Os08g0517100

From RiceWiki
Revision as of 20:52, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0517100

Description

Similar to ASYMMETRIC LEAVES2 protein (LOB domain protein 36)

Version

NM_001068775.1 GI:115477287 GeneID:4346037

Length

2758 bp

Definition

Oryza sativa Japonica Group Os08g0517100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25736889..25739646

Sequence Coding Region

25739185..25739472

Expression

GEO Profiles:Os08g0517100

Genome Context

<gbrowseImage1> name=NC_008401:25736889..25739646 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25736889..25739646 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtcgaaagattcggccgtatcgtctccaaatcctgcaaagatctttggagatccagcacccaagatatcacgtaccatgcaggatccggaggaggaggacgacgatcagcagcagcagcatccggcggccaggaggtgcgccgcgtgtcggtacctgcggcggagatgcgccgacgactgcgtgctcgcgcccttcttcccggcctcccgcccacaccgctacgcctgcgtgcacagggtcttcggcgccagcaacgtcgcgaggctgctccaggttcactag</cdnaseq>

Protein Sequence

<aaseq>MRSKDSAVSSPNPAKIFGDPAPKISRTMQDPEEEDDDQQQQHPA ARRCAACRYLRRRCADDCVLAPFFPASRPHRYACVHRVFGASNVARLLQVH</aaseq>

Gene Sequence

<dnaseqindica>2297..2584#gttggcatcatatatatcaatctctcatgagtacaatggaaaggaaaaactaatctagtctgtcgggatatcggcgtaaagctcaagcagtgattgatcgctagctgttgtcagcttcctctagaagtaagaagacgagattggaggtactgtgtatttctcattagtatgttggcttttattacgcttgtgttggcttgttcttctcttctcttgggagtcttcttctcttgggagtcttgtgtttataccctcggttaccctattgtccaagtagaactaggaaaacaaatatgaatataatctgggtagttatggtcgggcctaaatagaattttgtctcttttcttatcaaggactcattctttagttacttaggatttttgccatatgcacgaggcttatgtccgtatagaacttagtatacggtggatctgttgagctaagtacacatgtatagggtatcccatatttaggacactgacaactcatttgaaacacatgattgggaaaaaaattgaagtagaaaaaaatacaggattttggtaggaacgcaagtgcaaaataaaagattgcaaaacataggaatagtcgtttgataaggtcgttggaaaaaacacatgaatcaaatgagagatactcataagaaattttttaagaggttggagttcttgctaacttttcttcaaaatctctatagaattatccatttcataaaaatttcaaagaaaatgataggattgaatcttttgtttcaaatggtgtttgaggattgttttgtaagatagaaaagagtaaaaaaaaaggcacaccaaatcatggggtgttctagaccctttaagcacctcctatcaaatgtggtaacaaaaagaaaaaggaatgaagaccattctatgaggtcataagaccattttactacacattgtagataccctaaagccatgcctataaggccataacacaaaagaaaaaggcactaatgcaaaaaaggtaatcgttgatggccaaatcatatttccattggcatatggtccgactagcgaccgaaggtcagtaaaaatttccctcaaaaaaagtaaaatagaatatttttataagcggggcatcagccgctttagaaaatatattttcattgatgggtatctaaagggcaccgtctatgaaaatcaatcttcacaagcggaacacttaagacacccgccatagaaatattttcaatgcgcaaaaagaaaagtctgacagatcacatacctcgtattccactcaacaaattcattcataaacctctcataatctattcacaaataatgaattcatcacataaagagatgagacagatatgggcacaaaaaaaaatccatcatcaaatgccaacagaaggggaagagagggaggacgggagcggagctggatgtggagtcctcaagcaccttctcaacacccccacccccaccttgccatctcccgagccctaccgcccgtccatagttgtaccagagcttcgtgcaagatttgcccagccgccggatccacgcccgtcactatcgtagttgctgttatcgtcgtcgagagtgcctcggcggaggtagggaggctggagggagttgggagggggagggagggatcagaggcaaggaagtggagaaggagaggtaagcgagaggacaggatgggggagaagatggactctggctcgtgtgcttgggacttgggagtcccgcaatttaatatcgcgaattttttagacagtgctctttaccagctaagagtaaaaaaattgagtttcactagctatcacttatgaagtccgtttagaaaaagaaccatatttttatatacgaacctcttagatgaccgccaacgaaaatcggttcattactagaatccctccaatgcattcttacaaatgtatgttcgccaaacccattagtaaaaataaaaaagaatggtgtcacgaaaaatggttttctttagtcagggggcaccagcgccatagctgcaggtaagggcaacaagagaccgggcgcgcggcgccatggccgcgggccgggggagcagcggagcgatggcgtggggaagacgacctcctatagccgttagcttagacagcagaacaacgcgtacgtatagccgttacacactttccaaccaggagtacgtattcatccatggctgctgcctatacttgcctagtatacgatacacaagcatacatacacactcgatctacgtatagccgttggccagagttgccatgcatgaaatcctttgcatgcagctatggtggacatggtatatgaggtcgaaagattcggccgtatcgtctccaaatcctgcaaagatctttggagatccagcacccaagatatcacgtaccatgcaggatccggaggaggaggacgacgatcagcagcagcagcatccggcggccaggaggtgcgccgcgtgtcggtacctgcggcggagatgcgccgacgactgcgtgctcgcgcccttcttcccggcctcccgcccacaccgctacgcctgcgtgcacagggtcttcggcgccagcaacgtcgcgaggctgctccaggttcactagccaccactgtgctattgccatctgctacttgctcacttaattaattacctgatgaaaattagtgctactacttgtagtaaattttccagagtgtaagtgcattacattagttacgcttacgcattttgtagtgaagggccagcgtgcatttctctactaaagaaacgctttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0517100, RefSeq:Os08g0517100