Os05g0461900

From RiceWiki
Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0461900| Description = Cation efflux protein family protein| Version = NM_001062299.2 GI:297604615 GeneID:4339024| Length = 3711 bp| Defin...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0461900

Description

Cation efflux protein family protein

Version

NM_001062299.2 GI:297604615 GeneID:4339024

Length

3711 bp

Definition

Oryza sativa Japonica Group Os05g0461900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22716738..22720448

Sequence Coding Region

22716738..22716954,22718074..22718189,22718647..22718892,22719132..22719212,22719622..22719738
,22720095..22720448

Expression

GEO Profiles:Os05g0461900

Genome Context

<gbrowseImage1> name=NC_008398:22716738..22720448 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22716738..22720448 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccgcggcgggggtggctgctggaacgggaagaggtagcggggagggagaggagctgctccccaacgccgtggagggagacggcggctgcggcgggggcggcacgtgcgcgggggaccgcccgtggcggctcaacttcgacggcctccgccgcccggaggcgcaccaggagaagccgccgcgccgcttccatgaccgcctcggagggctagttcaaagccctggagatgatgttgcagaatattaccagcaacagtcggaattgttggaaggttttaatgaaatggatacactcacagatcgtggttttcttcctggaatgtccaaggaagaatgtgaaaaagttgccagaagtgaggcattagccatccggttatctaatatagcaaacatggttctttttgctgcaaaagtttatgcctcaataaggagtggttctctagctataattgcctccactttggattctctacttgacttgttatcaggttttatcttgtggtttactgccttttcaaagaaaacatcaaatccatacaggtacccaattggtaaaagacgcatgcaacctttgggaatacttgtttttgcttctgttatggcaacgcttggccttcaaattatcctagaatctacacgctcattgttttatgatggggatactttccgcttgacaaaagagcaggagaagtgggttgtggatatcatgctttctgttacatcggtgaagctcctactggttgtatattgccgttcattcaccaatgaaattctggcgatctacacaatcagaacatggtcaatgacggtgctagaaaacgtccactccttggttggccaatcggcttcaccagagtaccttcagaagcttacctacctgtgctggaaccatcacaaggctgtcaggcacatcgacacagtgcgagcatatacattcggctcccactactttgttgaggtggatattgttctgccatgtgacatgcccttgcaggaagcgcatgatatcggcgaggctccgcaagagaagctggagagcttgcccgagattgagcgggcttttgtccatctcgactacgagttcacccaccagcctgagcatgctcgatcccatgatacattatag</cdnaseq>

Protein Sequence

<aaseq>MAAAAGVAAGTGRGSGEGEELLPNAVEGDGGCGGGGTCAGDRPW RLNFDGLRRPEAHQEKPPRRFHDRLGGLVQSPGDDVAEYYQQQSELLEGFNEMDTLTD RGFLPGMSKEECEKVARSEALAIRLSNIANMVLFAAKVYASIRSGSLAIIASTLDSLL DLLSGFILWFTAFSKKTSNPYRYPIGKRRMQPLGILVFASVMATLGLQIILESTRSLF YDGDTFRLTKEQEKWVVDIMLSVTSVKLLLVVYCRSFTNEILAIYTIRTWSMTVLENV HSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPCDMPLQE AHDIGEAPQEKLESLPEIERAFVHLDYEFTHQPEHARSHDTL</aaseq>

Gene Sequence

<dnaseqindica>1..217#1337..1452#1910..2155#2395..2475#2885..3001#3358..3711#atggctgccgcggcgggggtggctgctggaacgggaagaggtagcggggagggagaggagctgctccccaacgccgtggagggagacggcggctgcggcgggggcggcacgtgcgcgggggaccgcccgtggcggctcaacttcgacggcctccgccgcccggaggcgcaccaggagaagccgccgcgccgcttccatgaccgcctcggagggctaggtactacctctctaactgtctctcgtgattggtggttctctggaactttcgtatcgtttgtgtttgggtgctattcgttttagttgtaggattgtttttgatctggacttgtgttttagctgttttagttagagaattcagatgtcagcgtcttatcctcttcagtgacggcgattgggtcaggtgatgtatagtgaacgtgtactggagaatggggagtggagaacttgcagcagcgatagttggtattactgatcagtgtgtttcatccactgatgtcccttttgtttagtagtagttgattggataccgtaatttgctgttactcaacagttttgtgccatgtctgttctgtaacgatggtgatcgatttataggtttcgttgtacgttcacattatatgataatttgtatttatgattgtattgtgttaataatatttgaaaccaatattatgtttgatagtggtgatagattttattactctgccatgagttactaattgaattatgatattaattattaagctgaagatattatattgaaaggcggaaagcgtacacatcctgagacctgttttcttaagaaattgttgtacccttttgatgctggtaaaatttactgaagggttgtttatggactgttgagttgactattttttacttcctgctttgatattttgtctttaagctgcatgtgtcaagcctttggtttctgttgtttgcaatttctaccttacagctatgtaacatggtaatttctagcaccaatttactgattctttcctctatatttcagtgctcaggaatctggatatttcaggtctgtatgttttatggaagaaaacactggttttcaaacagagatataagttttagctctaagtccaaagttctcattctgcagatgtagacaagaatgtttaatacagatggtggaagtcatttctttggtgtttgaaaattattatcaggataaaaaggtcatgtacaaaacaagtttaactaagttgactgttgagtctatttccaacttcgcactggtctcattgtgtggcattgcactcatcataatcagataacttagtattcttcttttgttatatacttctatttacagttcaaagccctggagatgatgttgcagaatattaccagcaacagtcggaattgttggaaggttttaatgaaatggatacactcacagatcgtggttttcttcctggaatgtccaaggtctacattcttgctctagtaaggccttgtttagttcgggaaaatttttgtgttgggttgtcacatcgaatatacggacatacatttgaagtattaaacatagtctaataacaaaacaaattacagattccgctaggaaactgcgagacgaatttattaagactaattaatccgtcattagcaaatgtttactgtagcaccatattgtcaaatcatggcacaattaggcttaaaagattcgtctctcaatttacacgccatctgtgtaattgtttttttttcctacatttaatactccatgcatgtgtccaaacattcgatgtgacagcgtgaacatttttgttttgggaactaaacagggcctaacattaaaagaaaaaaaacttcattttgcagataaaatgttgaaagatgcatctatactgttttctaccttaatttgatcctatctgtgcaggaagaatgtgaaaaagttgccagaagtgaggcattagccatccggttatctaatatagcaaacatggttctttttgctgcaaaagtttatgcctcaataaggagtggttctctagctataattgcctccactttggattctctacttgacttgttatcaggttttatcttgtggtttactgccttttcaaagaaaacatcaaatccatacaggtacccaattggtaaaagacgcatgcaacctttggtgagtttccacaccaataactgccaattaggcataatttgccctgcatgttctatgcttttatttcttgaatttttctattactagaataagtcaatcatttttgttgaactctgatttgctgtagtatccatttatacgttgtttaagagataagagagacataaactgtataaatcgttatgtttcttgatcagtattcctcttattaacgaactctgacacaatccgtttgccagggaatacttgtttttgcttctgttatggcaacgcttggccttcaaattatcctagaatctacacgctcattgttttatgatgtaagtcttttcttttctcttcttaccattctttgactgcttttttcaatacaattatttgattcatattgattagcgtagttggtttttcacttctctattcaatctaaaccttctagcagatattatcagaatgcctcatgttccatgtgcttttgaaaaaaagtcattttcacgtccctttaatgggggaagattttctaaaaaaaaggccaacttgtccgttttcaattttgtacatgcctgtttggtacacttatgatagttaatatgtgtgagtactccatttcgtatcgttgacaatcttgcacttaaacttaactaactgttaagcacaccgtaataaaaattaggacagtaacataatgatcagattaatcaggtagctattgattatcttgtgctccagggggatactttccgcttgacaaaagagcaggagaagtgggttgtggatatcatgctttctgttacatcggtgaagctcctactggttgtatattgccgttcattcaccaatgaaattgtaaaggcttatgcacatgatcactttttcgatgtcatcacctatgtcattgggcttgtggcagcacttctagctaattatgtttaaggctgtattgacccagttggggctattatagtaagtatactaaagtagtacttgctctgtataattccttgtttattagaatttcactgaaagaactatcatttcctagaattgtgagatacactatagaatttgagtatgtcacgaatttaatcgggtaagacaactattttggctatggaactgaatgatgcactagtgataaatcttctcacattcgacaataacttgaacttgaataggtttttattatctttccttctttgcagctggcgatctacacaatcagaacatggtcaatgacggtgctagaaaacgtccactccttggttggccaatcggcttcaccagagtaccttcagaagcttacctacctgtgctggaaccatcacaaggctgtcaggcacatcgacacagtgcgagcatatacattcggctcccactactttgttgaggtggatattgttctgccatgtgacatgcccttgcaggaagcgcatgatatcggcgaggctccgcaagagaagctggagagcttgcccgagattgagcgggcttttgtccatctcgactacgagttcacccaccagcctgagcatgctcgatcccatgatacattatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0461900, RefSeq:Os05g0461900