Os08g0554400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os08g0554400 |
|---|---|
| Description |
Zinc finger, C2H2-type domain containing protein |
| Version |
NM_001069001.1 GI:115477740 GeneID:4346276 |
| Length |
6254 bp |
| Definition |
Oryza sativa Japonica Group Os08g0554400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27821390..27827643 |
| Sequence Coding Region |
27821569..27822667,27825965..27826361,27826446..27826596 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27821390..27827643 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27821390..27827643 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcagccgcctcgtctgcacactacttcggtctcggcgagccgcagatgcagcagcagcagcagcagcctcccctgcagaacaacgcggctgctccggtcgcggccacgccgccgcccaagaagaagaggaatcagcccgggaatccaaatcctgatgcggaggtggtggcgctgtcgccgcacacgctgctggcgacgaacaggttcgtgtgcgaggtgtgcaacaaggggttccagagggagcagaacctgcagctgcaccggcgagggcacaacctgccatggaagctgaagcagaagaaccccaaggagacgcggcggcgggtgtacctgtgcccggagccgtcctgcgtccaccacgacccgtcgcgagccctcggcgacctcaccggcatcaagaagcactactcccgcaagcacggcgagaagaagtggaagtgcgacaagtgcaacaagcgctacgccgtccagtccgactggaaggctcactccaagacctgcggcacccgcgagtaccgctgcgactgcggcaccctcttctccaggagggacagcttcatcacccaccgcgccttctgcgacgcgctggcgcaggagagcggcaggattatgccacccatgggcgccgccctgtacgccgccgccggcgccggcatggccatcggcggcctcaccggcatggccgcctcccaccagctccaaccgttccaggaccactcctccgccatcaccaccgccgccaacgccgccgcgcagttcgaccacctcatggccacgtcgtccgccgcggccggctcccctgcgttccgcgccgcgcagccgacgtcgtcgtcctcctcgccgttctacctcggcggcggcggcgacgacggacaggcccacacctcgctgctccacggcaagccggcgttccacggcctaatgcagctgccggagcagcaggggagcaatggcggcggcctccttaacctgagctacttctccggcgggaacggcggccaccaccaccaccaccaggagggacgactcgtcttcccggatcagttcaacggcgtcgccgccgggaacggcgcccgcgccggcagcggcgagcacggcaacagcggtaacaacgccgactcggggagcatcttctccgggaacatgatgggcggcggcggcggcttctcgtccttgtacagctcgtccgaccagaccgtcccgccgccgcagatgtcggcgacggcgcttctccagaaggccgcacagatgggcgcgacgacgagcagcggcggcgccggcagcgtgaactcgctactcagaggtctcggaagcggcggcggcggcggcgctctgaacggtaagcccgccggagcagccgggttcatcatgtccggggagagctcgtcgaggagcactgcttctcagacggcggagaacgagagccagctccgggagctgatgatgaacacgctctcggcgaccgggggcggcaccggcgccggaacggtgttcgtcggcggcggcttccccggcgtggacgacggcaagctgagcacgagggacttcctcggcgtgagcggcggcgcgccggggcttcaactgcggcacggcggcgccgccgggatgggcatggccggctcactggaccaagagatgaagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAAASSAHYFGLGEPQMQQQQQQPPLQNNAAAPVAATPPPKKKR NQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKN PKETRRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSD WKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESGRIMPPMGAALYAAAGA GMAIGGLTGMAASHQLQPFQDHSSAITTAANAAAQFDHLMATSSAAAGSPAFRAAQPT SSSSSPFYLGGGGDDGQAHTSLLHGKPAFHGLMQLPEQQGSNGGGLLNLSYFSGGNGG HHHHHQEGRLVFPDQFNGVAAGNGARAGSGEHGNSGNNADSGSIFSGNMMGGGGGFSS LYSSSDQTVPPPQMSATALLQKAAQMGATTSSGGAGSVNSLLRGLGSGGGGGALNGKP AGAAGFIMSGESSSRSTASQTAENESQLRELMMNTLSATGGGTGAGTVFVGGGFPGVD DGKLSTRDFLGVSGGAPGLQLRHGGAAGMGMAGSLDQEMK</aaseq> |
| Gene Sequence |
<dnaseqindica>4977..6075#1283..1679#1048..1198#gctctctcgtcttcttcctctcttcttctccagccacaggcgccatatagtagcatatgctcctaagctagcttgttataccagttacgtcgtcgtcgtcgtcatcatgtgctatagctagctccaaacaaaacttggagaatttggagcgtacgtgtactagctagtatagattgcagcagctagctagcccagcagcaagaagacgaggagatagctgcagtctcgtttttggcttttcgaatttattataaccccggttcgtgtttgctagctctctatatatttctatctccatcgccttaattagagttttctcctcttccttttttcaacaaggagcctagcttgttttctttaacttgtttgttcggttctcgatctccatctcagatcgatgacatgtgatttattttttttggttttttctcctgcatgtgttgctgttcttcttctacctcggtctccatgccttatctcatgttattgaccagtctccttttttcaagctagctagtttctagctgccttgcttgtgagtatgtgcaacgtacgattgcatgtttttttttttggaactttggattaattagcttgtgaattaattcctctcttattaattccttgattaaattcccctctcgttttcgtttccttccccctttttgatttaatttgttgctttgttattagagaggatctgatcgatcagctgcaggtcagtcagtttgtctgtcctatggctgcacacagtacagatccatccaccatcttccatgctagctagcttcatccacgcatgtaattacctcttggatctctgcttaattttgtcttgattaattttcaggtcgtgcaaatcgaagaggattggaagtcagctggtagactagctagcgtccaagatacacatactactatcgaagagtgtgacttaattggattggattaattccatgcctatcttcttcttcagccacaatttaacagaacaagacaattagtctatcagtggtttgagctgattaactatcatcagagatagagatggcagccgcctcgtctgcacactacttcggtctcggcgagccgcagatgcagcagcagcagcagcagcctcccctgcagaacaacgcggctgctccggtcgcggccacgccgccgcccaagaagaagaggaatcagcccgggaatccaagcaagtatctcatttaatataattcctctgaatgaatttcgcagatgatcaattaattcaatgatgaattgataatgtacgtagatcctgatgcggaggtggtggcgctgtcgccgcacacgctgctggcgacgaacaggttcgtgtgcgaggtgtgcaacaaggggttccagagggagcagaacctgcagctgcaccggcgagggcacaacctgccatggaagctgaagcagaagaaccccaaggagacgcggcggcgggtgtacctgtgcccggagccgtcctgcgtccaccacgacccgtcgcgagccctcggcgacctcaccggcatcaagaagcactactcccgcaagcacggcgagaagaagtggaagtgcgacaagtgcaacaagcgctacgccgtccagtccgactggaaggctcactccaagacctgcggcacccgcgagtaccgctgcgactgcggcaccctcttctccaggtactctttatgtactactccctccgtctcaaaatataagtcgtcatcttcgtctttctattgcgaatcatactcccttccgtatgtcccagtagcaacttctggctatgcatctggtatatgtgcatgactgtgccagatgtataattaaaaagtttcatatttgagaacggagataatatctcttaaattctttgttttttttttgtttgtgatgtccctctgtggtctcaacagcaacttctggttatgcgtcttgtgtcagatgtatagctagaagttaccgtatatattttgagatggaggtgtagtatgtcttgaattattagatattccattagtttgcaagatgtggcaacctagagaattgtttggatttgggatgattccttttcatgtacttttatatattttgttcatcatatgattgagtcatgatgaacacactcatgaggaggaggtccgggcactgaaaggcacgagatgaatagctttggtagatactaggatagatggagatgatggtgatttgattgaagcagatggctctagctagctagctaggtcgccggccggcccgggtgagtactactacgtgttagggttagggttgtcaccactcgcgcatgctgcagtgaagaacagtaggtagtaacagtgtgactggccttgtacggttgtgtctctcgagtctttcttgtttggaaatttgattttgattccctttgcttactctcctcttacaacaaattaacttttcccattgatcattccatgagagagagtatataggattagtagcttagctggtcacacgtgaactgctcttgtccggagggggacacaaaggcaggcaggcaggccagctgagagaggccactgcagatcatgccgccatggtcatcttcttcctcctcctcttgaaaaggttcagaaagaaaaacaaaagccagtcatctttttcgactcggaatccgcaccatcttgatacaagtatccttctctctctgtctctctctcatcgtccctacgtgttcacgtgatgacaagagcccttgctagctgcaactgtagtactagtactctctgtatactcgtactacagcaatgtaagcaaggaccatggccatggtcatggcttgttctcttgtgacggatgggatgcatcagtactactctctcttgcattgcattgcatgcgatcgatgcatggagccatgcatacagactacagagacgacagctctattcttttcatggcgactgtgctagctactagcacgagcagctgcgttagcttaggtggtgtttatatctagggacttaattttagtctctgtatttagacactaatttagagtattaaatatatactacctacaaaactaattacataaatgaaagctaatttgcaagacaaattttttaagcctaattaatccataattagataatgtttactgtagcatcacatagtctaatcatagattaattaggctcaatagattcatctcgcgaattagtccaagattatggatgagttttattaatagtctacgtttaatatttataattaattttcaaacatccgatgtgatagagacttaaagttttagtcctattggccttactattcagcctgaaccacttgttgttgcattcggatcgatcgacatttgatgatgccactcggcgacctgatcgatctgctcatacatgcatgtgtaattagtaaccatttcatgtgtatacacacacacacacacatatgcagatatgctcttgcatccccatctgaaaattggaaccttgcttgcaattgtgtatgaatgttttggagagagggtacagtacagttacaccatgcatcttaatttgggtattgttgcattgacattctttctttccctttgttttgccttcccatttctggctttttgatcatgggctacagtcgcagtttgcacaatctgccgcatatatttggatatattggtacaaagacaatcaagcatgcatgtactactagtgaaattaagccaatgttttttctgtccacaaataaattccatgttgacatgcatgcacattagtatggtttttaattagtaaatagatatataattttcaacaatttttttgttgctatatatgttagcaaaggatatttgatggtaccatatatatgtttatgtaattttgtgtataagttagatagtgcttaaattgggggaaaacttcgtgtgctattaaacagcagtatgatatatgtctcgaaagctatatgctcaatttagcattgcaatggatcttgatattctagtttgattaattgctcttttagacatttcttcatttattaatttggcgaactgtttttttctcataaccgatggtattattgaatttaaaaaaaaaaagataactggagtgacaagttgaacgtatatattgatctgtaaaacaaatcataatgttcacattttctgttttcacatcaacttaattaattaaaagataaatgttgtgctggctgcacaacgaaacaactatatacaagatgagtgaattaaatgacaagtgaataaaagaagaaagtgaatttgaggtgaacatgtgaatgcacatataccaacctgctacccttcaaattacttattgttttagcttgatctcctaagtcaaatatgtttatcttaatttggccattggtttctagaaaaactgtacttttcaaggtatattatgaagatatttttcaaggtaaatctgaaaacatgcataaatcacactgatgctaaactatacaactgtttaaaaattgatggtcaaatatatggatgtttgagaccgaggataaagatagaacggcaagtaattaatttaaaaccaatcaagtagtgtatttcttcccaacttcattgtgtatagcatcatgatcagtatcattattatctctagctaggagtaaattgtatactccctccgtccctaaatgtttgacgccgttgacttttttaaacatatttaacagttcgtcttattcaaaaaatttaagtaattattatttttttcctatcatttgattcattgttgaatatacttttatgtatatatatagttctacgtattttacaaaagtttttaaataagacgaacaatcaaatatgtttaaaaatattaacgacatcaaatatttaagaacagagggagtatatatcttgcttataaagattaataattaagtggcacatcatattgatcaccgtgaaaaaaaaaactttgtaccacatgcaggagggacagcttcatcacccaccgcgccttctgcgacgcgctggcgcaggagagcggcaggattatgccacccatgggcgccgccctgtacgccgccgccggcgccggcatggccatcggcggcctcaccggcatggccgcctcccaccagctccaaccgttccaggaccactcctccgccatcaccaccgccgccaacgccgccgcgcagttcgaccacctcatggccacgtcgtccgccgcggccggctcccctgcgttccgcgccgcgcagccgacgtcgtcgtcctcctcgccgttctacctcggcggcggcggcgacgacggacaggcccacacctcgctgctccacggcaagccggcgttccacggcctaatgcagctgccggagcagcaggggagcaatggcggcggcctccttaacctgagctacttctccggcgggaacggcggccaccaccaccaccaccaggagggacgactcgtcttcccggatcagttcaacggcgtcgccgccgggaacggcgcccgcgccggcagcggcgagcacggcaacagcggtaacaacgccgactcggggagcatcttctccgggaacatgatgggcggcggcggcggcttctcgtccttgtacagctcgtccgaccagaccgtcccgccgccgcagatgtcggcgacggcgcttctccagaaggccgcacagatgggcgcgacgacgagcagcggcggcgccggcagcgtgaactcgctactcagaggtctcggaagcggcggcggcggcggcgctctgaacggtaagcccgccggagcagccgggttcatcatgtccggggagagctcgtcgaggagcactgcttctcagacggcggagaacgagagccagctccgggagctgatgatgaacacgctctcggcgaccgggggcggcaccggcgccggaacggtgttcgtcggcggcggcttccccggcgtggacgacggcaagctgagcacgagggacttcctcggcgtgagcggcggcgcgccggggcttcaactgcggcacggcggcgccgccgggatgggcatggccggctcactggaccaagagatgaagtaattaattaattattatattaattaaccaccagattattagggttcatcgatgcatcatgcaagcatggaactagctaatcaatcgatcgatcgatgagatgatcaagttaatggtggattaatgtggtgttttgattatttaatttaggtggatcaactggtgataatgcatgttaattg</dnaseqindica> 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