Os08g0510300

From RiceWiki
Revision as of 20:52, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0510300

Description

K+ potassium transporter family protein

Version

NM_001068740.1 GI:115477217 GeneID:4345999

Length

5025 bp

Definition

Oryza sativa Japonica Group Os08g0510300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25401551..25406575

Sequence Coding Region

25401614..25401814,25401956..25402178,25403177..25403422,25403883..25403933,25404051..25404311
,25404406..25404458,25404539..25404908,25405315..25406129

Expression

GEO Profiles:Os08g0510300

Genome Context

<gbrowseImage1> name=NC_008401:25401551..25406575 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25401551..25406575 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtaccaccaccggccgcattcgccgccgccgtcggacgacgacgtcgtcgtcatccagatgaacgccgccgccatcgccgccgtcgacgagtggagctccaccaacgaggtggacgacgccgccgccggcaagggcggcggcctcacccgccggaccttcagccaggcctacaagatgaagcaccggacgccactggagttcacgtggaggcaggtggcgttgctgagcttccagtcgctgggggtggtgtacggagacctggggacgtcgccgctgtacgtgttctcgtcgatctcgctggacgaccccggcgaggcggacttcgtcggaatcctcagcatcatcctctggaccttcaccatgatctgcctcgtcaagtacgtcttcatcgtcctcaaagctgacgaccatggagaaggtggcacttttgcgctgtactcgcttctgcgtcagcatgtgaatttcaagggaaacatgccagtgccagtcacacacttggcatctgacatcaacctcaagttccacagtaagaagaggattctgacgtccaagctcctcaagttcttggaacaaagcacaaaatggcaggcagtcattacctacatcgtgcttgctgggacttgcatggtgctaggagatggtgccctcactccagccatctcagttctgtcagctgttcaaggaatccaatcaagatcttcaagcataacacaagctcatgttgtgttgctatctgtgattatcttgttcatactattcttcttccaaaaacatggcacaagcaaagtcagcttcactttttctcccattatgatcttgtggtttacattcgttgcattcattggattgtacaatatcatcaagcactatccaccaattctgaaagctgtgtcgccccattacataatcatatacttcataaggaacaaaagagcggcctgggagacacttggagcaattgttctatgcataacaggtgctgaagctatgtttgctgacttgggtcatttcaacaaatcatcaatccagatggcattttcagtcatagtttatccatcaatgatccttgcgtatgccgggcaggcagcatttttggtcaagaacccttcaaagctcagcacgacgttctacagtagtactccagagccactattttggcccatgtttatcatagcaactttggctgctattgttgcgagccaagcattgatatcagccagcttctccatcattcgacaatcaattgctttgggttgttttccaagagttaccatgaagcatacctcaggcaaacatgaaggccaagtatactctccagagatcaattactttttgatggttgcgtgcatcttaattactgttgggtttaagggtggaccagagatagggcaagcctttggcgtggcagtgatatttgttatgctttttacaacaaacctgatgacagtggtcatgcttataatatgggaaagtaacattgcacttgccagtctattttttgtttttttcttttccatcgaaggcatttacatgacctcgttaatgaacaagattctacaaggtggctgggttccatttgccattactgcatttttcctgataattacactatcttggacttatggaagaagtaagaagggtgaatatgaacttgccaatgtgatggaaagggaggaatttattaagacagtaacaacgagaagccgagtacctggagtatgcatcttctgcacggatatgatgaatggcatcccgccgattgtgcgccattatgttcagcatgtggcttccctccgtgaactgatggtgtttgtcactatcagggttcttccggtgagaactgtccttcctgaagagcgcttcatcatagacaagctagagccagtgggtgtctacaggtgcatagtccaatatggctatatggacaaccacaatatggagggtgacgattacgttgcatcagttattgcatccctcaaggaaatagctgagaatgatgatgagattctggtgttggattcagctttgataaatggatcaacctttgttcttggcaggactatcataaagatgggaactaggcacaactgtttgaagcgcttttttattaataacctttacaggttcttgcaaaagaacttcagatccaacatgtccagtctaaagataaatcctggtaaaaccttgcaagttggaatgctatatgagatttga</cdnaseq>

Protein Sequence

<aaseq>MEYHHRPHSPPPSDDDVVVIQMNAAAIAAVDEWSSTNEVDDAAA GKGGGLTRRTFSQAYKMKHRTPLEFTWRQVALLSFQSLGVVYGDLGTSPLYVFSSISL DDPGEADFVGILSIILWTFTMICLVKYVFIVLKADDHGEGGTFALYSLLRQHVNFKGN MPVPVTHLASDINLKFHSKKRILTSKLLKFLEQSTKWQAVITYIVLAGTCMVLGDGAL TPAISVLSAVQGIQSRSSSITQAHVVLLSVIILFILFFFQKHGTSKVSFTFSPIMILW FTFVAFIGLYNIIKHYPPILKAVSPHYIIIYFIRNKRAAWETLGAIVLCITGAEAMFA DLGHFNKSSIQMAFSVIVYPSMILAYAGQAAFLVKNPSKLSTTFYSSTPEPLFWPMFI IATLAAIVASQALISASFSIIRQSIALGCFPRVTMKHTSGKHEGQVYSPEINYFLMVA CILITVGFKGGPEIGQAFGVAVIFVMLFTTNLMTVVMLIIWESNIALASLFFVFFFSI EGIYMTSLMNKILQGGWVPFAITAFFLIITLSWTYGRSKKGEYELANVMEREEFIKTV TTRSRVPGVCIFCTDMMNGIPPIVRHYVQHVASLRELMVFVTIRVLPVRTVLPEERFI IDKLEPVGVYRCIVQYGYMDNHNMEGDDYVASVIASLKEIAENDDEILVLDSALINGS TFVLGRTIIKMGTRHNCLKRFFINNLYRFLQKNFRSNMSSLKINPGKTLQVGMLYEI</aaseq>

Gene Sequence

<dnaseqindica>64..264#406..628#1627..1872#2333..2383#2501..2761#2856..2908#2989..3358#3765..4579#ttgctatagctaggtcaaatcgatcgatctcgatcgatcgggtggtcgatccgatcagcagccatggagtaccaccaccggccgcattcgccgccgccgtcggacgacgacgtcgtcgtcatccagatgaacgccgccgccatcgccgccgtcgacgagtggagctccaccaacgaggtggacgacgccgccgccggcaagggcggcggcctcacccgccggaccttcagccaggcctacaagatgaagcaccggacgccactggtaaatacgcagtccatttccgctgatttcatgcgccattcttggtgttcttctcctccttttgtcgatcgattcgatctgcggtttgtggttgatgtgatcgatcgatctgtggattgggatttggggaaaaaattgcaggagttcacgtggaggcaggtggcgttgctgagcttccagtcgctgggggtggtgtacggagacctggggacgtcgccgctgtacgtgttctcgtcgatctcgctggacgaccccggcgaggcggacttcgtcggaatcctcagcatcatcctctggaccttcaccatgatctgcctcgtcaagtacgtcttcatcgtcctcaaagctgacgaccatggagaaggtatatatctgcactatacactccgtactcgtaaaggaagttgttttggactgtgacacggtctccaaaacacaactttgacttcttttttctataaaaatatttattgaaaagtgatatatgtatacctttatgaaagtatttttcaagacaaatctactcatataatttttacattttcaaactcaacgacttgagtgttattcatgatttatattaccaaggtttgacttaaacattgccctaaacgattttctttatgagtatggtgggagtatatcactatatatagatatataattcggatctatttgccaatcacttcttttttactactagatcaacgctcaacaattcgcgtgtcaatccttttattgtcatggaataaccttttgttggaagaaaactgtattttggtgtaccttgataagtatagaagtgcatccgtcccaaaatacagaaatctaggattgaatgagacatatcccagaactatcaatctaaacatacatatgtctatattaataatcataagatatgtctcatctggttctagatttttatattttgggacgaaaagagtagtagatgaaaaacaagaaaatcacaagttacactaaattttagattgtgcaggtttagtgtgttacacgtttaatatactaatagagccgaccgacaaatagcaaaattgaagtaaatcatttagtattaattttcctcaataatttttacaaaaacatcatgccattttaaacatacgtgcggtgaaactttcgaaacatataatatcaatatctctcttttttttcaaaattatgactggatacatgaaaatcatacagatagattgatccatctataataatctcccaattttataaggcttagattgatcatctataatctcctaattttatagggcttctcgagtgcatgttctttcattcaattctcctaattttgtgatatatttgtgcttaattatcctgtgaaaggtggcacttttgcgctgtactcgcttctgcgtcagcatgtgaatttcaagggaaacatgccagtgccagtcacacacttggcatctgacatcaacctcaagttccacagtaagaagaggattctgacgtccaagctcctcaagttcttggaacaaagcacaaaatggcaggcagtcattacctacatcgtgcttgctgggacttgcatggtgctaggagatggtgccctcactccagccatctcaggtgtgcatatcatatccagccttttctgattaggcacttataaagagtgtaggataatagtgtatatttttgtgaagttgttagcatctcaacagacgaaatgaaatggtcctgttcactctgatgtctaccttaccaaattttagtaatgccaaaattttacatgttgcggttgtgatgtgtaagtagtttttagtttgcaatctttgtcaagattttgagagagattctagaactaccaaacttttagtggagttaatttttaacagtgcttagtttgttactttgccaaattttggtaaagccaaaatttgatagggttaattttgacaacaaagggaacagcctcgaggtgttgtagggagcagtttttgtgccatgctagcatgtagtttgcagatcaattttcattgaatttgaatgccctgatgcatgtttctttcttaaaaaatgtattcagttctgtcagctgttcaaggaatccaatcaagatcttcaagcataacacaaggtaacaactagttgtttcttcacctttgtattgccaaccattataatttagatagtggcattctttcgcatggctagagaataaaaaataaactgacattccttctcattgtttcagctcatgttgtgttgctatctgtgattatcttgttcatactattcttcttccaaaaacatggcacaagcaaagtcagcttcactttttctcccattatgatcttgtggtttacattcgttgcattcattggattgtacaatatcatcaagcactatccaccaattctgaaagctgtgtcgccccattacataatcatatacttcataaggaacaaaagagcggcctgggagacacttggagcaattgttctatgcataacaggttagtaatatatcgagagaaaaaaaaaacatctactagttttgcttctggccaattaatctactaatgactaaacagctgtactcataatcaggtgctgaagctatgtttgctgacttgggtcatttcaacaaatcatcaatccaggtacatgcatggtcattaaattttaaatataataacataagtacttaccgtgatcttgaactttaccctgtatcctgcagatggcattttcagtcatagtttatccatcaatgatccttgcgtatgccgggcaggcagcatttttggtcaagaacccttcaaagctcagcacgacgttctacagtagtactccagagccactattttggcccatgtttatcatagcaactttggctgctattgttgcgagccaagcattgatatcagccagcttctccatcattcgacaatcaattgctttgggttgttttccaagagttaccatgaagcatacctcaggcaaacatgaaggccaagtatactctccagagatcaattactttttgatggttgcgtgcatcttaattactgttgggtttaagggtggaccagagatagggcaagcctttggtaagcaatctaatcatatatactcttgccatttctaattgttaatttctcttttactttttgtatgaaaatgttgtagttgcagagacttcaaactcatgaaaaagggctaaattgcacccaacacataacattataaatgtttttaacatacatatgtgctcgtgtgtggttggttgtcaaaacacagatgggtattgcataaaattaaaaaaaaaagtattctatagaaaagccatgtctaaccagttggaattatcaagttactagaaacaccactgctggtaccatagaaacatcaaggagagcacatctctatttggacagatgtaaatgacaatactatgtgctaaaaattaacacacatttgttgtcaccagactgaataatttcttatggtctgcaggcgtggcagtgatatttgttatgctttttacaacaaacctgatgacagtggtcatgcttataatatgggaaagtaacattgcacttgccagtctattttttgtttttttcttttccatcgaaggcatttacatgacctcgttaatgaacaagattctacaaggtggctgggttccatttgccattactgcatttttcctgataattacactatcttggacttatggaagaagtaagaagggtgaatatgaacttgccaatgtgatggaaagggaggaatttattaagacagtaacaacgagaagccgagtacctggagtatgcatcttctgcacggatatgatgaatggcatcccgccgattgtgcgccattatgttcagcatgtggcttccctccgtgaactgatggtgtttgtcactatcagggttcttccggtgagaactgtccttcctgaagagcgcttcatcatagacaagctagagccagtgggtgtctacaggtgcatagtccaatatggctatatggacaaccacaatatggagggtgacgattacgttgcatcagttattgcatccctcaaggaaatagctgagaatgatgatgagattctggtgttggattcagctttgataaatggatcaacctttgttcttggcaggactatcataaagatgggaactaggcacaactgtttgaagcgcttttttattaataacctttacaggttcttgcaaaagaacttcagatccaacatgtccagtctaaagataaatcctggtaaaaccttgcaagttggaatgctatatgagatttgaagaaggtgaccaattgtggatgcataaatgtgaagtgttagctagaatgctagattgctgaaattggcagacagacaagtttttcttgattataaatgtcacagaattgtttggatgtgacccatattttcttagcatgcaaaccatctgcaataattgtcctgtgagtagatgaccaagttatatacacttttgggataattttattagtgggatgcaattctctttttttctcccctaatatttcacactctaaactgcaccaacttgtaggctggttagtgaatggtaaagaaaaaatgttgcacagtgtgcaatttatgtacacataccattctcatttattttccagttgtattttgataagatggttatctaaatcatattctttggtgaaagtgtaaacctccttgtaaaacaatatagatcttaatgttgcaatgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0510300, RefSeq:Os08g0510300