Os08g0503700

From RiceWiki
Revision as of 20:52, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0503700

Description

Sodium/sulphate symporter family protein

Version

NM_001068710.1 GI:115477157 GeneID:4345968

Length

3012 bp

Definition

Oryza sativa Japonica Group Os08g0503700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24971260..24974271

Sequence Coding Region

24971357..24972317,24972810..24972853,24973052..24973147,24973246..24973756,24973863..24973897

Expression

GEO Profiles:Os08g0503700

Genome Context

<gbrowseImage1> name=NC_008401:24971260..24974271 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24971260..24974271 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagaacggcagcagctacggcgagagctcgtcggacgacgtggaggcgccgctgctgctgccggcggcgaggggcgggacgatggcgaagggtgatcgtcgacgtccggcgtcgtcggcggcggcggcgtgggtgcgcgctctgctcgcgcacaagtacccggcgatcgcggcggggccggcggcgtgcgcggcggtgtgcgccgccgtggacctcggggacgggcacggcgaggcgcggaacatgctgggcgtgctggcgtgggtgttcctctggtgggtcaccggcgccgtgccgctcgccgtcgcgtccatggcgccgctgttcctcttcccggccctggggatctcctcctccgacgacgtcgccagggcgtacatgggcgacgtcatctccctcgtcctcggcagcttcatcctcgccctcgccgtcgaccaccaccgcatccaccgccgcctcgccctcaacgtgctgtccctcttctgcggcgatccggtgcggccgtcgctgctgctcctcggcgtcaccggcacgaccgcgctcgtcagcatgtggatccacaacacggcgtgcacggtcatgatgatgccggtggcgacggggatcctgcagaggttcccccgcggcgacatcgacgacggcggcgggcaggaggtgcggcgattctccaaagcggtggtgctcggcgtggtgtacgcgtcggcgatcggcggcatggcgacgctgaccggcaccggcgtgaacatcatcctggtggggatgtggtcgtcctacttcccggagcagaggcccatcaccttcagctcatggatgtccttcggcctccccatggcgatcatcctcttcctcgcgctctggctcaccctctgcctcatgtactgctccaacaacaccgccaaggccctctccgcctacctcgacagaagccatttgagacgagagctcagcttgttaggtccaatggcttttgcagagaagatggtcttggctgtgtttgggggcctagttgtgctgtggatgagtaggaacataacagacaacatccctggatggggagttcttttccacaataaagttggggatggcacagttactatcatgatggccacccttctgttcataatccccagcgggaagagggagggtgagaagctgatggactggaacaagtgcaagaagatccagtggaacatcatccttctcctcggcgcaggattcgccattgccgatggcttcaagacgagcggcctcaccgacatcctctccaacggcctcaggttcctgaaaggggcgccgacgctggtgatcgtgcctgtcgcctgcgttttcagcgggatcatgacagagttcacttctgacgactcaaccacgacgctggtgctgccattgttcgctgaacttgccaaatccattgaggtgcaccctgccttgctcatggtttccggcgcaatcggggcccagttgtcatacttgttgcccaccggatcgccgtcaaacgttgtcggcttcagcaccggctacattaccatcaaggatctggtggccactgggttgcccctgaaaattgttgccattgcagctctgacagtcttactgccaacattaggatcaacgatttttggcatggacatcaagtcatag</cdnaseq>

Protein Sequence

<aaseq>MDKNGSSYGESSSDDVEAPLLLPAARGGTMAKGDRRRPASSAAA AWVRALLAHKYPAIAAGPAACAAVCAAVDLGDGHGEARNMLGVLAWVFLWWVTGAVPL AVASMAPLFLFPALGISSSDDVARAYMGDVISLVLGSFILALAVDHHRIHRRLALNVL SLFCGDPVRPSLLLLGVTGTTALVSMWIHNTACTVMMMPVATGILQRFPRGDIDDGGG QEVRRFSKAVVLGVVYASAIGGMATLTGTGVNIILVGMWSSYFPEQRPITFSSWMSFG LPMAIILFLALWLTLCLMYCSNNTAKALSAYLDRSHLRRELSLLGPMAFAEKMVLAVF GGLVVLWMSRNITDNIPGWGVLFHNKVGDGTVTIMMATLLFIIPSGKREGEKLMDWNK CKKIQWNIILLLGAGFAIADGFKTSGLTDILSNGLRFLKGAPTLVIVPVACVFSGIMT EFTSDDSTTTLVLPLFAELAKSIEVHPALLMVSGAIGAQLSYLLPTGSPSNVVGFSTG YITIKDLVATGLPLKIVAIAALTVLLPTLGSTIFGMDIKS</aaseq>

Gene Sequence

<dnaseqindica>98..1058#1551..1594#1793..1888#1987..2497#2604..2638#ttttaagtgtcgccctagctgctataaaaccagccgagacgaggcgagctgaggccaaccacggcggcggcggcgaacgatccatcagttcatcggcatggacaagaacggcagcagctacggcgagagctcgtcggacgacgtggaggcgccgctgctgctgccggcggcgaggggcgggacgatggcgaagggtgatcgtcgacgtccggcgtcgtcggcggcggcggcgtgggtgcgcgctctgctcgcgcacaagtacccggcgatcgcggcggggccggcggcgtgcgcggcggtgtgcgccgccgtggacctcggggacgggcacggcgaggcgcggaacatgctgggcgtgctggcgtgggtgttcctctggtgggtcaccggcgccgtgccgctcgccgtcgcgtccatggcgccgctgttcctcttcccggccctggggatctcctcctccgacgacgtcgccagggcgtacatgggcgacgtcatctccctcgtcctcggcagcttcatcctcgccctcgccgtcgaccaccaccgcatccaccgccgcctcgccctcaacgtgctgtccctcttctgcggcgatccggtgcggccgtcgctgctgctcctcggcgtcaccggcacgaccgcgctcgtcagcatgtggatccacaacacggcgtgcacggtcatgatgatgccggtggcgacggggatcctgcagaggttcccccgcggcgacatcgacgacggcggcgggcaggaggtgcggcgattctccaaagcggtggtgctcggcgtggtgtacgcgtcggcgatcggcggcatggcgacgctgaccggcaccggcgtgaacatcatcctggtggggatgtggtcgtcctacttcccggagcagaggcccatcaccttcagctcatggatgtccttcggcctccccatggcgatcatcctcttcctcgcgctctggctcaccctctgcctcatgtactgctccaacaacaccgccaaggccctctccgcctacctcgacagaagccatttgagacgagagctcagcttgttaggtatacgtgacatcccgtttcttgatactatctactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattttttctctatcatttgattaattgttaaatatatacttttatgtatacatatagttttacatatttcacaaaagtttttaataagacgaatggtcaaacacgtttaaaaaagtcaacagcgtcaaatatttaggcacagagggagtatatccgttccaaaatattgctacctagaacataaaaaatgtgtttacctttggttgtatatcactgctaaaaagttgacaattgacctgtggtcatcacttggataattctgattgggctaagtatttttctgcctcaacagttgattaataacagccacaaattcagtatctaattctaagtccatgattgtctgatgaggtgtcatgatctatgacaggtccaatggcttttgcagagaagatggtcttggctgtgtttggggtaaaattctatttctattttttttttctaatccaacactagctatgttctgattttatgaccataaatttcaatatgaagaatatgcagggtttggtttctgtcatacaaattgaaactgattatttgtgctatcttggtaaaactaactgaaatggacccttttttttttcttttttttcttttttttttttgcagggcctagttgtgctgtggatgagtaggaacataacagacaacatccctggatggggagttcttttccacaataaagttggggatggcacagttactgtaagtgctaaaataatcacaaagacaaaaattactgggctagcgagccagttgcatttacctgatcttatacagaagcaaatcactttgcaatgcagatcatgatggccacccttctgttcataatccccagcgggaagagggagggtgagaagctgatggactggaacaagtgcaagaagatccagtggaacatcatccttctcctcggcgcaggattcgccattgccgatggcttcaagacgagcggcctcaccgacatcctctccaacggcctcaggttcctgaaaggggcgccgacgctggtgatcgtgcctgtcgcctgcgttttcagcgggatcatgacagagttcacttctgacgactcaaccacgacgctggtgctgccattgttcgctgaacttgccaaatccattgaggtgcaccctgccttgctcatggtttccggcgcaatcggggcccagttgtcatacttgttgcccaccggatcgccgtcaaacgttgtcggcttcagcaccggctacattaccatcaaggatctggtggccactgggttgcccctgaaaattgttgccattgcagctctgacagtcttactgccaacattaggtaacattcctgcacagatcaacattaaggattagtcagtagttagtaacttactgttgttttctgacttaatctaatgcttttttttgttaatttgatcgttcaggatcaacgatttttggcatggacatcaagtcataggaacataaatatgaagtttttgagaatgtacagtagtttctgtttctgtatctcatgcctgaactattgttgaggggtcagatggcatggtttgtataagagtaaccatagggatttctcagccgttctgtattactgtatctgagacgtgccccgggagatcagatttcttgtcaagacagaagcaaggaagacaagcagacaatagaagaatgatcaaaatgaaacgtattcaaacaatccatatccttcagatgagcgtacaatatgcaggtcttatcctctagaggtgctatagcttattgttcttcacaaaatatgtaaagttaaaagagtgtcggcatatatattaaattgaacagaatatgtggtac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0503700, RefSeq:Os08g0503700