Os08g0473600
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0473600 |
|---|---|
| Description |
Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) |
| Version |
NM_001068558.1 GI:115476853 GeneID:4345812 |
| Length |
1943 bp |
| Definition |
Oryza sativa Japonica Group Os08g0473600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:23423175..23425117 |
| Sequence Coding Region |
23423303..23423392,23423536..23424474,23424560..23424844 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:23423175..23425117 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:23423175..23425117 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcaagcaccatgtcaccctgtgttgtgtcgtttttgctgtgctctgcctggcgtccagcttagcacaagcccaagttctcttccaggggtttaactgggagtcgtggaggaagcaaggcgggtggtacaactttctgcacgagaaggtggaggagatcgccagcacgggcgccacccacgtctggctcccgccgccgtcgcactctgtctcgccgcagggttacatgccggggcggctctacgacctggacgcgtccaagtacggcacggaggcggagctcaagtcgctgatcgaggcattccacgacaagaacgtcgagtgcctcgccgacatcgtcatcaaccaccgctgcgccgactacaaggacagccgcggcgtgtactgcgtgttcgagggcggcacgcccgacggccgcctcgactggggccccgacatgatctgcagcgacgacacgcagtactccaacggccgcggccaccgcgacaccggcgccgggttcggcgccgcgcccgacatcgaccacctcaacccgcgtgtccagcgggagctcaccgactggctcaactggctcaggaccgacctcggcttcgacggctggcgcctcgacttcgccaagggctactccgcgccgctggcgaggatctacgtcgacaacaccaacccgacgttcgtcgtcggcgagatctggagctcgctcatctacaacggcgacggcaagccgtcgaccaaccaggacgcggacaggcaggagctggtgaactgggtggagggcgtcggcaagccggcgacggcgttcgacttcaccaccaagggcatcctccaggccgccgtgcagggcgagctgtggaggctccacgacggcaacggcaaggcgcccggcctcatggggtggatgcccgatcaggccgtaaccttcgtcgacaaccacgacaccggctcgacccagtcgctctggccgttcccttccgacaaggtcatgcagggctacgcctacatcctcactcaccctggcatcccatgcatcttctacgaccatgtgttcgactggaacctgcagcacgagatcgcgacgctggctgaaatccggtcaaggaacgggatccatgcggagagcacgctggacatcctcaaggccgagggggacatctacgtcgccatgatcgacggcaaggtgatcaccaagctcgggccgaggtacgacgccggcgggatcatcccctccgacttccatgtcgtggcgcacggcaacgactactgcgtctgggagaaggaaggcctcagggttcctgccggtagaaagcactattag</cdnaseq> |
| Protein Sequence |
<aaseq>MGKHHVTLCCVVFAVLCLASSLAQAQVLFQGFNWESWRKQGGWY NFLHEKVEEIASTGATHVWLPPPSHSVSPQGYMPGRLYDLDASKYGTEAELKSLIEAF HDKNVECLADIVINHRCADYKDSRGVYCVFEGGTPDGRLDWGPDMICSDDTQYSNGRG HRDTGAGFGAAPDIDHLNPRVQRELTDWLNWLRTDLGFDGWRLDFAKGYSAPLARIYV DNTNPTFVVGEIWSSLIYNGDGKPSTNQDADRQELVNWVEGVGKPATAFDFTTKGILQ AAVQGELWRLHDGNGKAPGLMGWMPDQAVTFVDNHDTGSTQSLWPFPSDKVMQGYAYI LTHPGIPCIFYDHVFDWNLQHEIATLAEIRSRNGIHAESTLDILKAEGDIYVAMIDGK VITKLGPRYDAGGIIPSDFHVVAHGNDYCVWEKEGLRVPAGRKHY</aaseq> |
| Gene Sequence |
<dnaseqindica>129..218#362..1300#1386..1670#agagaagcagagtacagcaggcagctcttcttctctttgcgaaggttggctacttggccagccattaggaaacaagttagtttggagaagaagcagagttgagactgcatttgcattgctctgtagccatgggcaagcaccatgtcaccctgtgttgtgtcgtttttgctgtgctctgcctggcgtccagcttagcacaagcccaagttctcttccaggtagtttaatttactgacgccttggtgaaagtttgttaatacttgataataataatcttgcacggcaatataatgtacgcgccgcagtcaggaagcttgatttgaccatgggttgcgtttgggtgtttttgccgtacgtgcaggggtttaactgggagtcgtggaggaagcaaggcgggtggtacaactttctgcacgagaaggtggaggagatcgccagcacgggcgccacccacgtctggctcccgccgccgtcgcactctgtctcgccgcagggttacatgccggggcggctctacgacctggacgcgtccaagtacggcacggaggcggagctcaagtcgctgatcgaggcattccacgacaagaacgtcgagtgcctcgccgacatcgtcatcaaccaccgctgcgccgactacaaggacagccgcggcgtgtactgcgtgttcgagggcggcacgcccgacggccgcctcgactggggccccgacatgatctgcagcgacgacacgcagtactccaacggccgcggccaccgcgacaccggcgccgggttcggcgccgcgcccgacatcgaccacctcaacccgcgtgtccagcgggagctcaccgactggctcaactggctcaggaccgacctcggcttcgacggctggcgcctcgacttcgccaagggctactccgcgccgctggcgaggatctacgtcgacaacaccaacccgacgttcgtcgtcggcgagatctggagctcgctcatctacaacggcgacggcaagccgtcgaccaaccaggacgcggacaggcaggagctggtgaactgggtggagggcgtcggcaagccggcgacggcgttcgacttcaccaccaagggcatcctccaggccgccgtgcagggcgagctgtggaggctccacgacggcaacggcaaggcgcccggcctcatggggtggatgcccgatcaggccgtaaccttcgtcgacaaccacgacaccggctcgacccagtcgctctggccgttcccttccgacaaggtcatgcagggctacgcctacatcctcactcaccctggcatcccatgcatcgtaagtatcaccaccgaaatctttctcatcaaattcgttcatattggtgagctcattgctggtgcatgtgtacgtgtgtatgcagttctacgaccatgtgttcgactggaacctgcagcacgagatcgcgacgctggctgaaatccggtcaaggaacgggatccatgcggagagcacgctggacatcctcaaggccgagggggacatctacgtcgccatgatcgacggcaaggtgatcaccaagctcgggccgaggtacgacgccggcgggatcatcccctccgacttccatgtcgtggcgcacggcaacgactactgcgtctgggagaaggaaggcctcagggttcctgccggtagaaagcactattagctttagctatagcgatcgagttgcatggtgctttgcaaccctagataatatatatacgtacgtggctctagctatgaatcatgcaattttgctgcgagatgtgtacgagcgagcttcgatcgatgtacgcttcgttataactagcgttcttcggaaataagtaagcggaatgtaccctgttaatcctgcagaaatgtaggatgaatggaattaactagctactgttcgtttcgatcctcaagaaagacttgcaagatcttgtcagttgacttc</dnaseqindica> |
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