Os05g0458300

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0458300| Description = Similar to Laccase (EC 1.10.3.2)| Version = NM_001062279.1 GI:115464288 GeneID:4339001| Length = 1807 bp| Definitio...")
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Gene Name

Os05g0458300

Description

Similar to Laccase (EC 1.10.3.2)

Version

NM_001062279.1 GI:115464288 GeneID:4339001

Length

1807 bp

Definition

Oryza sativa Japonica Group Os05g0458300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22547165..22548971

Sequence Coding Region

22547165..22548183,22548270..22548401,22548493..22548737,22548826..22548971

Expression

GEO Profiles:Os05g0458300

Genome Context

<gbrowseImage1> name=NC_008398:22547165..22548971 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22547165..22548971 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggtgacgcggctgtgcgtgacgaagagcgtccccacggtgaacggccagttcccggggccgaagctcgtcgtgcgggagggcgacaccctcgtgatcagggtcaccaacaacatcaacaacaacgtcaccttccactggcacgggattcggcaggtgcggagcgggtgggcggacgggccggcgtacatcacgcagtgtccgatccgctccgggggaagctacgtgtacaggttcaccgtgacggggcagcgggggacgctgtggtggcacgcgcacttctcctggctccgcgccacgctctacggcccgctcgtcatcctcccgccccgcggcgtcgcctacccgttccccaagccccatcgcgaggtgcccctcctgctcggtgagtggttcaacgccgacccggaggccgtgatcaagcaggccctgcagacgggaggagggcccaacgtctccgacgcctacacgttcaacggcctccctggcccaacctacaactgctcctcctccaacgacacgttcaagctgagggtgaggcccgggaagacgtacctgctgcggctgatcaacgcggcgctcaacgacgagctcttcttcggggtggccaaccacacgctgatggtggtgcaggcggacgccagctacgtcaagccgttcgccgccacggcgctcgtcatctcgccggggcagaccatggacgtgctcctcactgcggcggccaacaacccgccgtcccgctccttcgccatcgccgtcgcgccgtacaccaacaccgtcggcacgttcgacaacaccaccgccgtcgccgtgctcgagtactacggcgccgcgacgtccgccgccgcgctccggagcctcccgctgccgtccctcccggcgtacaacgacaccggcgcggtggccaacttctcggcgagcttccggagcctcgcgagcgcgcagtacccggcgcgggtgccgcggacggtggacaggcacttcttcttcgccgtcgggctcggcgccgacccgtgccagagcccggtgaacgggacgtgccaggggcccaacaacaccaggttcgcggcgtccatgaacaacgtgtcgttcgtgatgcccaggacgtcgctcctccaggcgcactaccagcggcggtacaacggtgtgctcgcggccaacttcccggcggcgccgcggacgccgttcaactacaccggcacgccgccgaacaacacgttcgtgacccacggcaccagggtggtgccgctcagtttcaacacaaccgtggaggtggtgctgcaggacaccagcatcctcggcgccgagagccacccgctgcacctgcacggctacgacttctacgtcgtcggcaccgggttcggcaactacgacgccagcaatgacaccgccaagtacaacctcgtcgaccccgtgcagcggaacaccatcagcgtgcccaccgccggctgggtcgccatccgcttcgtcgccgacaaccccggttggttacccgctctatacttataccttcatttaaaaagggaatttttatga</cdnaseq>

Protein Sequence

<aaseq>MATVTRLCVTKSVPTVNGQFPGPKLVVREGDTLVIRVTNNINNN VTFHWHGIRQVRSGWADGPAYITQCPIRSGGSYVYRFTVTGQRGTLWWHAHFSWLRAT LYGPLVILPPRGVAYPFPKPHREVPLLLGEWFNADPEAVIKQALQTGGGPNVSDAYTF NGLPGPTYNCSSSNDTFKLRVRPGKTYLLRLINAALNDELFFGVANHTLMVVQADASY VKPFAATALVISPGQTMDVLLTAAANNPPSRSFAIAVAPYTNTVGTFDNTTAVAVLEY YGAATSAAALRSLPLPSLPAYNDTGAVANFSASFRSLASAQYPARVPRTVDRHFFFAV GLGADPCQSPVNGTCQGPNNTRFAASMNNVSFVMPRTSLLQAHYQRRYNGVLAANFPA APRTPFNYTGTPPNNTFVTHGTRVVPLSFNTTVEVVLQDTSILGAESHPLHLHGYDFY VVGTGFGNYDASNDTAKYNLVDPVQRNTISVPTAGWVAIRFVADNPGWLPALYLYLHL KREFL</aaseq>

Gene Sequence

<dnaseqindica>789..1807#571..702#235..479#1..146#atggcgacggtgacgcggctgtgcgtgacgaagagcgtccccacggtgaacggccagttcccggggccgaagctcgtcgtgcgggagggcgacaccctcgtgatcagggtcaccaacaacatcaacaacaacgtcaccttccactggtacgtacgcagctacgcgcgccgccatgtcacaacgatcgtatcgctgattgattaaccgagcgggcgcgtgcgcgtgtgcgtgcaggcacgggattcggcaggtgcggagcgggtgggcggacgggccggcgtacatcacgcagtgtccgatccgctccgggggaagctacgtgtacaggttcaccgtgacggggcagcgggggacgctgtggtggcacgcgcacttctcctggctccgcgccacgctctacggcccgctcgtcatcctcccgccccgcggcgtcgcctacccgttccccaagccccatcgcgaggtgcccctcctgctcggtacgtgcgtttctcgttacgttttttttttggtttttccccgaccgatctgacgttttgatatgggatgggaaacgcgaccgaacggcaggtgagtggttcaacgccgacccggaggccgtgatcaagcaggccctgcagacgggaggagggcccaacgtctccgacgcctacacgttcaacggcctccctggcccaacctacaactgctcctcctccaacggtaacacgccacggcccgtattgatcgacgtcccagtactgtgacactgtacgaacgactcgtggttaatttttctcgttgcgcagacacgttcaagctgagggtgaggcccgggaagacgtacctgctgcggctgatcaacgcggcgctcaacgacgagctcttcttcggggtggccaaccacacgctgatggtggtgcaggcggacgccagctacgtcaagccgttcgccgccacggcgctcgtcatctcgccggggcagaccatggacgtgctcctcactgcggcggccaacaacccgccgtcccgctccttcgccatcgccgtcgcgccgtacaccaacaccgtcggcacgttcgacaacaccaccgccgtcgccgtgctcgagtactacggcgccgcgacgtccgccgccgcgctccggagcctcccgctgccgtccctcccggcgtacaacgacaccggcgcggtggccaacttctcggcgagcttccggagcctcgcgagcgcgcagtacccggcgcgggtgccgcggacggtggacaggcacttcttcttcgccgtcgggctcggcgccgacccgtgccagagcccggtgaacgggacgtgccaggggcccaacaacaccaggttcgcggcgtccatgaacaacgtgtcgttcgtgatgcccaggacgtcgctcctccaggcgcactaccagcggcggtacaacggtgtgctcgcggccaacttcccggcggcgccgcggacgccgttcaactacaccggcacgccgccgaacaacacgttcgtgacccacggcaccagggtggtgccgctcagtttcaacacaaccgtggaggtggtgctgcaggacaccagcatcctcggcgccgagagccacccgctgcacctgcacggctacgacttctacgtcgtcggcaccgggttcggcaactacgacgccagcaatgacaccgccaagtacaacctcgtcgaccccgtgcagcggaacaccatcagcgtgcccaccgccggctgggtcgccatccgcttcgtcgccgacaaccccggttggttacccgctctatacttataccttcatttaaaaagggaatttttatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0458300, RefSeq:Os05g0458300