Os08g0539100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0539100 |
|---|---|
| Description |
Zinc finger, DHHC-type domain containing protein |
| Version |
NM_001068909.1 GI:115477556 GeneID:4346178 |
| Length |
3265 bp |
| Definition |
Oryza sativa Japonica Group Os08g0539100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27026838..27030102 |
| Sequence Coding Region |
27027143..27027586,27027682..27027915,27028052..27028357,27028709..27028891,27029633..27029740 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27026838..27030102 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27026838..27030102 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaagggaggatgcaggggaaggcgccactgtcggattccaaccggcggatcatggacgccgacgcgccgccgcggcgggtgtaccaggggtggaaggggagcaatatatttttccttggagggagacttatttttgggcctgatgtgaggtcactcatactcacagtgtgtttaattgtaattccagtgatcctctttgctgctgttatttctggacagcttgaccatgagtaccacaaccaaattggaggttgggttgcatcagtagctatcatctttacagcatatattattgtccttctgcttctcacatctggccgggatcctggaattattcctcgaaatgctcatccaccagaacctgaagatgttggtgaatcctccaacttatcagagtggccaggtggtcaacatggttcgacgggtttacctctcaccaaagatgttcttgttaatggtgttttagtcaaggtcaaatattgccatacatgtatgctatatcgtccaccaaggtgctcccattgctcaatctgcaacaactgtgttgaacgttttgatcaccactgcccttgggtaggccaatgcattggaaagagaaactaccgattcttctttatgtttgtgtcttcaacaactttactatgcgtatatgtgtttgcattctgttgggtcgatctcaggataataatggacacacatagatgcaaattagggagagctatcatgaaatctcctgtctctggcattctcatcttgtacacatttattgctgtgtggtttgttggagggttgacctcattccacctctacttgatttctaccaatcagacaacttatgagaacttccgataccgctacgataggaaaacgaatcctcataaccgtggactggtccagaatttcattgagatcctgtgttcaagaatccccagctccagaaacaacttcagggcaaaagtaaaggaagattctgccaccttcccctcatcactcggtatggggcgggcactaagtccgccgaagatgagtgtggacctcgagatgggaatgaaaaggcaaactgtggccatggaggaactggaagacttacacagccaaatcggcagtgctatggggctggagcgatgcggcactgaacccccacatattgtcggtcgaaagggctgctctgaaattgcaaccgacatagaagcatttgctgaagagtttggcctggaacaaaggttcactgagaggaagaagattgagcaacgtacaagtcataacccatag</cdnaseq> |
| Protein Sequence |
<aaseq>MEGRMQGKAPLSDSNRRIMDADAPPRRVYQGWKGSNIFFLGGRL IFGPDVRSLILTVCLIVIPVILFAAVISGQLDHEYHNQIGGWVASVAIIFTAYIIVLL LLTSGRDPGIIPRNAHPPEPEDVGESSNLSEWPGGQHGSTGLPLTKDVLVNGVLVKVK YCHTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGKRNYRFFFMFVSSTTLLCVY VFAFCWVDLRIIMDTHRCKLGRAIMKSPVSGILILYTFIAVWFVGGLTSFHLYLISTN QTTYENFRYRYDRKTNPHNRGLVQNFIEILCSRIPSSRNNFRAKVKEDSATFPSSLGM GRALSPPKMSVDLEMGMKRQTVAMEELEDLHSQIGSAMGLERCGTEPPHIVGRKGCSE IATDIEAFAEEFGLEQRFTERKKIEQRTSHNP</aaseq> |
| Gene Sequence |
<dnaseqindica>2517..2960#2188..2421#1746..2051#1212..1394#363..470#gcgatcccaaggtgacatcaccaccacgcgccgccgatcctctcgccgcctccagctctcgagctctcgtcccccattgcttccggagaagcggaccctgttctccaggtaggcctcgccgtctcacgccgactcgttcgatgcatctcctctcttgctgggatccgtgagagccgcctgattcttgatcttgcaggtggtggggtgggtgcccatttcgtcaaatctcggaatatttgaggttttctcgtgacctgggttttggctttgggacgctgaagatttggggttttgcgagttcgatgaggctgctttggtgagcttgtggggggttcttggggacagtctttgcaggtgtggagatggaagggaggatgcaggggaaggcgccactgtcggattccaaccggcggatcatggacgccgacgcgccgccgcggcgggtgtaccaggggtggaaggggagcaatgtaaggaacttcttgcttattatactctttattggtttgtgattctgcaaatttatgataaatttggtgaattaagggggagataaatccatgttttctgtgactctgttgagtgtttgactggtatgatggtgttaataatggtatctgagaatttggtcaagtggtcataatggtgtggatactaggtgtcataaagggttaaggtacagaagacatgtgtgtgtcaactgtttaggtgtttgttgatgtgtgctgtcattctgtcaagtaccatgacatacatgagatgtttcgttctcatggagactgtcatactgagagtgatagatggtaggcattgatgcatttatgcatcttctttataaacacatcaacaattggagctctgttgtatatatatgatatttattggctacacaaaatgagtgagaagtagaaatcgaaacttcagaggagttctttttataaacttgaactgatgcatattttcctaacccggacactggcatattcatacgttttcaggttaataaactcatctatttttgttctctttatgtactagcatgggcttattagattcattactaagattataaatgcagttcttattaactacaagtggaaattggagtttaattgataactatattctctttttagctttttatggttatggtcttcttcttaatgcttctataggaaaagaactcatgtgttctttgtttgttcttgcagatatttttccttggagggagacttatttttgggcctgatgtgaggtcactcatactcacagtgtgtttaattgtaattccagtgatcctctttgctgctgttatttctggacagcttgaccatgagtaccacaaccaaattggaggttgggttgcatcagtagctatcatctttacagcatatgtaagtttgtgagacaagtacatacagtcaactacacaaccattatagatcgtttttattccttttcagaaatttaaagtcatctctcataggcctaccacagccatgctgatgcaccatgataataatcacattcttgtcatatgttacaaatctttcttaagaatatcttgtcatgtcatcctctaggagcatcactcctttgcattttttttcaccatgtttaggataacgcaatccatagggcactaggatagaaggtcatattaattgtatatttatgggaagcaggatggcagctgcgtctgtaatttggcaatataaccaatctactgttgctcttatgtgcagattattgtccttctgcttctcacatctggccgggatcctggaattattcctcgaaatgctcatccaccagaacctgaagatgttggtgaatcctccaacttatcagagtggccaggtggtcaacatggttcgacgggtttacctctcaccaaagatgttcttgttaatggtgttttagtcaaggtcaaatattgccatacatgtatgctatatcgtccaccaaggtgctcccattgctcaatctgcaacaactgtgttgaacgttttgatcaccactgcccttgggtaggccaatgcattggaaaggtatatattactttgtgtcaacgagatcactagctgtattattttctcgtaatgtttagggtgtattggtctgctacaaaatactagtaataatcatgcattattctactaattatgccttttgattatcttgcagagaaactaccgattcttctttatgtttgtgtcttcaacaactttactatgcgtatatgtgtttgcattctgttgggtcgatctcaggataataatggacacacatagatgcaaattagggagagctatcatgaaatctcctgtctctggcattctcatcttgtacacatttattgctgtgtggtttgttggagggttgacctcattccacctctacttgatttctaccaatcaggtcagtgtttcttcagtagatgcacaaattagttttatttacaatttatgtacaagctaccgtattcaatgctcatccaatattaataattgcagacaacttatgagaacttccgataccgctacgataggaaaacgaatcctcataaccgtggactggtccagaatttcattgagatcctgtgttcaagaatccccagctccagaaacaacttcagggcaaaagtaaaggaagattctgccaccttcccctcatcactcggtatggggcgggcactaagtccgccgaagatgagtgtggacctcgagatgggaatgaaaaggcaaactgtggccatggaggaactggaagacttacacagccaaatcggcagtgctatggggctggagcgatgcggcactgaacccccacatattgtcggtcgaaagggctgctctgaaattgcaaccgacatagaagcatttgctgaagagtttggcctggaacaaaggttcactgagaggaagaagattgagcaacgtacaagtcataacccatagcgcattcctcccaatccttctataaccttcagaacctcacctaaaagtggcaaaatcttgggaggaaagaaaagtaggacaaatgttagatgatataatagttttctcggctgaaatttccagccaaattttcggtcatgagtaactggtgttgtttgtatatcaagtggttagtgtttaacaatacagacatggtgaagcattgaagccaaaggttttgctgtacttctggaatgctgggtctatgtactgtgagtccatctgctgtgctgtatatttggcagtgtgctactgaatttgtgttg</dnaseqindica> |
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