgctagtgttgtaagagtgcttaagttcgatgttggtcggatggcaaaagagaaccatcgcgtttgtgcaaaccacagagttttcttggctgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0454200, RefSeq:Os05g0454200