Os05g0459700

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0459700| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001062287.1 GI:115464304 GeneID:4339010| Length = 1756 ...")
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Gene Name

Os05g0459700

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001062287.1 GI:115464304 GeneID:4339010

Length

1756 bp

Definition

Oryza sativa Japonica Group Os05g0459700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22633074..22634829

Sequence Coding Region

22633074..22634393,22634731..22634829

Expression

GEO Profiles:Os05g0459700

Genome Context

<gbrowseImage1> name=NC_008398:22633074..22634829 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22633074..22634829 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggacgacagatccctcctcccaccgccgccgcctcctcccgcgtcgtcgtcgcggcggtggccgcgctgctgctcgccgcggcgctccagccgctgccggtcgcgtccggggtggacgtggcggcggtgctcgcggcgttcccggacctcgccggcttcgcgcggctgctcgcgtccagcccggtggccagggagctcgcggggcggtcgtcgctgacgctgctggccgtgccgaacgggaacctcccccagtcgccgtcggcgtacgccgcggcgtccggggccgacctcgccgacgtgctccgctaccacgtcctgctcgagtacctcgcccccgccgacctccgccgcctgccggcatccgggaagctggtcaccacgctgttccagaccaccggccgcgcccccgccgacctcggcgccgtcaacgtcaccgccgcggggccgtccctcgccgtcgtccgctcgccggcgccgttcccggggtcgaacgccaccgtgctcggcgccatcaccgccgtgccgtacaacctgagcgtgctcgccgtggacggcctcatcgtgccgtccgggttcgacctcgcggcgtcggagtcgcggccccccgccgccgtcaacatcaccaaggtcctcgccgacgcgcgggccttcaacgtggcggcgtccatgctggaggcctccggcgtggcggacgagttcgaggccgacgagcgcggcgccggcatcacggtgttcgcccccaccgacgacgccttcgccggcctccctgccggcgaccgcctccagtccctccccgccgagcgaaaggccgtcgtactccgcttccacgtcctccactcctactacccgctcggctccctcgagtccatcgtcaaccccgtccagcccacgctcgccaccgagttcacccaggccgggcgcttcaccctcaacatcacacgcgccaacggctccgtcgccatcgacaccggcgtcgtgcaggcgaccatcacacgcacggtgttcgaccagaaccccgtcgccgtgttcgccgtctccaaggtgctcctcccgaaggaaatgttcagccgcagcgactccgccatcgtcgccgtcgcgtcggcgcccccgccggccgcgctgccggcggaatcacccgagagcgcgccgacaaagctatcgtcgccgccggcgctgcgcgacaccgccggcaacgcgaaccacacggcggcggctgcggcggtggcggcagcggcggcgacgacgaaaccgacaattggccggtggtgtatagcattgttgtatctactactactaccactactgctacctctgatttgcatggggttgggggaagaaggtggtgaagtgaccggggaggtgaggggagaggagaggaggagggtggggggtggcagtgagctggctgggtag</cdnaseq>

Protein Sequence

<aaseq>MRGRQIPPPTAAASSRVVVAAVAALLLAAALQPLPVASGVDVAA VLAAFPDLAGFARLLASSPVARELAGRSSLTLLAVPNGNLPQSPSAYAAASGADLADV LRYHVLLEYLAPADLRRLPASGKLVTTLFQTTGRAPADLGAVNVTAAGPSLAVVRSPA PFPGSNATVLGAITAVPYNLSVLAVDGLIVPSGFDLAASESRPPAAVNITKVLADARA FNVAASMLEASGVADEFEADERGAGITVFAPTDDAFAGLPAGDRLQSLPAERKAVVLR FHVLHSYYPLGSLESIVNPVQPTLATEFTQAGRFTLNITRANGSVAIDTGVVQATITR TVFDQNPVAVFAVSKVLLPKEMFSRSDSAIVAVASAPPPAALPAESPESAPTKLSSPP ALRDTAGNANHTAAAAAVAAAAATTKPTIGRWCIALLYLLLLPLLLPLICMGLGEEGG EVTGEVRGEERRRVGGGSELAG</aaseq>

Gene Sequence

<dnaseqindica>1..1320#1658..1756#atgcggggacgacagatccctcctcccaccgccgccgcctcctcccgcgtcgtcgtcgcggcggtggccgcgctgctgctcgccgcggcgctccagccgctgccggtcgcgtccggggtggacgtggcggcggtgctcgcggcgttcccggacctcgccggcttcgcgcggctgctcgcgtccagcccggtggccagggagctcgcggggcggtcgtcgctgacgctgctggccgtgccgaacgggaacctcccccagtcgccgtcggcgtacgccgcggcgtccggggccgacctcgccgacgtgctccgctaccacgtcctgctcgagtacctcgcccccgccgacctccgccgcctgccggcatccgggaagctggtcaccacgctgttccagaccaccggccgcgcccccgccgacctcggcgccgtcaacgtcaccgccgcggggccgtccctcgccgtcgtccgctcgccggcgccgttcccggggtcgaacgccaccgtgctcggcgccatcaccgccgtgccgtacaacctgagcgtgctcgccgtggacggcctcatcgtgccgtccgggttcgacctcgcggcgtcggagtcgcggccccccgccgccgtcaacatcaccaaggtcctcgccgacgcgcgggccttcaacgtggcggcgtccatgctggaggcctccggcgtggcggacgagttcgaggccgacgagcgcggcgccggcatcacggtgttcgcccccaccgacgacgccttcgccggcctccctgccggcgaccgcctccagtccctccccgccgagcgaaaggccgtcgtactccgcttccacgtcctccactcctactacccgctcggctccctcgagtccatcgtcaaccccgtccagcccacgctcgccaccgagttcacccaggccgggcgcttcaccctcaacatcacacgcgccaacggctccgtcgccatcgacaccggcgtcgtgcaggcgaccatcacacgcacggtgttcgaccagaaccccgtcgccgtgttcgccgtctccaaggtgctcctcccgaaggaaatgttcagccgcagcgactccgccatcgtcgccgtcgcgtcggcgcccccgccggccgcgctgccggcggaatcacccgagagcgcgccgacaaagctatcgtcgccgccggcgctgcgcgacaccgccggcaacgcgaaccacacggcggcggctgcggcggtggcggcagcggcggcgacgacgaaaccgacaattggccggtggtgtatagcattgttgtatctactactactaccactactgctacctctggtatgagatccggttcgtttgcttgtccattaccatccttgttgagctcgaatttttgcttttcttttttcttttctttttttttgttataacctgtacactggggaaggggagaagtttgagaagaggtgaattcagattgagctgcaaagcagcattattattattattttcgctttctttttttctttttgttcttaccagctgcttcatgttggcaaaagggaaataatagtactagtaatgtaccatcctgtaaagatccaatcgattccatgttcatgttgtgcctgatggctgatgcttcatcaaattcatccccatctttgcttggaagatttgcatggggttgggggaagaaggtggtgaagtgaccggggaggtgaggggagaggagaggaggagggtggggggtggcagtgagctggctgggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0459700, RefSeq:Os05g0459700