Os05g0461300

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0461300| Description = Similar to RAB8C| Version = NM_001062296.1 GI:115464322 GeneID:4339021| Length = 3203 bp| Definition = Oryza sativa...")
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Gene Name

Os05g0461300

Description

Similar to RAB8C

Version

NM_001062296.1 GI:115464322 GeneID:4339021

Length

3203 bp

Definition

Oryza sativa Japonica Group Os05g0461300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22695117..22698319

Sequence Coding Region

22695439..22695522,22695606..22695698,22695808..22695870,22696004..22696101,22696184..22696249
,22696334..22696434,22696537..22696609,22697902..22697974

Expression

GEO Profiles:Os05g0461300

Genome Context

<gbrowseImage1> name=NC_008398:22695117..22698319 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22695117..22698319 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcgccgccggcgagggctcgggcggactacgactacctcatcaagctcctcctcatcggggacagcggtgttggcaagagttgccttctcctgcggttttctgatggttccttcactacaagctttattaccacaattggtattgacttcaaaattagaacaatagagctggacgggaagcgtattaagctacaaatttgggacacagctggccaagaacgtttccggacaattaccactgcgtactaccgtggagccatgggtatcctgcttgtttatgatgtcaccgacgagtcatctttcaacaacattcggaactggattcggaatattgagcaacatgcctctgataatgtcaacaaaattttggttggcaacaaggctgatatggatgagagtaaaagggctgtccctactgcgaaaggccaagcactggctgatgagtatggcatcaaatttttcgaaactagtgcgaagacaaacctcaacgtggagcaagtttttttctccattgcacgtgacattaagcagaggcttgctgagaccgactccaagcctgaggacaagacaatcaagattaacaacaagacggatcagggtgccgacaaaccagcagcttctggatctgcatgctgcggctcctga</cdnaseq>

Protein Sequence

<aaseq>MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSF ITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESS FNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSA KTNLNVEQVFFSIARDIKQRLAETDSKPEDKTIKINNKTDQGADKPAASGSACCGS</aaseq>

Gene Sequence

<dnaseqindica>2798..2881#2622..2714#2450..2512#2219..2316#2071..2136#1886..1986#1711..1783#346..418#atcagtcgctcgctcgctcatgcggccggcgacgaatcaaccagcaaactaaaaaagcgaagggaaaaaaggagagaaaaaaaaaaccaactccctcctccccgttctccagatccgcaccgccaccgccgccgccgcgcgatcctccgccgcgcctaccggtgcggtctccgatccggccgccacccgcgcgggatccgccgccgccgtcgtgctgccattctcacggtgtctgtttttttttttttccgttcgctgcaggtcggggattggtggaggaggcgcgccgggtgggctgtggagtagggggaggaggaggaggagggtgtgaagcggagcgacgagatggctgcgccgccggcgagggctcgggcggactacgactacctcatcaagctcctcctcatcggggacagcggttggtgacaccacctcgagcttagatcttgccttcccatttccattccacggcgagtgatgtcgtgtgggttttcccgcgcctcggtgttggttggatcgcaggtggattgggccacgcgagcaactaggatcctgcaaaggatttgcctttggtgtgcgcttgtgtgcatgatctgtctttcatgtgaatttggtttctgttcaacctacaatatacataatgcctacttgcctagtacatacaggcaggaactaccactactgtgctttatgtaaaaaaaaaagaaaaagaagaagaagaagcaaagttaggagttatgaaaatggcgaggagaaaaaaaaatgaatttcgtggttcagtaagtttttccttggatggaagaaccttggaaatggtcaactggaattgcaggcttttctgattaagctgatactaaggttatttcgacagtgtgcaaggccatctgagaaacgttgcacataagcatgaagcaatgctttcttttttggcactcaatcatgcaataggagatagagttaaagagagtatgttatgtgctattctttcctctataattttcattcgttagtgcatgccatggaatttgtgctacatgttgttgagagtggaactagatagttccttgctcgtgagggtgtatgctccaaatgtgtagctgttggaagaaagttggagtgaggggtgaaactaatgggtcaaacattacagctatatgaaatagcgtaattgtttaaaagttcatagcagaaatttatatttttataccaatagctcaaatcaaccaggggcattttgtgctctcgctttgagccactacccgtagagcttccactatattccttgtcgagacttattcattgataggatcaaataagtgattgttttcatgacaattgccagattattcatgattgtctgtaacataaagctcgtgctctaataggtcttgatcttggattcttttgctcagtgatgactacttgtttttaattatgactatctatgatttagtcttttacaaattgtttttggttctttctagtatccaatgtaagtctattagttcaaattttctaggcataacctttggtagcatgctatttctctagcagttgtactgttttaaagtccataatatttacaaattcacttttgttagtgtattctgttgaactaattatttagtagctaatggcagttcctcaggcaagttttgtgctggccaattttcttataagaattcttttttctcatttttccatttctaggtgttggcaagagttgccttctcctgcggttttctgatggttccttcactacaagctttattaccacaattgggtatgttctctgatgttgggaagaccgctctatggctcctgcccgcaagcttttcaatttattatcttctccacgctgattgcagtatttgtgtttgtgcagtattgacttcaaaattagaacaatagagctggacgggaagcgtattaagctacaaatttgggacacagctggccaagaacgtttccggacaattaccactggtataattattgttccattcagcatactaaccctgtgaagttaaatgagaaccttttgatcaagtaaatctcattttacctcagcgtactaccgtggagccatgggtatcctgcttgtttatgatgtcaccgacgagtcatctttcaacagtactgtctccttacatatataccttccttaattattccattttgaactattttgtcactgctgttttatttgacaatacagacattcggaactggattcggaatattgagcaacatgcctctgataatgtcaacaaaattttggttggcaacaaggctgatatggatgagagtaaaagggtacatcacagtttttatccttggtgttcattcataccgtatccccactttgaagttgtggtcaaatgctcagttttccctgaggattactagttagaagcttatttgtttcctgttcttgttatttctccaggctgtccctactgcgaaaggccaagcactggctgatgagtatggcatcaaatttttcgaaactgtatgttgctgcctgaattgtttgttcttttcactgtcattttttttgaaaagaaagtggcctttgcagtgacaattgttttgattttacactgcactgtgtattccagagtgcgaagacaaacctcaacgtggagcaagtttttttctccattgcacgtgacattaagcagaggcttgctgagaccgactccaagcctgaggtacagataactgtacatactgaattatgtctcaaacatcatcttgctctttgttctaagaaacatatgctcctgcactgtaggacaagacaatcaagattaacaacaagacggatcagggtgccgacaaaccagcagcttctggatctgcatgctgcggctcctgaggagacgttcgccttctcggcctccatcgtttattatttgacattgtttgttccctgtcttgctgttataggaagaatgtcaagaagacacactatgatacggatctggttgtacctatctttgcttccattctttgaagcaactactcatgcttttgacgtagctgttgcaattgcctggggggctactactgtacgctggatttcaatccgttgaactgcaagctacagtgtgtaacgtagtccatgctgtattgctattgggttttcagttaatcaatggatgcatggaatagagtgatgctgttcctgcattttggct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0461300, RefSeq:Os05g0461300