Os05g0456500

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0456500| Description = Protein of unknown function DUF588 family protein| Version = NM_001062267.1 GI:115464264 GeneID:4338988| Length = 20...")
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Gene Name

Os05g0456500

Description

Protein of unknown function DUF588 family protein

Version

NM_001062267.1 GI:115464264 GeneID:4338988

Length

2049 bp

Definition

Oryza sativa Japonica Group Os05g0456500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22471174..22473222

Sequence Coding Region

22471371..22471504,22472245..22472377,22472879..22473079

Expression

GEO Profiles:Os05g0456500

Genome Context

<gbrowseImage1> name=NC_008398:22471174..22473222 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22471174..22473222 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggaggtggcgtggtggaggcccgggacgtggggcgggctggcgatgcgggtggggcaggtcgccttcgccggagcctccatcggcgtcatggcgtccggggccggcttcgccaactacacggccttctgctacttgattgcatcaatgggattacaatcattgtggagcttgggacttgcatgccttgacgtgtatgccttgacagtcaaaagggatctcaacaatgctcttctcgtgagtttgtttgtcattggagactgggtaactgcacttctgtcctttgctgcatcttgctcagctggaggtgttatggttctgtttaaaagggacgtgcttttctgcagaaggtatccacaactgccttgtgggagattcgaacttgctgtagcgcttgcatttttgtcttgggcacttagtgctacatcagccattatcatgttctgtctccttgctgcattctag</cdnaseq>

Protein Sequence

<aaseq>MWEVAWWRPGTWGGLAMRVGQVAFAGASIGVMASGAGFANYTAF CYLIASMGLQSLWSLGLACLDVYALTVKRDLNNALLVSLFVIGDWVTALLSFAASCSA GGVMVLFKRDVLFCRRYPQLPCGRFELAVALAFLSWALSATSAIIMFCLLAAF</aaseq>

Gene Sequence

<dnaseqindica>198..331#1072..1204#1706..1906#attcctccccctttttctcctcctcctcctccgcgagtgtgagcctagaaactgcggcggttttgggcgcgatttggtttccaaccacctcgattggagtgcgccggcggtgatccggttggtccatggccggtggtggaggtaggtgagggggagggcggcggcggcggaggaggaggggtttggggggtcgtgggatgtgggaggtggcgtggtggaggcccgggacgtggggcgggctggcgatgcgggtggggcaggtcgccttcgccggagcctccatcggcgtcatggcgtccggggccggcttcgccaactacacggccttctggtacggtgccctcacgcgttcccgtttgattttggggggcggagtttcgtattttggtggtgttgatccgtgtagtgtgtcgtctcgtcccctctcttcgcctggagcaatgcgagttgatgatggcagatttggtgggtaatttcggttggggcgcagtgaagagcatgaattttgcgctcgatggttttggaacaattagtgagtaattggcttgcggccttccaaaattgggtagtgaggagtggatgattcacaaggagcttagctaattgcgagtagaatcgtagaaatgagggcctttcactatcaaatggcagctgtgcgttagctgggaatgtggtttacaagttacaacctctaataagatctgaaaaaaaattatgaagctatcactatactatccagttgtttatgttcacgaggtatgtgtacatgtcataacttataacattggcttttgttgttaatgctggttatatcggcattcggcaaagataattgataatcccctttggtttatgctctgtttcctatttttcatatgatgcatgtggatttggtgtaccttaatcattcgtattacaattctagtgcagtgatgacctttttcttggtaactttgtatttagtcggttttagtaggcaccggtacaacggtccttcctgtattcgcaccctctttggcgcaatcttcctttgaatcatgtaatgagtttgttgtggctttcaaatttcagctacttgattgcatcaatgggattacaatcattgtggagcttgggacttgcatgccttgacgtgtatgccttgacagtcaaaagggatctcaacaatgctcttctcgtgagtttgtttgtcattggagactgggtaatgattaaactctgtaactctatcacttatcacttaacttgttgccttggattttttttttgtttgatccaaaattttttagatcagctccactagattgtttgtgatagttaggcacatcctatatggtgttacacttcctactggagcaaacaccacagaagtgccatttagagggtacaatagaataggttaggcaacttctgttgattgctgtgccttttattttctgaagataactgattgctgcaatatagtgcattctactattatatggcaagagggagcttggtttgttgtagttctctttattttctatataaaaatactattgtttgacatggaaatctatgttgtttgcatggtatgcaacctggtttggattgagttttcaatcaaattgcgacattttttgagcaattggggtgtcattcatgcaaccacgtttataattcacagacttcagcagcataaattgactccatctatttgatgcaggtaactgcacttctgtcctttgctgcatcttgctcagctggaggtgttatggttctgtttaaaagggacgtgcttttctgcagaaggtatccacaactgccttgtgggagattcgaacttgctgtagcgcttgcatttttgtcttgggcacttagtgctacatcagccattatcatgttctgtctccttgctgcattctagtcttgcatataatcctgtgtaagttctgtttatagtgctgccttttttctgttttatcttgttagctttgattttgtataggatcattttcaagaatatgtagtgaaccacacgaccgaaaagtggaaatgctggggaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0456500, RefSeq:Os05g0456500