Os05g0460000

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0460000| Description = Similar to 70 kDa heat shock cognate protein 1| Version = NM_001062289.2 GI:297604614 GeneID:4339012| Length = 3098 ...")
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Gene Name

Os05g0460000

Description

Similar to 70 kDa heat shock cognate protein 1

Version

NM_001062289.2 GI:297604614 GeneID:4339012

Length

3098 bp

Definition

Oryza sativa Japonica Group Os05g0460000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22645294..22648391

Sequence Coding Region

22645495..22647224,22648025..22648235

Expression

GEO Profiles:Os05g0460000

Genome Context

<gbrowseImage1> name=NC_008398:22645294..22648391 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22645294..22648391 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagggggaagggccggcgatcgggatcgacctggggacgacctactcgtgcgtgggcgtgtggcagcacgaccgcgtggagatcatcgccaacgaccaggggaaccggaccacgccgtcgtacgtcgccttcaccgacaccgagcggctcatcggcgacgccgccaagaaccaggtcgccatgaacccaaccaacaccgtcttcgatgcgaagcggttgattggtaggaggttctccgacccgtccgtgcagagtgacatgaagctatggccgttcaaggtggtgcctggccccggcgacaagccgatgatcgtcgtccagtacaagggcgaggagaagcagttcgccgcggaggagatctcgtccatggtgctgatcaagatgagggagatcgcggaggcctacctcggctcgtccatcaagaacgccgtggtcaccgtcccggcctacttcaacgactcgcagaggcaggccaccaaggacgccggcgtcatcgccgggctcaacgtgatgcgcatcatcaacgagcccaccgccgccgccatcgcgtacggcctcgacaagaaggcgacgagcagcggcgagaagaacgtgctcatctttgacctcggcggcggcacgttcgacgtgtcgctgctcaccatcgaggagggcatcttcgaggtcaaggccaccgccggcgacacccacctcggcggcgaggacttcgacaaccgcatggtgaaccacttcgtgcaggagttcaagcgcaagaacaagaaggacatcagcggcaacccgcgcgcgctgcggcggctcaggacggcgtgcgagcgcgccaagcgcacgctgtcgtcgacggcgcagaccaccattgagatcgactcgctgtacgagggcatcgacttctacacgacgatcaccagggcgcggttcgaggagctcaacatggacctgttccgcaagtgcatggagcccgtggagaagtgcctccgcgacgccaagatggacaagagcagcgtgcacgacgtcgtgctcgtcggcggctccacccgcatccccaaggtgcagcaactgctccaggacttcttcaacggcaaggagctctgcaagagcatcaaccccgacgaggccgtggcgtacggcgccgccgtccaggccgccatcctgagcggcgagggcaacgagaaggtgcaggacctgctcctgctcgacgtcaccccgctgtccctcggcctcgagaccgccggcggcgtcatgaccgtgctcatcccgaggaacaccaccatcccgaccaagaaggagcaggtcttctccacctactccgacaaccagcccggcgtcctgatccaggtgtacgagggcgagcgcgccaggaccaaggacaacaacctcctcggcaagttcgagctctccggcatcccaccggcgccgcgcggcgtgccccagatcaacgtctgcttcgacatcgacgccaacggcatcctgaacgtgtccgcggaggacaagacgacggggcagaagaacaagatcaccatcaccaacgacaaggggcggctgagcaaggaggagatcgagaagatggtgcaggaggcggagaagtacaaggccgaggacgaggagcacaagaagaaggtggacgccaagaacgccctcgagaactacgcctacaacatgcgcaacaccatcaaggacgagaagatcgcctccaagctcgccgccgacgacaagaagaggatcgaggacgccatcgatggcgccatcagctggctcgacaccaaccagctcgccgaggccgacgagttcgaggacaagatgaaggagctggagggcatctgcaacccgatcatcgccaagatgtaccagggccccggcgccgacatggccggaggcatggacgaggacgcgccggcgggcggcagcggcgcaggccccaagatcgaggaggtcgactaa</cdnaseq>

Protein Sequence

<aaseq>MSKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV AFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGD KPMIVVQYKGEEKQFAAEEISSMVLIKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQA TKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIE EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAK RTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKS SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEK VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEG ERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITI TNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASK LAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQGPGADMA GGMDEDAPAGGSGAGPKIEEVD</aaseq>

Gene Sequence

<dnaseqindica>1168..2897#157..367#cccctcccctctccccccgcttcgtctcgttcgagaaatcagaaagagagagaaattcccacgcagcagcaagcaatccaatccgagagcgcgcgtttgcgattattcgctttcgattccgcgaggtttttggagagggaggagaaggaggaggagatgtcgaagggggaagggccggcgatcgggatcgacctggggacgacctactcgtgcgtgggcgtgtggcagcacgaccgcgtggagatcatcgccaacgaccaggggaaccggaccacgccgtcgtacgtcgccttcaccgacaccgagcggctcatcggcgacgccgccaagaaccaggtcgccatgaacccaaccaacaccgtcttcggtacgttaccctgcatcctcccgccctccctctccctgcttccacttttgcttgcgccggttgtgactgtgaacgcgatctgcaccgtggttttttagttttggatgtgtaaaagagtgtactagatcgatgagaatatgatgccctgttctagtgtcctctggtaattatgtttctgtcctctgtaatctgtatgggttggagtagctatggaatcagttctgcaactccgtggtttcttcttctgaatagatgtgttaggagaggttctgcgatttgttcacgcgtagctaaaagttgagcatatgttacagatcaattttacttgcttactgctcgtgccaattcccaaaggagttaatatgtcaattttgctttggttcattgtgcacaggcatgttgttaggtccactggaatagtatatgaacagtttctcgaccaaatcgaaatcgtgctttttatttagtgaagatttgggtctcactgctgtgtagaattttgatgaatgccactaaaatagatggagattatgtttgcttcttggatttactttagtagattagatttggaattttctgctgaatcaatggaccaatcgaactcattggagattatgtttgcttttatatatttagtgaagattgagtctcactgctgtagtgctgtgtagaattttgataataaatgctagttgaacagttggaccattgtatttgctttgttgatttgaaattttctgctgaatcgatggagcaatcgaactcactggtgttgcgatttttctcaatctcaaacgcagatgcgaagcggttgattggtaggaggttctccgacccgtccgtgcagagtgacatgaagctatggccgttcaaggtggtgcctggccccggcgacaagccgatgatcgtcgtccagtacaagggcgaggagaagcagttcgccgcggaggagatctcgtccatggtgctgatcaagatgagggagatcgcggaggcctacctcggctcgtccatcaagaacgccgtggtcaccgtcccggcctacttcaacgactcgcagaggcaggccaccaaggacgccggcgtcatcgccgggctcaacgtgatgcgcatcatcaacgagcccaccgccgccgccatcgcgtacggcctcgacaagaaggcgacgagcagcggcgagaagaacgtgctcatctttgacctcggcggcggcacgttcgacgtgtcgctgctcaccatcgaggagggcatcttcgaggtcaaggccaccgccggcgacacccacctcggcggcgaggacttcgacaaccgcatggtgaaccacttcgtgcaggagttcaagcgcaagaacaagaaggacatcagcggcaacccgcgcgcgctgcggcggctcaggacggcgtgcgagcgcgccaagcgcacgctgtcgtcgacggcgcagaccaccattgagatcgactcgctgtacgagggcatcgacttctacacgacgatcaccagggcgcggttcgaggagctcaacatggacctgttccgcaagtgcatggagcccgtggagaagtgcctccgcgacgccaagatggacaagagcagcgtgcacgacgtcgtgctcgtcggcggctccacccgcatccccaaggtgcagcaactgctccaggacttcttcaacggcaaggagctctgcaagagcatcaaccccgacgaggccgtggcgtacggcgccgccgtccaggccgccatcctgagcggcgagggcaacgagaaggtgcaggacctgctcctgctcgacgtcaccccgctgtccctcggcctcgagaccgccggcggcgtcatgaccgtgctcatcccgaggaacaccaccatcccgaccaagaaggagcaggtcttctccacctactccgacaaccagcccggcgtcctgatccaggtgtacgagggcgagcgcgccaggaccaaggacaacaacctcctcggcaagttcgagctctccggcatcccaccggcgccgcgcggcgtgccccagatcaacgtctgcttcgacatcgacgccaacggcatcctgaacgtgtccgcggaggacaagacgacggggcagaagaacaagatcaccatcaccaacgacaaggggcggctgagcaaggaggagatcgagaagatggtgcaggaggcggagaagtacaaggccgaggacgaggagcacaagaagaaggtggacgccaagaacgccctcgagaactacgcctacaacatgcgcaacaccatcaaggacgagaagatcgcctccaagctcgccgccgacgacaagaagaggatcgaggacgccatcgatggcgccatcagctggctcgacaccaaccagctcgccgaggccgacgagttcgaggacaagatgaaggagctggagggcatctgcaacccgatcatcgccaagatgtaccagggccccggcgccgacatggccggaggcatggacgaggacgcgccggcgggcggcagcggcgcaggccccaagatcgaggaggtcgactaaactgctccatggttgccgctcacgatgttctttctgccatcgtctcttttggctgtggcttgatctgtcgtatcgtcgttgcttctggtagaaattaagtgagagttgtgggggaggaacgctgtggtttacctgtggtttggaactttcatctgaacagcttttggatatggcgatgcattcttagttaattattgtgag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0460000, RefSeq:Os05g0460000