Os05g0460200

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0460200| Description = Similar to Ubiquitin carrier protein| Version = NM_001062290.1 GI:115464310 GeneID:4339013| Length = 4400 bp| Defin...")
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Gene Name

Os05g0460200

Description

Similar to Ubiquitin carrier protein

Version

NM_001062290.1 GI:115464310 GeneID:4339013

Length

4400 bp

Definition

Oryza sativa Japonica Group Os05g0460200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22661717..22666116

Sequence Coding Region

22661825..22661876,22662000..22662102,22664217..22664314,22664386..22664486,22665008..22665085
,22665534..22665611

Expression

GEO Profiles:Os05g0460200

Genome Context

<gbrowseImage1> name=NC_008398:22661717..22666116 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22661717..22666116 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgactgccgcgagccaggcgagcctcctgctccagaagcagctcaaagatctcgcgaagaaccccgtggatgggttctcggcggggcttgtggacgatagcaacgtgttcgagtggcaggtcaccatcatcggcccgcccgataccctgtatgatggaggctacttcaatgcaataatgaccttcccccagaattatccgaatagtcccccatcagtaaggtttacctctgagatgtggcatccaaatgtttatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatcccaacggttatgagcttgcgagcgaacggtggacacctgtgcatacagttgaaagtatagttctgagcatcatttcgatgctctctagtccaaatgatgagtctccagcaaatattgaagcggctaaggattggagagaaaagagggacgatttcaagaaaaaggttagacgcattgttcgtaaatcacaggaaatgctctga</cdnaseq>

Protein Sequence

<aaseq>MATAASQASLLLQKQLKDLAKNPVDGFSAGLVDDSNVFEWQVTI IGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEMWHPNVYPDGRVCISILHPPGED PNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKRDDFKKKVRR IVRKSQEML</aaseq>

Gene Sequence

<dnaseqindica>109..160#284..386#2501..2598#2670..2770#3292..3369#3818..3895#gcgaactctccacgcctccacaaataaagctcgtcccgaggaagggcggcgacccaccccccccaatcgccaaaaccctaactccgatccgatcgagctctgcttcccatggcgactgccgcgagccaggcgagcctcctgctccagaagcagctcaaaggtacggatcggaacggccccccgtgcaatcttatctcgtctaatctcctatttttttttttggtcccgattcgtcggcgatcggttcttgatcttggcccgcctttttgcgggatcgttgcagatctcgcgaagaaccccgtggatgggttctcggcggggcttgtggacgatagcaacgtgttcgagtggcaggtcaccatcatcggcccgcccgataccctgtagtaagttcaattcccacaccccccctctaatcgctgcgcgattgctggtttgtagatcgattggtttacgcctattcgtcgccgtgttttgattatgtttgttttgcgtttacaccatggcaattccacctggtagatattgatgtacagtgcttatgaattgttgtgaaaactgtctgaattccatattgccgtgttgatctggagggtgtagctcaacgaatttgcattacctatgtatctcggtgttgatatatggaattgcctgttcagttatgcgccttggagacatgcacgaagcctttctgtgtttgtggttctacaattgataataagatatattagttatagggagctgagacttgggagtaaggtagaggccagtatcttgtttcaatattcaacggggataaaaaagggctgaattggattaatagctccttttaagtatgtgggtattgctggatcgatagaaacaattggtttagtggatgtacaagatttgtaggatggggagcttcatattcatctgagttcatatccatcatgttcctgtctggaaagtttgacgcacgtttaaatgccaactatccctaccccttcttttagtggggattatattttgccctggcaaatgtacacgcacaacttgatttaataaaacaggtgaacgtagtataaccagctgttttcatgatactggtttgcttggttttggattgatacacaattattttagcgttcatatgaggtgaccttaatcgattaataactgggtgcgcctatcatatagctagatcatctggcatatcgattatttaccttaatcaattaataactgggtgaccttaaccttaatcaattaatattgctagatcatctggcatatggttaaagtgacaatgatttaaataatacacttggttaatattggagttacatgcattttgtgatatggtttgatggaaattcttaagaatcatttggctgctattttgcattggaaaagggaagagaaacacattttgacctcaaatctgccggcactcaacaagggttcaccggaaacctatattccaaagcagtgtattacgtataccatgttatctaagtatatatttcctgtttttcttatctactagaacgagatcttccttttgacactctggtttttggtaacagattagtattgcttaagtattacagatacggggtatctatggcagtcatgtcatgtgacatgctgcaaacaagtagcaacaaaagatccataatgcaaatgaaaaaaaaaatgataggatgaagcatatgggtctgtttggtccatcaatttgtcttccaatattagattattgtcctttttagctcacccaataaaacggcagtgtgcttttttggcctagtcccttctcttgtaatccattgtgcatacaatagcaccagttctgttcttcctatcaagttcctctgctcctcttgatttctcttcccctctctccaacgttgacaactcaacaccccatctgcttttcaccatcatgccctcgttcctcagttggaatgaggaattgtggcaaactcattgcctccttcctctgttgatgctcttcctgtgatgcggaagagccactggcagcagtcacatccatggaggtcaagcggctgatgaagcatagaaagcgcacagaccatatcatatgcgcactacctcatgccaatgccatatagctcaatttttctatttgttttaatgctaaatgctacattgtgtttccagtacaccgtattgtggtgtatcgccttatcacatacaggaatggcacttagctgttgtatcgggtgattcctagagtatcattgagtcattctcaatctgtgccagtactgttaatagcttctagtgattaagctgtgcctcttgatttgctttctgtacatttatctgtcgattgatttgactattatctgtgtttcttctgtgcttaagtgattgtacatttttaaaacttctttgttcttactttaaaagcttaatttttttgctttaaaccaatatctttatatatttcactggaccttggtaagatttaatgtgtgaacttctgtttctgcagtgatggaggctacttcaatgcaataatgaccttcccccagaattatccgaatagtcccccatcagtaaggtttacctctgagatgtggcatccaaatggtaagcttgctattgatctatgattttgctatatcaattttctaacagggtttataatgttcaattcttagtttatcctgatgggcgcgtatgcatttctatccttcatccacctggcgaagatcccaacggttatgagcttgcgagcgaacggtggacacctgtgcatacagtaggttcttttttacaatgcatacaagtgtttttctctctttgttcgttggcacaggtgttttgtccaacattcttatagactcttcaattcggtataaacatgcatcacagcaaatctgtatcaagtgtctgttccactagctaatagttgcgaagcccaaagtcttctctgatctgaagatgccctggaatgtaaaacattttatgatgctagcatgtttctacattttcttgttctaatcacctaaacttattggatatataatcccaatctttcaaaacagatttttgctgactagaaatctatcaatctcagatagttatgaacatccatcctgtgatttctttaagtagcagtaatatatgaattttatggttaggaatatgattccacgtattgcttgtccaaaataacctaaaattcattttggaggcttggcgcgcacttatcagtgttaatttggaagatttgtggtcaattattttcttgctaaattattttgtgcttgtaacttgcaggttgaaagtatagttctgagcatcatttcgatgctctctagtccaaatgatgagtctccagcaaatattgaagcggctgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattctgctgctccaatgcaatgttgtaaatgtatttatcttatttacagatttcaatttcactaatagatgagtgagatatcttgattgtatgttgcatcctaaaataaaaaccgcaatttgagtctctctgttgaacatggatgggggtttctctctgtgttgatctcatcgcagttagcagagtaattgcccgttgacatccacaaaacatgtgtgccactgaaggtcttgatagtcattcaatttgatttgtgccatgtctagaagtttctagtacttcattccttcactgcaaaaacgtatattctgtttctattactttctgaacgtgtgctttgaaatttgtggtgctggtgcagaaggattggagagaaaagagggacgatttcaagaaaaaggttagacgcattgttcgtaaatcacaggaaatgctctgaaagataaggagcacaagggggagtaagcgagtgctacaacaggtgcactacacttaactgtctgtcgtcaaacgactacctaaagatagcatttttgcttcttcccctgtatatttccccctcagtgtcattcgagtggtgatgttggtcttgtctccgagatgctcggaaatgttgcctattctagaaatttcgattgtattgtgtggcatggagtgtcaacgttgaggaatattttggaatgctgccaattagtcataattgtcgtaatgaacttttcataacagaaaacctagtttcacatatctgttggcttactgcagcagcccggaatgccatctcgttgtgagtatataactctgatttgtttgagtattgtttatggccgcaaaaggatggttttaggcttgtagcatgtctactctgactttcatattcttcctgtacctgtacgttgccaatcatatggaaatcaactggcagcaatctggttatcttttcagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0460200, RefSeq:Os05g0460200