Os08g0540500
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0540500 |
|---|---|
| Description |
SAM (and some other nucleotide) binding motif domain containing protein |
| Version |
NM_001068919.1 GI:115477576 GeneID:4346188 |
| Length |
3359 bp |
| Definition |
Oryza sativa Japonica Group Os08g0540500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27152829..27156187 |
| Sequence Coding Region |
27152953..27153147,27153948..27154062,27154370..27154417,27154519..27154771,27154936..27155023 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27152829..27156187 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27152829..27156187 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccaccaccaccgcgccggaggacgcgccgtccgcggccaagggggctaaaggagaggcgaagaggaaacagagcaactggcgtgggggaggaggaggcggcggcggccgcggcgacgggggtcaggggcagaagcggaagaggaaggaggtattcgtctacgggaactacaggaactactacggctaccggattgaccgtaatgttgatgaagaccctcgtcttaaaatatttaagagagagtggtttgaaagcaaggattgtcttgatattggatgcaaccagggtttggtaacgattggtctagctgcgaaatttaaatgccaaagcattcttggagttgatattgattcaggtttgatcgaaactgccaactggaatttaagaaggatgtctcgactggataaggtggttgtagaaaacaccaaggctcacaagtcatcagattcaccgtctgaaagctgtccggaaaaagtggcacctgagatatcaaatggggatatttctaatggcagtcatcatgatatttttaaagttgtttcttttcgtcgcgagaattttgtggacagcatgtgtacaagttcagaacagtatgatacaattgtttgtttgagtgtgaccaaatggatccacctgaactggggtgacgatggcataattactttatttgtgaagatctggagacttctaagaccgggtggagtttttattatggagcctcaaccttggacctcatataggagaaacagattggtttcagaggttgccaaagagaacttcaataccatcctaatacatccagataaattccgggagatacttctagacaagatcggattcaggtcggtagaggtggttacggacaaactggagggcgctgttactggttttgaccgcccaatcgaagtttaccacaaagtgatgggaactggatcaagttcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MATTTAPEDAPSAAKGAKGEAKRKQSNWRGGGGGGGGRGDGGQG QKRKRKEVFVYGNYRNYYGYRIDRNVDEDPRLKIFKREWFESKDCLDIGCNQGLVTIG LAAKFKCQSILGVDIDSGLIETANWNLRRMSRLDKVVVENTKAHKSSDSPSESCPEKV APEISNGDISNGSHHDIFKVVSFRRENFVDSMCTSSEQYDTIVCLSVTKWIHLNWGDD GIITLFVKIWRLLRPGGVFIMEPQPWTSYRRNRLVSEVAKENFNTILIHPDKFREILL DKIGFRSVEVVTDKLEGAVTGFDRPIEVYHKVMGTGSSS</aaseq> |
| Gene Sequence |
<dnaseqindica>125..319#1120..1234#1542..1589#1691..1943#2108..2195#2302..2367#2754..2822#2911..3024#aagtcggcggcgagggtttcgtctccttctcgccgctttgtcccgcgctgttcccctctcgtttcagctccagcacgaaccgcgccgcggcggcggcggcgagagaggcgtctcttctccgagcatggccaccaccaccgcgccggaggacgcgccgtccgcggccaagggggctaaaggagaggcgaagaggaaacagagcaactggcgtgggggaggaggaggcggcggcggccgcggcgacgggggtcaggggcagaagcggaagaggaaggaggtattcgtctacgggaactacaggaactactacggctaccgggtgagtgaacacccacccctccccctgtcgcttctcttgcgggcgcgcagatcgttgctgtgtgtatgagcgcaccaactgttcgatggaatgcctcgatggtggtcgcggtgctcgtgggattgggatggttcatgggtttggattggaacgctgaatggatatcagtcgaagctctcgcttagaatgtaccttagttacagtggtgtcatttctgatttaatttgttgtggtttgcagtagaccagtttaggttcttttattgggggcatgtagaatgtagataatcaaatttctgtttctattccgtttccttagttcagcattttgttgtttatcagaatgattgtgtcgggtatccaagtgaacaacaaatttcactatttcaggaaagcaaaatcgtctaatttactttgactgattatttagtcataacataagtaggtcgaggaagtgcccccataccctgcatatcataagtacacctggtggcgaaggaaggagtgaagtatcagggagcctagttagatcttgttgtttccttaagatttgccaatgccaaagtgtactgtagatttcttcagacaaggaggggggaagggtttatttcacattctacttgcagcgctgcatgtggtacttctcttagtacaatataaatcccattcgatggccggatactgcaatccttatcttgttttcgccggatactgcaatccttatcttgttctcatctgataaattctctcttctgatgtctctctattagcttatacatcctttcttctaatgttctacagattgaccgtaatgttgatgaagaccctcgtcttaaaatatttaagagagagtggtttgaaagcaaggattgtcttgatattggatgcaaccagggtttggtaacgattggtctaggtaaatcatctttgtgcaatatttagtactattttgtttggttgatgatctgtcttgtccatttgaacaaaaatgatatatctaattcataattgtatggttgtacagttacgttgttgtacctcttataaatagaattgggaattctgtatcaatgttaacagagacggtatttaaaatttaaactatttgcagtatatattcttttatctattcatatgtgttactgtaagatactttgtatgtctgtgttagttaaattttattactagtatggtttctcattttatttgtgaaccttgtgcagctgcgaaatttaaatgccaaagcattcttggagttgatattgattcaggtttgttaactaatgtttcatgtctttcctaggcaaacatattgttataaattttgtaaagctattttcttgctatactgatcctgatcttgtcctgttaggtttgatcgaaactgccaactggaatttaagaaggatgtctcgactggataaggtggttgtagaaaacaccaaggctcacaagtcatcagattcaccgtctgaaagctgtccggaaaaagtggcacctgagatatcaaatggggatatttctaatggcagtcatcatgatatttttaaagttgtttcttttcgtcgcgagaattttgtggacagcatgtgtacaagttcagaacagtatgatacaattgtttggtaagttacaaattataatatagatctcatagattttctgctgtcattaataatagtcactttgtcgtttttatattgcaacatatttgtgaaaattgccatcattacccacattggatgtcatattgacacatgcgtttttatatgcttttattctcatgcagtttgagtgtgaccaaatggatccacctgaactggggtgacgatggcataattactttatttgtgaagatctggagacttctaagaccggtatctatctgtctttatgtttcctgtgctttggtaaagtagatgtcaatgataagatgaaaaaaaataataaactattttcccactggattctcttgtttttcagggtggagtttttattatggagcctcaaccttggacctcatataggagaaacagattggtttcagaggtatcattttccccaatgccatactgatctctgacacccagttgattattttctggatcgcgttgaagtttgaaatgcttattgtgtttctatgtcagttgttgaaggctagagttattttactttcagccccttgcttgtgtaaaagctacagttgcggttgtggttttagctgcttgcttggctttatcgtcagtatgttggggcctcactcttactggacctgctttcttaaccccctgttatttcaatcttaagattactagaatgaacatactggcagaaatcttagtcctcattaaacatttgattcttccatgaccgcagttttttttttatcgtgcaaagttgcaatacctcactcttttttgtgttacatctttcaggttgccaaagagaacttcaataccatcctaatacatccagataaattccgggagatacttctagacaaggtatgttctaatgtcagccacgaattctatgttcagttcttggccccagcaacagaatttttgcctcaccatgcattgttccttgcagatcggattcaggtcggtagaggtggttacggacaaactggagggcgctgttactggttttgaccgcccaatcgaagtttaccacaaagtgatgggaactggatcaagttcttgacatttcctgccaaaggcatatgtggtgcttcagatgtgcagcttgttttagtgggattcattgagctccatgacgctttcttccattcgacaaacttcaacgatggcgccctcacataccgctggatttgcatttgcagaagactatttgaacgcccaaggaatgagatgggtagattggaactgttggtacgtcctctttggaagttttgacattttgtaggacgatcgatcggtttccaaaaaaaaaaaaaacattttgtaggtcgaggcagttttgcctgtgtaaatgaatggtggatacgtacgtatgaaaaatattgttcctcgaggaaa</dnaseqindica> |
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