Os05g0457800

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0457800| Description = Similar to Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15) (AtGPAT5)| Version = NM_001062276.2 GI:297604612 Gene...")
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Gene Name

Os05g0457800

Description

Similar to Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15) (AtGPAT5)

Version

NM_001062276.2 GI:297604612 GeneID:4338997

Length

2493 bp

Definition

Oryza sativa Japonica Group Os05g0457800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22527540..22530032

Sequence Coding Region

22527540..22528154,22529079..22530032

Expression

GEO Profiles:Os05g0457800

Genome Context

<gbrowseImage1> name=NC_008398:22527540..22530032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22527540..22530032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaccatgtcggcgtcggcggaggcgaagagtcgacgggagaggcggtcggtggtggcggagctggagggggcgctgctgcgcgacgcggcgacgttcccgtacttcatgctggtggcgttcgaggcgtccgggctgccgcggttcgcggcgctgctggcgctgtggccgctgctgtgggcgctggagcgggcgctggggcggggcgacctggcgctgcgcgccgcggcgttcgtggcgacagcgggcgtgccgcgcgcggaggtggaggccgtggcgcgcgccgtgctgcccaagttcatggccgacgacgtcgacccggcggcgtgggcggcgttcgggtcctgcggcgggcggcgcgtcgtggtgacacgcatgccccgggtcatggtggagcggttcgccagggagcacctcggcgcgcacgaggtggtcggctgcgacctcgagtacagccgcctcaggcggtccaccggcttcgtcaggggcggcggcggcggcgagcgcgcggtcgccgaacgcgtgcgcgcgctcttcgccgatggcgaccggccggacgtcgggatcgcgcggtccgagtcggcgacgcgatccttcttgcccttctgcaagaagcaactccggccgccgttctgtgaggacgacggcgacgacgtcgccgccgccggcgagcagcacaaatgccctccgttccggccagtcatcttccacgacggccgcctcgtgtgccggcccacgccgctcatgtcgctcgtcatcctcctgtggcttccgcttggcgcgctcgtcgccttcgtccgcatcgccgtcggcatctccgtgcccatccagatcatcccccgcatcgcgccctacttcggcggcgccgtcgtcgtgcacggcgccccgccgcccgccgccgccagcgggccggcgtccggcgtcctcttcgtgtgcacgcaccggacgctgatggacccggtggtgctcgccaccgtgctcggccgccgcgtggccgccgtgacgtactccatctcccgcctctcggaggtcctctcgccgatcccgacggtgcggctgacgcgcgaccgcggcgtggacgcggcgcagatgcgcgccgagctgtcgcgcggcgacgtcgcggtgtgccccgaggggacgacgtgccgggagcccttcctgctccgcttctccgcgctgttcgccgagctcagcgaccggatcgtgccggtggcgatgaactaccgcgtcgggctcttccacccgacgacggcgagggggtggaaggccatggaccccatcttcttcttcatgaacccgaggccggtgtacgaggtgaccttcctcaaccagctccccgccgaggagacgtgcgccgccggcaagagcgccgtcgacgtcgccaactacgtgcagaggatactcgccgccaagctcgggttcgagtgcaccaccttcacgcgcaaggacaagtaccgcgtgctcgccggcaacgacggcatcgtcaacgtcaagccgccggcggcggcggatccggcgccgtggcagcgccgcctcaaggaggttctcggcttcttgctccactaa</cdnaseq>

Protein Sequence

<aaseq>MVTMSASAEAKSRRERRSVVAELEGALLRDAATFPYFMLVAFEA SGLPRFAALLALWPLLWALERALGRGDLALRAAAFVATAGVPRAEVEAVARAVLPKFM ADDVDPAAWAAFGSCGGRRVVVTRMPRVMVERFAREHLGAHEVVGCDLEYSRLRRSTG FVRGGGGGERAVAERVRALFADGDRPDVGIARSESATRSFLPFCKKQLRPPFCEDDGD DVAAAGEQHKCPPFRPVIFHDGRLVCRPTPLMSLVILLWLPLGALVAFVRIAVGISVP IQIIPRIAPYFGGAVVVHGAPPPAAASGPASGVLFVCTHRTLMDPVVLATVLGRRVAA VTYSISRLSEVLSPIPTVRLTRDRGVDAAQMRAELSRGDVAVCPEGTTCREPFLLRFS ALFAELSDRIVPVAMNYRVGLFHPTTARGWKAMDPIFFFMNPRPVYEVTFLNQLPAEE TCAAGKSAVDVANYVQRILAAKLGFECTTFTRKDKYRVLAGNDGIVNVKPPAAADPAP WQRRLKEVLGFLLH</aaseq>

Gene Sequence

<dnaseqindica>1..615#1540..2493#atggtgaccatgtcggcgtcggcggaggcgaagagtcgacgggagaggcggtcggtggtggcggagctggagggggcgctgctgcgcgacgcggcgacgttcccgtacttcatgctggtggcgttcgaggcgtccgggctgccgcggttcgcggcgctgctggcgctgtggccgctgctgtgggcgctggagcgggcgctggggcggggcgacctggcgctgcgcgccgcggcgttcgtggcgacagcgggcgtgccgcgcgcggaggtggaggccgtggcgcgcgccgtgctgcccaagttcatggccgacgacgtcgacccggcggcgtgggcggcgttcgggtcctgcggcgggcggcgcgtcgtggtgacacgcatgccccgggtcatggtggagcggttcgccagggagcacctcggcgcgcacgaggtggtcggctgcgacctcgagtacagccgcctcaggcggtccaccggcttcgtcaggggcggcggcggcggcgagcgcgcggtcgccgaacgcgtgcgcgcgctcttcgccgatggcgaccggccggacgtcgggatcgcgcggtccgagtcggcgacgcgatccttcttgcccttctgcaaggtactaccacgtacacaccgtgcacgaacactcccggaactcgtccaaaccactaattaatctgcatcatatagcaaaaaactactgaatttgattatagtcagcaattttttttcataaatttgacagtgatttaaaagtgtcaatggagggagtagtagtatactagaacacgcacttgatcgatggagcaattaatgtgcgccattttcctaggaagaaaaaataatgtgtatattttcctaggagtagagctttagaggtgcttgcccataagcatgcgcgtcggtacatgttcccgtctaatatgtgcatggaatttgggcatatgcatgcatggacgaggatgaaccataccacaactaaatgcctagctagattaattctgaaagtcgtttacgcatgtgaccgccacagccacaagagtcaaacttaacccatcaatccatgatgcatctccaaatctgtgttcgatatactccacaacatgcaactcggtgcacatgaaaggatgtcatgatagtcggcaaaagttctttaaaaaataacccaagttgtcgggacaaatttagacgaataaattagtagtttagtactcgtgtcacaaaatttaaatttgactgtagaaattactatgtacgtatactcgtacatagtgagtgatcacgtgaaccttacatgtagaagtgtgtgtctctgtgtgtgcgcgctaagccatagctttcatctgaataactctgtttgaaaattgaaatgcgcatcgctattgtggttttaatttgtggccaaatacgcatcacttttctccaataattatgttaaatcgtggctcgttcaggtgttaattatcatgctatagttttgttgggaccaacatggcgagaaaccgcgaattaaacctgtaatttgattacgtgcatgcagaagcaactccggccgccgttctgtgaggacgacggcgacgacgtcgccgccgccggcgagcagcacaaatgccctccgttccggccagtcatcttccacgacggccgcctcgtgtgccggcccacgccgctcatgtcgctcgtcatcctcctgtggcttccgcttggcgcgctcgtcgccttcgtccgcatcgccgtcggcatctccgtgcccatccagatcatcccccgcatcgcgccctacttcggcggcgccgtcgtcgtgcacggcgccccgccgcccgccgccgccagcgggccggcgtccggcgtcctcttcgtgtgcacgcaccggacgctgatggacccggtggtgctcgccaccgtgctcggccgccgcgtggccgccgtgacgtactccatctcccgcctctcggaggtcctctcgccgatcccgacggtgcggctgacgcgcgaccgcggcgtggacgcggcgcagatgcgcgccgagctgtcgcgcggcgacgtcgcggtgtgccccgaggggacgacgtgccgggagcccttcctgctccgcttctccgcgctgttcgccgagctcagcgaccggatcgtgccggtggcgatgaactaccgcgtcgggctcttccacccgacgacggcgagggggtggaaggccatggaccccatcttcttcttcatgaacccgaggccggtgtacgaggtgaccttcctcaaccagctccccgccgaggagacgtgcgccgccggcaagagcgccgtcgacgtcgccaactacgtgcagaggatactcgccgccaagctcgggttcgagtgcaccaccttcacgcgcaaggacaagtaccgcgtgctcgccggcaacgacggcatcgtcaacgtcaagccgccggcggcggcggatccggcgccgtggcagcgccgcctcaaggaggttctcggcttcttgctccactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0457800, RefSeq:Os05g0457800