Os05g0458600

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0458600| Description = Similar to Laccase (EC 1.10.3.2)| Version = NM_001062282.1 GI:115464294 GeneID:4339004| Length = 2552 bp| Definitio...")
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Gene Name

Os05g0458600

Description

Similar to Laccase (EC 1.10.3.2)

Version

NM_001062282.1 GI:115464294 GeneID:4339004

Length

2552 bp

Definition

Oryza sativa Japonica Group Os05g0458600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22579347..22581898

Sequence Coding Region

22579413..22579517,22579613..22579764,22579853..22580226,22580305..22581264,22581395..22581528

Expression

GEO Profiles:Os05g0458600

Genome Context

<gbrowseImage1> name=NC_008398:22579347..22581898 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22579347..22581898 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcagcctcctctgttcttcgttgctgcctcctcgtcgcagcactgatgacgctgtccgcaatgggagctgaagccatcacaaggcagtacctattcgatgtgcaaacgacgagcgtgacgcggctgtgcagcacgaagagcatcgtgacggtgaacgggcagtacccgggccccacgctgttcgcccgcgagggcgaccacgtcgaggtcacggtcgtcaaccactccccctacaacatgagcatccactggcacgggatccggcagctgctgagcgggtgggcggacgggccgtcgtacatcacgcagtgcccgatccagcccgggggaagctacgtgtacaggttcaccatcaccgggcagcgtggcacgctgtggtggcacgcgcacatctcctggctgcgcgccaccgtgcatggccccatggtcatcttgccccctgccggcgtcgggtacccgttcccggcgccgcatgaggaggtgcccatcatgttcggcgagtggtggaacaacgacacggaggcggtgatcagccaggcgctccagaccggcggcgggcccaacatctccgacgcctacaccctcaacggcctccctggccccctctacaactgctcagcccaagacacgtttaagctgaaggtgaagcccgggaagacgtacatgctgaggctcatcaacgctgcactcaacgacgagctcttcttctccatcgccaaccacacgctcaccgtggtcgacgtcgacgcgctctacgtcaagcccttcaccgtcgacacgctcatcatcgcgccgggccagaccagcaacgtgcttctcaccgccaagccgacgtacccgggcgccagctactacatgctggctcgcccgtacaccaccacgcagggcaccttcgacaacaccaccgtcgccggcgtcctcgagtacgacgacccctgccccaccaccgccgccggcaagatcgtccccatcttctcccctacgctgccgcagatcaacgacaccaacgccgtctccaacttcaccgccaagctccgcagcctggccagcgccgggtacccggcggcggtgccgcagcaggtggatcaccgcttcttcttcaccgtggggctcggcacccacccctgcgccgtcaacgggacgtgccagggacccaacggctcccggttcgccgcctccatcaacaacgtctccttcgtgctcccggcgacggcgctgctccagtcgcacttcgccggcaagtccaagggcgtgtacgcctccaacttcccgtactacccgctgaacccgttcaactacaccggcacgccgccgaacaacaccaacgtgatgaacgggaccaaggtgctcgtgctgccgtacggcgccaacgtcgagctggtgatgcaggacaccagcattcttggcgccgagagccacccgctgcacctgcacggcttcaacttcttcgtcgtcggccagggcttcggcaactttgaccccatcaacgacccggccaagttcaacctctacgaccccgtcgagcgcaacaccgtcggcgtgcccgccggcggctgggtcgccatccgcttccacgcagacaacccaggtgtgtggttcatgcattgtcacttggaggtgcacatgagctggggactgaaaatggcgtggctggtgctggatggcagccgtcctgaccagaagctcccgcctccaccgttggatctcccaaaatgctag</cdnaseq>

Protein Sequence

<aaseq>MAAASSVLRCCLLVAALMTLSAMGAEAITRQYLFDVQTTSVTRL CSTKSIVTVNGQYPGPTLFAREGDHVEVTVVNHSPYNMSIHWHGIRQLLSGWADGPSY ITQCPIQPGGSYVYRFTITGQRGTLWWHAHISWLRATVHGPMVILPPAGVGYPFPAPH EEVPIMFGEWWNNDTEAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQDTFKLKVK PGKTYMLRLINAALNDELFFSIANHTLTVVDVDALYVKPFTVDTLIIAPGQTSNVLLT AKPTYPGASYYMLARPYTTTQGTFDNTTVAGVLEYDDPCPTTAAGKIVPIFSPTLPQI NDTNAVSNFTAKLRSLASAGYPAAVPQQVDHRFFFTVGLGTHPCAVNGTCQGPNGSRF AASINNVSFVLPATALLQSHFAGKSKGVYASNFPYYPLNPFNYTGTPPNNTNVMNGTK VLVLPYGANVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPINDPAKFNLYDP VERNTVGVPAGGWVAIRFHADNPGVWFMHCHLEVHMSWGLKMAWLVLDGSRPDQKLPP PPLDLPKC</aaseq>

Gene Sequence

<dnaseqindica>67..171#267..418#507..880#959..1918#2049..2182#acaagctgagctagctaagagcgagcttcattaacatacgagacagagaggtcagtgaaggtagcaatggcggcagcctcctctgttcttcgttgctgcctcctcgtcgcagcactgatgacgctgtccgcaatgggagctgaagccatcacaaggcagtacctattcgatgtaagtgcatgcatatccacggtgtggtgtatcacatcgatacacaagtttcgccaaaaaaaaccaacgcgaatttgccgtgacatgcatggcaggtgcaaacgacgagcgtgacgcggctgtgcagcacgaagagcatcgtgacggtgaacgggcagtacccgggccccacgctgttcgcccgcgagggcgaccacgtcgaggtcacggtcgtcaaccactccccctacaacatgagcatccactggtacgtacgcctcgcgatttccaccgtgttttgacgccaaaaaacccagtgttttcaccgtgtgtgtctcacgtacgtgtgcgtgcaggcacgggatccggcagctgctgagcgggtgggcggacgggccgtcgtacatcacgcagtgcccgatccagcccgggggaagctacgtgtacaggttcaccatcaccgggcagcgtggcacgctgtggtggcacgcgcacatctcctggctgcgcgccaccgtgcatggccccatggtcatcttgccccctgccggcgtcgggtacccgttcccggcgccgcatgaggaggtgcccatcatgttcggcgagtggtggaacaacgacacggaggcggtgatcagccaggcgctccagaccggcggcgggcccaacatctccgacgcctacaccctcaacggcctccctggccccctctacaactgctcagcccaaggtgattaattagtgactgattttgtttaatttagtcgtgtcacaatgtgtgacaatgtgtggtggtttggctgtgcagacacgtttaagctgaaggtgaagcccgggaagacgtacatgctgaggctcatcaacgctgcactcaacgacgagctcttcttctccatcgccaaccacacgctcaccgtggtcgacgtcgacgcgctctacgtcaagcccttcaccgtcgacacgctcatcatcgcgccgggccagaccagcaacgtgcttctcaccgccaagccgacgtacccgggcgccagctactacatgctggctcgcccgtacaccaccacgcagggcaccttcgacaacaccaccgtcgccggcgtcctcgagtacgacgacccctgccccaccaccgccgccggcaagatcgtccccatcttctcccctacgctgccgcagatcaacgacaccaacgccgtctccaacttcaccgccaagctccgcagcctggccagcgccgggtacccggcggcggtgccgcagcaggtggatcaccgcttcttcttcaccgtggggctcggcacccacccctgcgccgtcaacgggacgtgccagggacccaacggctcccggttcgccgcctccatcaacaacgtctccttcgtgctcccggcgacggcgctgctccagtcgcacttcgccggcaagtccaagggcgtgtacgcctccaacttcccgtactacccgctgaacccgttcaactacaccggcacgccgccgaacaacaccaacgtgatgaacgggaccaaggtgctcgtgctgccgtacggcgccaacgtcgagctggtgatgcaggacaccagcattcttggcgccgagagccacccgctgcacctgcacggcttcaacttcttcgtcgtcggccagggcttcggcaactttgaccccatcaacgacccggccaagttcaacctctacgaccccgtcgagcgcaacaccgtcggcgtgcccgccggcggctgggtcgccatccgcttccacgcagacaacccaggcatgtactctgaaccacatcgattcccctgcgattccacatttgcaccaacttaatttagctttagttaatcagtttgcaattataactcatcaaagatacttatgccgatacgattgcacgatctcaggtgtgtggttcatgcattgtcacttggaggtgcacatgagctggggactgaaaatggcgtggctggtgctggatggcagccgtcctgaccagaagctcccgcctccaccgttggatctcccaaaatgctaggaataaaactcaagatcatatcaatagtcaagattggttgcatttgcatcgcttcacacagaccccacttactgttgtccgatcagatatatattttgctgcttcggtttctcatcgtcgatcgacatgcgtgcttcatttgttgctttttttgataaactgattttctcatgcaattgacagtgtgtttgtcagctagctccggtatttgcatgaagtttcaatttctttcgtattttgaggaaatttgatttctttgattggcagggcttgactcttaggactgcttactgtaactcaaagcgatcgcttgctttgcatcttgtaatgtatcccagtgtattttggtgcaataaaatctagttctggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0458600, RefSeq:Os05g0458600