Os05g0458100

From RiceWiki
Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0458100| Description = Similar to FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0458100

Description

Similar to FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506 binding protein) (FKBP59)

Version

NM_001062278.1 GI:115464286 GeneID:4339000

Length

2519 bp

Definition

Oryza sativa Japonica Group Os05g0458100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22538284..22540802

Sequence Coding Region

22538508..22538652,22538944..22539036,22539113..22539192,22539281..22539414,22539722..22539830

Expression

GEO Profiles:Os05g0458100

Genome Context

<gbrowseImage1> name=NC_008398:22538284..22540802 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22538284..22540802 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagaggttgcagatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgctatagctccaactgatagtcttcccttggttgatgttcattatgaaggcacactcgctgaaaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgggcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggttggtgaagttgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagattccacccaatgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaaggttcaagcctgggcagtgtttctgatgagaaagccaggctagaggaactaaagaagcagcgagagctagctgctgccaccaaggaggaagagaaaaagaagagggaagaagcgaaggctgctgcagcagctcgtgtccaagccaaacttgacgcgaagaaggggaagggaaaaggaaagggaaaatag</cdnaseq>

Protein Sequence

<aaseq>MAEVADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLA ENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSP PEIPPNATLIFEVELVACRPRKGSSLGSVSDEKARLEELKKQRELAAATKEEEKKKRE EAKAAAAARVQAKLDAKKGKGKGKGK</aaseq>

Gene Sequence

<dnaseqindica>2151..2295#1767..1859#1611..1690#1389..1522#973..1081#ggggaggcatcccattcgcatcactatcttcccaatctcgcgaataatcgagagagagagagagagagagagagagaggcgacgagacggcgattgctcggttctcccgcgggcggcggcgagccggcgagggcttctccggtggggggcggcgagctatcctagcgcccgccttgggagcgctctcgcggtacgtgtctgctgttgccccccagctggctcgattggctcttttcgattcgggcgtgttccaatctggtgtaccttgaacagttcgatttcgcgagcgatcttccgtgagggtatatgccgcgagacccccgctgtttggtctatccggcttgttttactgccccgaatgatgcccaatggaactttgcaacgagggattcgcggttctgtatcatgataacacgcatggaatgctagaaggtgtaggtctgtattaggcttgttggttggggaggagcagcaacgtctgatcacacgtccacagcagtggcaaccttttggttgcatcaatgcagtcccagttaggcgatagttggattgggtgtatttaggagagactgggattggtctatgtgttttccttcagaaaaggaaagtgacatacctgattatgctgctgtggggagtgcagaatgagtgtcatgcttgattaccaacgtttggttaggatatttccacagctgtccctcttcaagttaaaggtcattagctgtggtgtcctcttctgtggaattctggaacgctaaggttcaacttgaaagtacggggcacctttatattggcttgaaattgtgaaagcagtgaatttaaataagtggagaaagtgatttttcccccaattttctagatgcctgtactttatgatttgatgaagattggatctgttataatacatactctaatactatgatgaataatcacccaggatctcctttggagctttgatagcatagcaaggtcatggcagaggttgcagatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgctatagctccaactgatagtcttcccttggttgatggtactgcagttcatatatttatttctcaatccaatcatttccatgaaattccttctgcttgattagcaatctctaggcagttgagttacatttataagttggttaattggtcctaaatcctaataatttctcattcagccgtgtttccactctttttatcagtgacagtaccacacagtgaatgcctgtgtttcgtttgtcatgtcgatgtgtaaaactatttatgtatattactagtaattgagtatgtgcataatacaagacataacacaatacttagcccacttacatttatatcctttcacagttcattatgaaggcacactcgctgaaaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgggcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggtataaaacttctaaattcttattgctagctcgttctgattctttcaaagattttgctgatatggagtgacatattggaatattgaaggttggtgaagttgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagattccacccaagtctgttgctatttctcctatgcgatgcaaatttgagttcctggtgtctataattgaatcagctttgtctttgcagtgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaaggttcaagcctgggcagtgtttctgatgagaaagccaggctagagtaagatgttttcaaatgtcttcttgttatgattacaatatgaagttcccagttattatgttaaatagcacagctgtacaagatacagaaaactggttaatatatcacgtgcatcataatttagtcaaaactataatgctggagaggtaggagttaggaggaatgcagtaatcactttatggaatcaactgttatgctgattgcctgtgaaattatctcgagataattgcttattttctaccttcttgagctatgaagactaatatctgcggaatacatgaatttccttagggaactaaagaagcagcgagagctagctgctgccaccaaggaggaagagaaaaagaagagggaagaagcgaaggctgctgcagcagctcgtgtccaagccaaacttgacgcgaagaaggggaagggaaaaggaaagggaaaatagatgactagtatttgcttctgactactgtaacctagaaataatccgcaacaaatcatcatctgcaagattgcttgttggctactgttcatcagatgctgcgttgttgctcctgtttgacaccatggctgtactgatagaacaaaattgtagttaacgttttcacaaatcatcacatgcaatcattgaccggttattggttaatgattgcatcttcatatctgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0458100, RefSeq:Os05g0458100