Os05g0454500

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0454500| Description = Conserved hypothetical protein| Version = NM_001062255.1 GI:115464240 GeneID:4338976| Length = 2787 bp| Definition ...")
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Gene Name

Os05g0454500

Description

Conserved hypothetical protein

Version

NM_001062255.1 GI:115464240 GeneID:4338976

Length

2787 bp

Definition

Oryza sativa Japonica Group Os05g0454500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22349384..22352170

Sequence Coding Region

22350749..22350765,22350849..22350909,22350997..22351166,22351499..22351586,22351851..22351949

Expression

GEO Profiles:Os05g0454500

Genome Context

<gbrowseImage1> name=NC_008398:22349384..22352170 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22349384..22352170 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactccaggaagaaatcgccgccctccaccgccgccggggccgcgccggcggcggcgaacgggtacttcagcaccgtcttctccgcgtcgcccacggcaaatacgaaagacgcgaagcaggcggacctgtacgcgatgctgaacaagcagaactccaaagggcagaatggcggtggctttgcagatggcaaatcgcacagccctactaaagctcgtggtgcatacaaggatggtaaacaatcatatccaaacgagtcatcggagtcgccatattttggctcttctgtgcattacggtgctcgggagttttatggcaacactccaccaaagcagggtgatgcatcaccaggaaatcaaaaggagcaggagcagaatccagatggctccctggctaccagaggtgattggtggcaaggttcactctattactaa</cdnaseq>

Protein Sequence

<aaseq>MDSRKKSPPSTAAGAAPAAANGYFSTVFSASPTANTKDAKQADL YAMLNKQNSKGQNGGGFADGKSHSPTKARGAYKDGKQSYPNESSESPYFGSSVHYGAR EFYGNTPPKQGDASPGNQKEQEQNPDGSLATRGDWWQGSLYY</aaseq>

Gene Sequence

<dnaseqindica>1406..1422#1262..1322#1005..1174#585..672#222..320#ggagcagggcgccacgaggcgagcagagaagtgtcgcttcccacctccgaccccgagccgcgccgccgcctataacgaccacttcacgtgccctatctttctccgcctcctcgctcacgagctcgtcctcctcttcttcttctccttccacggaagtctaggttcatctctcctctcctctcctctcctcgagcgccaagaaacccaaaccaccgacgtgtatggactccaggaagaaatcgccgccctccaccgccgccggggccgcgccggcggcggcgaacgggtacttcagcaccgtcttctccgcgtcgcccacggtataccgcgtctctctcctctcgcgccctcgtagactcgtagttggttcgattcgtgagatttttaaggattgttctctgtttctgttatgcgattgtcgcgcgagaggttggctcctcctttggtggattttttgttgttctgaattcgggaattcgggaattgtttcgggcgggttcatttgtgttggatgagttcttggtttctaggaaatcttatttgggtatccctctgatgttgctgcccttgtttttacatgaaaggcaaatacgaaagacgcgaagcaggcggacctgtacgcgatgctgaacaagcagaactccaaagggcagaatggcggtggctttgcaggtagtttgtgtgatatcctttttatttgacactagtatttaattgcggctaaacttgtgaacagagtaggataatcatctttcatgtcattagttgtcctgagaaatggatttaggatttcaggttatgtctaacgtcaacgatcatgcacgcacagtcgcacacacgctgttgcatttgatccaacatcaaagcacattgatctttgtagtaattttgctacctcttataaatttttcaaccatgtttaatgcatcatcttgatttggagaggagattctccatttctatgtgatacagcagccgcttaactgcaatctttcgtcatgcagatggcaaatcgcacagccctactaaagctcgtggtgcatacaaggatggtaaacaatcatatccaaacgagtcatcggagtcgccatattttggctcttctgtgcattacggtgctcgggagttttatggcaacactccaccaaagcagggtgatgcatcaccaggaaatgtgcgtagaaattgacactcttaattatcagcttctggttgcttgtatcactgacacttttatgttctctttgtatgtccaatccagcaaaaggagcaggagcagaatccagatggctccctggctaccagaggtgattggtggcaaggtatgtattatttggatattgtttataatttatacatgacgaaatacatgtgaagttgtgtactgactataatctactggcaggttcactctattactaagtactttgcagagggctctccttttgtcaaacaaggtatactatagcagcaactttattttaaaaagtctctgtaagcattatctatctttagtttgagcatgataggctggcggcagcatcagatagtattcgattgtttgtgttatatgacctatctgtcatagactcagacgcaactaagacatttatttctctggtagagtcaactaatagtagatactctttatttgttttgaatatttacaataaagagcttgcttggtcttattattaaaggaccatgaactatgtgctgtgtaagaggattatcattagagatgtggaacttctgaagcagctgaactaaggataatctaatttgctctttgtggtactgccttgtcataggctcaatgatataatctgttttcgttcctaatgcagacattaagaacttaggaaaatatccttgtttacattagtgccgtcctcatagttctggtgccaataattttacttgtcatatctgcgcacaatcattggatagtagtggaggttgacaatgatggctctactgcaaaattggtcaaatgtcttgaagtaaaagtttatcttgttagtagtttctaaaaagtacatacatctgacatgggtgatgcttagagcaatttcgcctcatgtttagaatgatatgaacatctgatgaagatgttcattttacgcgtttcttaacccaagaaacctgtttaacattttacagtttagttactccccaaggcattttaatttgtaggccacaatgactcacaaccatagtttgtcaggttttcccttataaacttattattgttaagcaatccatgcatatttggtgtcatttctccttttgttggcatatgacgaaaacatttgataggagcttagtgactttttcttttagaaaatggattaaaacagagcctctacatccaaacaggatgaggatgtatgcagccaattcccagtgacttgcagtaggaacttaagcttttcagattatcctattaagtttttaaggttttgtaatcagactgttctatataaaaatccatacaatgctttcatcattgcgatagcaatttctgtgcatcttattcgattgttttgtaccagaaataaaaggagtggtccaagccggtttgcaagtcatagtggaactatacatctgttctaccggtggaggcagtatttggatgcgtcatttcacctgagcagatgtggttgtgtgtgttactgtgcatgtgtgtgttgttttcctttttttttcctcttgccctttgttttgctgtttttacctgatgaagtataatgaaatggtagggcagcaacaggtagccctttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0454500, RefSeq:Os05g0454500