Os05g0455600

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0455600| Description = Prenylated rab acceptor PRA1 family protein| Version = NM_001062259.1 GI:115464248 GeneID:4338980| Length = 3669 bp|...")
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Gene Name

Os05g0455600

Description

Prenylated rab acceptor PRA1 family protein

Version

NM_001062259.1 GI:115464248 GeneID:4338980

Length

3669 bp

Definition

Oryza sativa Japonica Group Os05g0455600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22429948..22433616

Sequence Coding Region

22430194..22430351,22431793..22431833,22431911..22431989,22432526..22432612,22432705..22432793
,22432889..22432960,22433050..22433153

Expression

GEO Profiles:Os05g0455600

Genome Context

<gbrowseImage1> name=NC_008398:22429948..22433616 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22429948..22433616 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactggagcgcggtgacggcggaggacctggtggacgcgctgcgggaggtggactggtcgacgccgccgcgccccgtgccggagttcttctcccgcttcaccgtcccccgctcctactccaagtggaccagccgcctcaagtgcaacctctactactacaggacaaattacttcatcttgatcatgttcatccttgggataggcttcatttggaagccggttgctatacttgcagcctttatgactggaatcagcattgcatttcttaatgacagctttgcagtcactttcaatgagaaagtcacgaggactgtcagacaattttcaccacatttagctgcaaaaatgaggccaccaataacccctgttcttcgtggtagaccaagttcaaagaggtcgattcatatttgtgggcgacctcgctggctatttgtgctgttattttctgcagttagttgcatgctctggttgacttcctgcagtctcctcacagttctatgggcccttttaattgctatctttgcaactctgcttcatgctagcttcagaacacctaatctgaaagcacgtctgaatacattcagagaagaattccgagctgtttggaggaattatagtgagctttaa</cdnaseq>

Protein Sequence

<aaseq>MDWSAVTAEDLVDALREVDWSTPPRPVPEFFSRFTVPRSYSKWT SRLKCNLYYYRTNYFILIMFILGIGFIWKPVAILAAFMTGISIAFLNDSFAVTFNEKV TRTVRQFSPHLAAKMRPPITPVLRGRPSSKRSIHICGRPRWLFVLLFSAVSCMLWLTS CSLLTVLWALLIAIFATLLHASFRTPNLKARLNTFREEFRAVWRNYSEL</aaseq>

Gene Sequence

<dnaseqindica>247..404#1846..1886#1964..2042#2579..2665#2758..2846#2942..3013#3103..3206#gattcccctcctctccacgcctccgcggtgtccaaactccagactcccccaaaaaatcccccaaaaccgaagggaaagaggaaaaaaattactcttcgctctcgcgtcgcgcacgacacgaccgagccagcaaagccgcccatccgccatcccgccgctcctgcaatctacagccgcgtcgccgcttgtccgcctgcgctcgttctcgctagggttcggaagggggagggtggggatcgcccggcgatggactggagcgcggtgacggcggaggacctggtggacgcgctgcgggaggtggactggtcgacgccgccgcgccccgtgccggagttcttctcccgcttcaccgtcccccgctcctactccaagtggaccagccgcctcaagtgcaacctctactagtacgatctcccttcctcacttcctaattgcccgtcccacgatttgttgggaacttgggggtttctatgtcgagattggcgttaaatccgagcggatttgagcgcggagcccgattgttggtgttttcagtgaattagtagtggatcgagcacttcttttcctctctagccagtagaatagtagaataagggtatatgcgtgcgcatcgagacctattttgtggtttgatagcccaaggaaatggtgttgtaacgttcaggtaatgtagccatatagtaggtgaatccaacatcgtattatgctcagcatgttcaatggggacaaaaggaatcacataaacggccagtatattaccttattaggctgtgagctagttgtttcgaaatttctgatgaattcatagcatgcgaagtaggttatgcttgtttgtggcatatgatatgttggagtagtatttgatgaaaacacaaaacaaggtttgtaggtttagcttccccaggctaccatcaactatcggttctaattatgttatccatgatatcatgatcttcagcatatttatcatcaactatcgattctgcttagtggcaattttagccaaggcgctaagcgctagttaggcagcagaccagcacctggcacctaattggtgatcatgtggacctaagcaggattggccagccacctagtcaggataactcaataggcaggctaggcgtccgtatatgcaaggaaattgtgcattttgatgtaagagcaaaatttttaattgttaggttaacctgaatcttatttcgttttgtacttgttccggagatgctgggtgttcttgctggagtgctgtactccatgaaatccgtgagatgaacagggtgcattagaatttttatttatttactacttacttaaaaatcagttgaacacagaatctcagattgaagatggtaagtggtgcaaccacagtttttgctgtacttaatgttgagacattaagtgtttctgataactaaagtgattggcaaagtagtgtttctgtcagaaaacatgccatgttgaacatacatctaagtcaaatgttcaaagctgtgagtacgaaaatgttttaaatgtttggggtttgggtttgatacataaaaattcatatctgtagatttatcttgaaagtactgtcagatatttccataaaaaaactttcagatactagagttttattgggttttgcacatattttacgttataattttttgctttttgtattctggagaacgtgcgaatgtccaaaaccacatgttctcattactggatgttgtattaactatcctcctaaaaggcaccaattcatgtgttcagactttttacaagttcctcacgacagatttaagggttgtatagttatcattttatcttgtactgaatttccctcatttatttggtctgcagctacaggacaaattacttcatcttgatcatgttcatccttggtaggcaaaaaaagcttgaatgctgtctcttattcctcattcggttgattttgacatgctgcctttgttatatgcagggataggcttcatttggaagccggttgctatacttgcagcctttatgactggaatcagcattgcatttcttaatgacaggtacaatttacttaactactctctccgttttagaatttaagatgttttggttttgtactaggtcaaacttagataagtttgatcaagttagtacgaaaatgtaataacatctacagcaccaaattaatttcattaaattcaacattgaatataatacaaagccaaaacatctaacattctggaacagagggaataataccatcctttttctctagaaaattcttccatttagatgagtaaagaacaatattttgttttcttaacaaaggtagtgtatctttgagataaaacataattacatcaaatatttgtctaactgtcctgaaatattgctaaggatgtgttgtcttagcactacttccaaaaggattagtgaataatacatctgcaggatgtttttccttgtatcagttgtgatacagttctcaaattccttagtcatctccgtacattattttgtgacaaactgacactgagtgatttacactttgatcataggatgattaatagactaattatcatgtttgatacttcagctttgcagtcactttcaatgagaaagtcacgaggactgtcagacaattttcaccacatttagctgcaaaaatgaggccaccaataacgtgaggattttaatttttcatattctattttctttattttgtcgtgattcaccagagtgtgttattaatactattctcaacatcatcgacagccctgttcttcgtggtagaccaagttcaaagaggtcgattcatatttgtgggcgacctcgctggctatttgtgctgttattttctgcaggtgtgcaccacagcaaattgtcttcgtattatcttatttcacataccatagttttgaaaacctgaagctaatgctttttctatttttatttgcagttagttgcatgctctggttgacttcctgcagtctcctcacagttctatgggcccttttaattgctatctttggtaggatgattgagattttgaattttcaaagatagatatacatcttgggactgcacttatagttcttttttttgtttttttgtttgcagcaactctgcttcatgctagcttcagaacacctaatctgaaagcacgtctgaatacattcagagaagaattccgagctgtttggaggaattatagtgagctttaaggtccgtgtgtatctaaccctacgtttgtgcaggacctcagtttgtctatacctaatgctttatgcgccatttcgtgttgtattgtcactatttggttaaagttggttaaaacttggagcttgtttggtttctctatgcaggttcatgtggtaagaagtgcttagtgctgaaacttcgtgctgtttgtgaattgtgtttgtgggagataccaagatatgaacaatggtgacaggcagctgcgttctattgtgattacttgctcgttttggaggtgggccttgactgtctaagtacatgatgatgttacacttggtacgccaccttccaaatcactataattgttcacatggaattctccctaaccaagcattggaaaaagaacagcatgtaaaggatgtaaacaagtattctaatcaacacagcatatattgtttgttgaaatgtttgtttcatgtttccccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0455600, RefSeq:Os05g0455600