Os08g0546100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0546100 |
|---|---|
| Description |
Ubiquitin domain containing protein |
| Version |
NM_001068954.2 GI:297608933 GeneID:4346224 |
| Length |
3429 bp |
| Definition |
Oryza sativa Japonica Group Os08g0546100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27445420..27448848 |
| Sequence Coding Region |
27445420..27445890,27445968..27446472,27446688..27446734,27447851..27447973,27448044..27448249 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27445420..27448848 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27445420..27448848 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggacgtgggtgcgcgccgacgtggacgcgtcgccgtgctccacgtgtgccccggctgtcggtggcctcccttgcccgaggaagaagatagtgcagctctcgctgacagatggcccccacctgtcataggcacgcgtgcagcatccgacgattggcatacaggattcaggatttacctgtctgaagaattggactgttgttgtggcagctctcccatgcagggatgtctctgcttggccatattctgcttctgttcaccgaacaatgcagattttttgttggcttcagtcagcttcattttccacttcgtccccaacacattctccagtgtgggggcaaagctagcaactttacaatgcactcaagcatgcaagatgctaggcagcagcaatgcagtagtaatatctgaaattaaagaagatgccatctgcccagcagatagatcagcagaaggaattgagcatgatgaagcatcagatctcttcctcccattccttcttcgattcattcctgtctccaattggaggatagtactcctatatgagaagaagatgatgcgcgggaaggatcagaaatttccggcgatgaagaaggagacggcggcggtggcgaaggaggaggtgtgggaggtgcggcccggcggcatgctggtgcagaagcggagcccggagtcggagccaccgccgggcggcgcgccggtgccgacgatccgggtgaaggtgaagtacaacggggtgtaccacgagatctacatcaactcgcaggcgtccttcggcgagctgaagaagctcctgtcggagaagacggggctccaccccgacgaccagaaggtggtgtacagggacaaggagagggactccaaggcgttcctcgacatcgccggcgtcaaggaccgctccaagatgctcctcctcgaggaccccaccgcccaggccaagcgcctcctcgaggagcgccgccattgcaaggctgagcgcgccgccaagtccgtctcccgcgtcgccctcgacgtcgacaagctcgcctccaaggtgtcggcgctggaggcgatcgtgagcaagggcgggagggtggttgacgccgacgtggtggcgctcaccgaggcgctgatgaatgagctggtcaagctcgactccatcgccgccgacggcgaggtcaaggagcagcgccgagtgcaggagaagcgggtgcagaagtacgtcgaggccctcgacgccatccgtgccaagaccaagaaagcggcggcggcgccgcccaaggcccggccgccgcacctgccgccgcggccgccgccggcgcagcagcagcagcgccggcagttccagccgccggcgcccgccacggcgaccgcgccggcgccacagaccgcgacggccagctgggagtcgttcgacctgctctcatccgtgccgtccacgtcgtcggccccggtgaccaccatggcgccggcgaccaccaccaccacctcgccgtcgccgaggttcgagtgggagctcttctag</cdnaseq> |
| Protein Sequence |
<aaseq>MEDVGARRRGRVAVLHVCPGCRWPPLPEEEDSAALADRWPPPVI GTRAASDDWHTGFRIYLSEELDCCCGSSPMQGCLCLAIFCFCSPNNADFLLASVSFIF HFVPNTFSSVGAKLATLQCTQACKMLGSSNAVVISEIKEDAICPADRSAEGIEHDEAS DLFLPFLLRFIPVSNWRIVLLYEKKMMRGKDQKFPAMKKETAAVAKEEVWEVRPGGML VQKRSPESEPPPGGAPVPTIRVKVKYNGVYHEIYINSQASFGELKKLLSEKTGLHPDD QKVVYRDKERDSKAFLDIAGVKDRSKMLLLEDPTAQAKRLLEERRHCKAERAAKSVSR VALDVDKLASKVSALEAIVSKGGRVVDADVVALTEALMNELVKLDSIAADGEVKEQRR VQEKRVQKYVEALDAIRAKTKKAAAAPPKARPPHLPPRPPPAQQQQRRQFQPPAPATA TAPAPQTATASWESFDLLSSVPSTSSAPVTTMAPATTTTTSPSPRFEWELF</aaseq> |
| Gene Sequence |
<dnaseqindica>2959..3429#2377..2881#2115..2161#876..998#600..805#1..154#atggaggacgtgggtgcgcgccgacgtggacgcgtcgccgtgctccacgtgtgccccggctgtcggtggcctcccttgcccgaggaagaagatagtgcagctctcgctgacagatggcccccacctgtcataggcacgcgtgcagcatccgacggtacggatcacccgcaacggctttttacgtactcaatccgtttcatattttcatataaaaaaatcgtttgattttttttaatcaaactttgataagtctaattaagtttataaaaaaatttagcaacatctaaaatattaaattagttttattttaataatatgtttattttgtgtaactgtatggattgcgagaacaaaatatcagttatagaatgatgtggcagaatgtatatcaccattgctaacattttaagtatagacaaccaccgatctgatccgacgtggcaggtgacgtgtgcttgagtacgggcaagtacattttcatctcgaggcttctccggatcaccgtcgttaacgtaacacgtggagatgtaacaacagtaaaaaggccaattattattcagtttaccctactgcctttctttttctcttctgattggcagattggcatacaggattcaggatttacctgtctgaagaattggactgttgttgtggcagctctcccatgcagggatgtctctgcttggccatattctgcttctgttcaccgaacaatgcagattttttgttggcttcagtcagcttcattttccacttcgtccccaacacattctccagtgtgggggcaaagctagcaactttacaagttagcactaatagcactttaccaagttgttatatctttgatgaacgattgttatattattaatacacagtgcactcaagcatgcaagatgctaggcagcagcaatgcagtagtaatatctgaaattaaagaagatgccatctgcccagcagatagatcagcagaaggaattgagcatgatgaagcatcagatgtaggcgtgtacaagtgtaacgctgctgctttcaggaccatcctgaaagaaacaccctttcttaggctttaatttgtcctgcactaactgaacattttgcaaatggaggctttcttactctcttctttcttctaggcatctacccacatccatgcagtagcactagtacagtacttgttaccatcatatcatatcatatcaagaatggcactgcatatatacacaactgattgagtgtgtactagtaacagaaatgttccaacccatgattggggtgatgagcacaaagatgagagcaatgagcaattgagcattgcttgctctcctgccggtttgtatcagaagctgacacttggacgacatcaccaatggccgatgcttctctcgcagcacgtacactccaaggtactagtagtagcagagtaggagagaactttacagaagtgtatacacgaagcatatcatatattcatatcattcctagaaaacaaaaagcgaaagaaattaaaaaactaagagtagtagtagttggtaggattgtaatttgtcaggtgaggggtgaagttggcgagatagctctacagaagcagaaggctttgcttggaggcgaaggccggcaacgcggagatgaactgaagaagaaggagaagaaggagaagatcgagccgtaccaagcaagcagcttttgcaacaaaccaaaccaccaaccgatcgatcgaacaaaccaccattccccacacagccacgctcaccaacccaaaccgacgcgtagtcgacgagttcgatcgattgcccgaccgtatccgtacaattgctgacgcaaccaaaccatcacaaggttaaatacagtaaaagaaaaaataaagaaattctcttcttcttgtagtagaagaagatgatgccattggagttcttggccattgtataaacagggctaagctaggagaaggagccccacacttgtctacttgcaaggtggacaccattggggttgggttgggttgggggttgcttggttgcttgcattgcttagttttcatcagtataaatattctgctgccctgtcccttagttgtaccctgtctttttcttcctcctcataccctttcttcttagctcttcctcccattccttcttcgattcattcctgtctccaattggaggtcacaattgcagcttgcagctagctcaaatttccattttttgtttggttgtctctcggcagcaaagcagatatagagcagaggaaagctaagctaaattagttagttagattactagtctctggcagctgggtgatcttaatttgatcaaagaagaagaagaagaagcaagtttttttagctcctgagtatattataggattaactactactaggatagtactcctatatgagaagaagatgatgcgcgggaaggatcagaaatttccggcgatgaagaaggagacggcggcggtggcgaaggaggaggtgtgggaggtgcggcccggcggcatgctggtgcagaagcggagcccggagtcggagccaccgccgggcggcgcgccggtgccgacgatccgggtgaaggtgaagtacaacggggtgtaccacgagatctacatcaactcgcaggcgtccttcggcgagctgaagaagctcctgtcggagaagacggggctccaccccgacgaccagaaggtggtgtacagggacaaggagagggactccaaggcgttcctcgacatcgccggcgtcaaggaccgctccaagatgctcctcctcgaggaccccaccgcccaggccaagcgcctcctcgaggagcgccgccattgcaaggctgagcgcgccgccaagtccgtctcccgcgtcgccctcgacgtcgacaagctcgcctccaaggtagctaccccgctgctttgctttgcttgtcttctccgactccggcgtcgttgagctgtttggtggtgtacgtgcaggtgtcggcgctggaggcgatcgtgagcaagggcgggagggtggttgacgccgacgtggtggcgctcaccgaggcgctgatgaatgagctggtcaagctcgactccatcgccgccgacggcgaggtcaaggagcagcgccgagtgcaggagaagcgggtgcagaagtacgtcgaggccctcgacgccatccgtgccaagaccaagaaagcggcggcggcgccgcccaaggcccggccgccgcacctgccgccgcggccgccgccggcgcagcagcagcagcgccggcagttccagccgccggcgcccgccacggcgaccgcgccggcgccacagaccgcgacggccagctgggagtcgttcgacctgctctcatccgtgccgtccacgtcgtcggccccggtgaccaccatggcgccggcgaccaccaccaccacctcgccgtcgccgaggttcgagtgggagctcttctag</dnaseqindica> |
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