Os09g0548300

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0548300| Description = Conserved hypothetical protein| Version = NM_001070389.2 GI:297609908 GeneID:4347774| Length = 6248 bp| Definition ...")
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Gene Name

Os09g0548300

Description

Conserved hypothetical protein

Version

NM_001070389.2 GI:297609908 GeneID:4347774

Length

6248 bp

Definition

Oryza sativa Japonica Group Os09g0548300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22512899..22519146

Sequence Coding Region

22515083..22515191,22515389..22515576

Expression

GEO Profiles:Os09g0548300

Genome Context

<gbrowseImage1> name=NC_008402:22512899..22519146 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22512899..22519146 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctaggtatcttggtatgtttctgctcctttggtctttaagcaaaagagcagttctactgcctccaaaaattgaagaccttgatttcgttgggtacataaaatctggtggcatgctattagggagaactctttcagttcttataacaatgacccttggaactgcaatggctgctaggcaaggcacaatagccatggctgctcatcaaatatgtctacaggtttggctggcggtatcattactttcggatgcattggctgtttctgcccaggtgcaactctcttttgtaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MSRYLGMFLLLWSLSKRAVLLPPKIEDLDFVGYIKSGGMLLGRT LSVLITMTLGTAMAARQGTIAMAAHQICLQVWLAVSLLSDALAVSAQVQLSFVM</aaseq>

Gene Sequence

<dnaseqindica>2185..2293#2491..2678#acttttcctcctcccctccgccccccgtgctcggcgcctccatcatcgtgcaccgcgccgccctcttcgatcgcccagacgcccacggtgccgtgcccgacccgacgcgactccgcgcggcggctgcgcttgcgctgggcgggggcggggggctatggagctcgctggcggcgggacgggggtcgtgcggcagcgcgccgagccgctgggtgctggcctcctactacgcggcggcgggcggagtgtggggggaggagggatcggctgcgcccgtcgcgccaccctgcgggggctcgcgctgtctcccctcgcgagacgggcggtctcggccgcgggtgggcacttcctccccaggcgcgccgttcgcgcggcggccgccgccggcgatgggggattctacggcgaggaggatgccgccagcgaccagccgtttccggcgcgcgcgtctccctccgatgacgcgaacgattctaccgcggtgcggtaagtcgtaaactctgtgcttgttgtgataaaaatgtttttcgagtattcgatgatttcacttttgcctatggagactgtttggggtgatgcgtgttcagtgtgttcgttgcgctctcagcagtttaggtggggatcatcctggagaaatcaagaaggagctattgaatctggctttaccggccatagttggacaagcaatcgatcctgtggcgcagctgttagagactgcatatattggtcgtttaggtaaattttctcatcttaaatatgagtgacagcagtgtagtgtctgagaaaacgaattcagttctgtgattccttacaaattgttatggtgttatttttctgaaactttgataggtcctgtagagcttgcctcagctgccgtgggtgtgtcagtcttcaatattatatcaaaactgtttaacatcccactcttaagcatcacaacctcatttgtggctgaagatgttgcaagacatgattccgatcagtttacttcaggtacttgatgcttacttactcttatttgctgaagaaatacattgatttaagaattgggagctaaatttctctgatgatgcacagaagggaacatgtctagtgagagtggaggaaggaagagactcccctccatttcttcagctatacttttggctgctgcaattggtgtcattgaggcctcagctttgattctggggtctgaaatactcctcagcattatgggtgtgtcacatgtatgttcaagaatctcataccaatgcattgatgctatcctatatggatgctaaactttagcatatccttcacactttcggtagagactctattttactaaacccttgatgcagtactctccatttatttcttcggcaggcgtcaaccatgcatagtcctgcaaagttgtttctttctttaagggcacttggtgctcctgccgtagtggtttcattggctattcaaggtatctttcgtggattgaaagacacaaagacacctctactttacagtggtaagacttatcacctgctaaattcaatgatttcctatcacttctagactgtcgattagaatttcaaaagtaaatatactggatggagatattatcccattgtcagtacatcataaaagtttatgatcattaattttctctcttagtgacatttgttctgagtcttctgacaactgaacaaaacatatatagtcacttacggatcaatgctgaatcttcaggcttgggcaacatctcagctgtgcttctacttccctttctcgtgtattcgctgaaccttggattaaatggagcagctctcgcaactattgcttcacagtatgtattgcatttaaatatattcaaacaatttcatccagacgtgccacaatttcaggaacacacaaactgttttatagtttaaaattgatacaattgtcaaattggttaaaataaacagatgagacaagctaaaatatatgtctgttactgtttctaataggttttttcttttctggggtcccaattgtttatcgcttaaagtaagagggaatagactgtttgagttttccatcaatgtgctaactaatcctgttttagtttgtttgcttaagaaatgtgcaccccttccatcttatttatttttttctagaatttttcctacatatcgttgatgtattatttgtttgctgccttttgttatcgaaatgtctaggtatcttggtatgtttctgctcctttggtctttaagcaaaagagcagttctactgcctccaaaaattgaagaccttgatttcgttgggtacataaaatctggtgagtggtatgtccatatgtggttattattttactgttaagtaacttttgatgcttccaggcttttgatgcacatgttgtattttatgaatactaacttgcgctagcttttactttgcaactctaatatttatgtacaccttagtgacataactcttgcctttgtacaagttctgaatacttttcaaactttctaggtggcatgctattagggagaactctttcagttcttataacaatgacccttggaactgcaatggctgctaggcaaggcacaatagccatggctgctcatcaaatatgtctacaggtttggctggcggtatcattactttcggatgcattggctgtttctgcccaggtgcaactctcttttgtaatgtaattttgtatttctttgaaaagctttacattcactatgttttttttttttggcaaacatcggtgacttatcttgcccaatgaccttatggggtttgaagttttcaactaaaatatgcaaaactgtggggtgcacttaagtcagtacagaattaagccttaacaaacatgctctctctagaattccccttttgtgagaggcttgggatggttgaatttcctcaatcattcaaccatcccatggtatatgacatttaagcatgatcccaatttctcttgaacagggccttagtgcattcaatttattttagacctacttgattgcaggcattgattgcaagttcttttgccaagcttgactatgaaaaggtcaaggaggtcacatactatgtcttgaaggtaataaataacaacctttattaaattacgcaggtgttatcttctattgttggatattattcattgagcatgtatcgaagcaacttacaactgaactctattttccagataggactgcttgttggtgcagctttagcccttcttctgtttgcctcttttggtagaattgcagaactgttctccaaagatcctatggttctacaaattgttgggagtggtgttctggtatgtgccccttttttttgtcatactacaataagatcttcagcactgtcaacgtcatctttacccgttctgtttttgtttttgaagtttgttagtgccagccaaccaattaatgccctagcttttatcttcgatggacttcacttcggtgtctcagacttctcatattctgcttcttcaatggtatatacacttacataataaatctgtaatattttgatcttgcattagctgcaactatttagtttgccactgtgtcctttcctttctgctgtgattaattactgtcttttgtctacagattactgttggggcaatatcttctttatttttgctatatgctcccaaagtttttggcctccctggggtttgggctgggctggctcttttcatgggtttgcgcatgactgcaggatttttgaggcaagtttttctttctgacttcctctcgtgatttgctgaactgtaggagacaatttgaggttatctttgatatgtattgttatcttttctgtactataatggatggagtaaatagcagagtttaacttcccctgaaaatgcagctgttacaacatttgcatataggttttgttgagctctatttcagtcatttcaaatacagaattactgtgctggtttgtaaatatattgtttgcatatgttgattgtcttcagaatcgttcatatgcttgcaagcatttaatggatgcaaacctttcattgttgtggtgcaaactttggctcctgctgatcataaccaggctgtttgatcatgttgtgacatttacctatctactttacagattgggttcgagagcaggtccttggtggtttttgcaccagaaagagccaacatacaagttagtgaaaatgtattcttggttgtgatgttttattgattcgtttaataataagtaactaatcattaccgctacttctataccaagaattgaactagacgtgagatgctgttaatttgaagttttgaaccaatctacatatggctcaatttaagtctaaattgagtctcatgctagtgccatcttcccatacctgacatatacagtgatatcatctgttgttaaacaataagatatatctttctcactagtaaaacaaagaaggtacatctaattaaaaaaaagatatccttttccaacctatcatggattacgcttagcatattttctagtgcaccatgacagaagtacatttacaaagagattactaattagttttaattttaggagacaaagacaaccctttaatctgaataaggttctttggctgtaacattaccacattggtttggcatctagttgttatcttttggtagaaaatatagtgatgattgcatctttagggtatgcacatagctggtagtatttttgctaatacattgttatatgcagattacactcaagtacatgttgatgttgggctgcaggggataaataggaagatagagaatggaagtgatcaaaggtgcattatactcaacagactagttcaatatattttgttcttagcattgtgttgacttttgcaaatgttttggactttaggtagatttacatgatattaactgaagtacaagcataaattcacataaattgagaactaactctctctctctctctctctctctctctgaaagtagaagtgtgtaaagaacatggtagattctattttatattgttatgataacaacaaacttgaaagatataaaacctttctaatcaatcagtaggatcctggaggcagtacttgtgttcttttcctatgaatatacttgtagggtagtcgtcagtaaagactcgcataatcagcaggcccatatggctggaaccattcagccagtactcctttcttccttttagggttgcatccaatgtcttggcataagatatcgttaaaccaaatgttaacggtgcttatacaggacctgcgaaagtactttccgttgtaaagatccttatatttagcccactctgctacactctcttccatacatcttatgcttggtaatttgaagcgaccacccaggaaatgcgtaacccaattggccatcctttctgaggcatatatgttggtaaggctctcagagtatccaacaattgctaactgaggaatccgaggatggatgcattctctgcaagtttcaaatattttggtaaatgggaaatgaacgtacaggctttaactagtaaacattaaaacttaaacatgatgtatcaagtttattaaattctcatcatcccaaattatgctaactactggcttattgttatcaaaaccattggaatttcgtaatgatacctattagctgctctggagcgtaaaaattggttaatagcttcaacagctgatggacattttcatgcataatagcagtgcactaattttgcggacataatgttatcccttgttcctgtctattcactgtattgttctcaaagtatgcacactaaccaaagaaatgttgaacttctacctgtatagagggaccgcagtagctgatgaccctgccactttctctttgcaccagtttgctgtgaagatgtctctaagtttctgatctcccctaaatcctgttgctagaattacaatgtcactctttatgtgttcatttccatcttccaggatgattccatcattaaagaagctgaacctcttggatttcttgagaataatgctgccttcatcaaccttatcataaaacccctctggtagcattgcaatcaagcaagacgacatggcaaaggagaagctgtagtcaggaaccatcccatgcttttgtaaaggaatgctttgcttgaagtaagtttcaattacttttgagattgcccatctctgaaaaagcagatggaaagaaatattttcagttttgtgggttctcaagcttattagtctgaatgaaagttgaactggtttctaaactccaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0548300, RefSeq:Os09g0548300