Os08g0478100

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os08g0478100

Description

Protein of unknown function UPF0029 family protein

Version

NM_001068584.1 GI:115476905 GeneID:4345838

Length

2341 bp

Definition

Oryza sativa Japonica Group Os08g0478100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23664753..23667093

Sequence Coding Region

23665263..23665418,23665550..23665603,23665709..23665814,23666039..23666154,23666246..23666287
,23666788..23667093

Expression

GEO Profiles:Os08g0478100

Genome Context

<gbrowseImage1> name=NC_008401:23664753..23667093 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:23664753..23667093 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgtgcgcattgccccacgcctccgctctctcccgctcctgctccccggaccagacgccgccgccaccgccgccgccgtccaccgcagctgctcctcctgtggcggtagcttggccgcgttggcgcctgcccgcctgcgcgccatgtcgtcgtcgtcctcctcctcctccgtctccccctccccgtacacgacgctcgtgggtcgcgtgagctgcgagcgcgagatcaagaagagcaagttcatcgccatcgccgcccccgtccccgacgagcgcgccgccatgtccttcctcaacgaggtcagtgatccccgtgcaacccataattgctgggcgtataagctgggagagcaattccgttacaatgatgatggtgaaccttcaagcaccgctggaaagccaatatactctgccattatttcatctggcattgatatggtcatggtggtggtaatcagatactttggaggcataaaattaggaactggtgggctggtgagagcttatggtggggttgcttctgaatgcctaaaagatgctcctacttgtcttgtaaaaccaaaggctcgtgtgggtatggaggtaccatttgatctcttgggaacagtctatcatcagttgcaacattaccaagctgaagatatcaaacaggactatgacactgggaaagatggtactgttatggtcatgttcaaattggaatatgaaaaaattgagaatcttgggaatgcagtaaattcagcctgcagcaggaaaatagaactactcctataa</cdnaseq>

Protein Sequence

<aaseq>MAAVRIAPRLRSLPLLLPGPDAAATAAAVHRSCSSCGGSLAALA PARLRAMSSSSSSSSVSPSPYTTLVGRVSCEREIKKSKFIAIAAPVPDERAAMSFLNE VSDPRATHNCWAYKLGEQFRYNDDGEPSSTAGKPIYSAIISSGIDMVMVVVIRYFGGI KLGTGGLVRAYGGVASECLKDAPTCLVKPKARVGMEVPFDLLGTVYHQLQHYQAEDIK QDYDTGKDGTVMVMFKLEYEKIENLGNAVNSACSRKIELLL</aaseq>

Gene Sequence

<dnaseqindica>1676..1831#1491..1544#1280..1385#940..1055#807..848#1..306#atggcggccgtgcgcattgccccacgcctccgctctctcccgctcctgctccccggaccagacgccgccgccaccgccgccgccgtccaccgcagctgctcctcctgtggcggtagcttggccgcgttggcgcctgcccgcctgcgcgccatgtcgtcgtcgtcctcctcctcctccgtctccccctccccgtacacgacgctcgtgggtcgcgtgagctgcgagcgcgagatcaagaagagcaagttcatcgccatcgccgcccccgtccccgacgagcgcgccgccatgtccttcctcaacgaggtgcgtccccctccacgcgcgctattatcatctccctcaccgacgccccaaatcgggcaagtcttaagtcttaaccttgagccacagggaactcttgtccgactatgtggcagccaacaatcgccaattttttctttgaagggagagcagacaattgttctataggggaactcgatagtttttcagtgtagtctgcactgtaaagtactaatccatcatcctttagttttagtgtccatacctagctgaagggttcgctcattagctaagttgaatgcgtgctatttcgaatgatataaacttcatctaggatttgcaggtatttcgtttagcgtttcacaagttgtttatgtgaggttaagtttgcagttgtatgtgtacacataatattggtccatttaccttcggcttccagaaaactcatccatgtgaaaattggttttacaattttttttgtgtggtatattatcgattaaatttatgagtctcttttgtaacaggtcagtgatccccgtgcaacccataattgctgggcgtataaggtttgtacatatacctgaatcgtacaacaattcatgctcatgtagtaatgtttgttgatgaaagattggtcttttatacatgtctatttagctgggagagcaattccgttacaatgatgatggtgaaccttcaagcaccgctggaaagccaatatactctgccattatttcatctggcattgatatggtcatggtggtggtaatcaggtaaccgatttgttaagcaaaccatttcatgtaattttaaaattgtgacccacccttttgttgctatttagtgttctactgaattaagtacctcaacttgagcagagataatactgtcactaactgacagatatatgtgtacattaactacaacttttggctagacagatggtttgtgactatttgatactttccatcatattatgatgctatacattgtatagatactttggaggcataaaattaggaactggtgggctggtgagagcttatggtggggttgcttctgaatgcctaaaagatgctcctacttgtcttgtaaaaccaaaggtgataatatctaattcttttgcataagcattttcttggtcattgcaactacgtatgaagcatggacttggtataattattatttaatttctgacttcactttaggctcgtgtgggtatggaggtaccatttgatctcttgggaacagtctatcatcaggtgatgattagtggcttaagcggttccattttctgtaaaaaaaacagtacaactgaatgtgcatttctttcagagacttttttatccttctttctgcagcctaattatgactgcgttgaaccttgaaacagttgcaacattaccaagctgaagatatcaaacaggactatgacactgggaaagatggtactgttatggtcatgttcaaattggaatatgaaaaaattgagaatcttgggaatgcagtaaattcagcctgcagcaggaaaatagaactactcctataagtggaatcatagggttaagtgtgaccatgcagattcaatgttcaggttgtgcctactgcagcctctgttaaccagtgtaagtactaagatattccatatcacatatagtacaaatatttttctttacctttttccctgttttgatattttttttccttgtcatctgatctttaatatatttggcttattatttatttaacttataggcactactactacccctgaaatattcagcctttgactcgacgatagttcttagcagcaacttcagattggagttccccaatgtaaacggcagaatcatgttctactgagattattgatcctccaaacatacatatatattagtttctcatcctgtctaccatctattgtaagttaccaataataacgtcttagtattatactcttgtagcattgatatgttgaaagagatgttatgataacttctccatgatctttatgaccaaattgacattaatttggctgatcttttgattcagctgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0478100, RefSeq:Os08g0478100