Os08g0558800

From RiceWiki
Revision as of 20:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0558800

Description

Similar to 60S ribosomal protein L10a-3

Version

NM_001188771.1 GI:297726672 GeneID:9266191

Length

2274 bp

Definition

Oryza sativa Japonica Group Os08g0558800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28051209..28053482

Sequence Coding Region

28052321..28052416,28052854..28053054,28053214..28053267

Expression

GEO Profiles:Os08g0558800

Genome Context

<gbrowseImage1> name=NC_008401:28051209..28053482 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28051209..28053482 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaagcttgccaagaagtaccatgctttcttagcatcagaggccatcatcaagcagattcctcgtctccttggtcctggtctcaacaaggcaggcaattccctacattggttactcaccaggagtctcttgaatccaaggtcaacgagacgaaagctacagtcaagttccagctgaagaaggttctgtgcatgggtgttgctgtgggtaacttgtcaatggaggagaagcagatccagcaaaacatccaaatgagcgtcaacttcctcgtgtcccttttgaaaaagaactggcagaatgtgaggtgcctttacatcaagagcaccatggggaaaccaatcagggtgttctaa</cdnaseq>

Protein Sequence

<aaseq>EACQEVPCFLSIRGHHQADSSSPWSWSQQGRQFPTLVTHQESLE SKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRC LYIKSTMGKPIRVF</aaseq>

Gene Sequence

<dnaseqindica>1113..1208#1646..1846#2006..2059#tcgccgccttctctcctctcgcgccgtttcgctccctgaccctccgccgccgccgccgccgatcatcatgaggtgattcccgccgcccaatctctacttcccttcttacggttaacgaatctcttctattgcttagtttctgtcgctatggccttctgtgattctgcgcgcttgctttgttagatcaaagctcttattaagatgtaagaagatgatatggaattcggacgatttgtttagtttatgtctcattaaagcgatggatctcgagatagactgggatcacgtagctgtacaccttgcatgatctagagttttctgcttctcgctagagatcagtggcgctagctagattatgtctgaatataggttactgatcggtataagaaatgctcgttctttgtttcctgaacaaaattcacgtgctgagcttgcgtgatcaattgcagtaagttgcagagcgaggttctcaaggaagccatctcccaggttgttggggaatccaaggagaagggcaggaagttcaccgagaccgttgagcttcagattggtctcaagaactatgacccgcaaaaggacaagcgtttcagcggctccgtcaagctgccccatatcccccgccccaagatgaaggtctgcatgcttggtgatgcccagcatgtcgaggaggtaagattatgatgccatacccattttgattttgtaaatttgtacaccctccgtttagattgaaattgaggattttcctttctcactcatgtaagtgaccttagattatttaagtctttgttttacattcttgtagtatcttaactgaaacatatttcatatttttaatttgtttggttgaattattatttgtgccttgcctgatatattgtctgggtccttctccattgcatctcaagtgttgtatgctatgtataattggctggagtctgaaattaagaatgttcacacgttgtttgtggatcaatttattctgtctaatgagaatttatttatctgccaacttgctgcggattggctcgtgtgcaggctgagaagattgggcttgactacatggatgttgaggctcttaagaaaatgaacaagaacaagaagctggttaagaagcttgccaagaagtaccatgctttcttagcatcagaggccatcatcaagcagattcctcgtctccttggtcctggtctcaacaaggcaggcaagtattccattttctgacattcttgctttttcttggtgtagttctgaattttaacgagtgcatgctagtttttcttggtgtagttttgaattctaatgagtacatgctagtttttcttggtgtagttatgaattctaacgtgcacagtattgtttcatatgcctcactgctacctgaatagtactacaaatttatagttgacctgcagtgaaacataactatcatctaggtgttacattgtatttcatttttcatggcgttgtctttttatgctaatttcatgccaactgttaactgttgtaggacctaaactgtccaattggaccttaatctagtaactgtgtgaagtttacccatatgtttttttagactctggctagttggggtttaccaaggcagattggttaattgaatcattttgatcacactgcaggcaagttccctacattggttactcaccaggagtctcttgaatccaaggtcaacgagacgaaagctacagtcaagttccagctgaagaaggttctgtgcatgggtgttgctgtgggtaacttgtcaatggaggagaagcagatccagcaaaacatccaaatgagcgtcaacttcctcgtgtcccttttgaaaaagaactggcagaatgtgagttatctgttctgagcctgtttgcatgcaattaaacttacagctcaaatctgtttaacaacatagtgaatatatatgagttttggccttgctttgaataatagttttatgtgagaaaacaactgatgataacttggaattgtttgtgtttgataggtgaggtgcctttacatcaagagcaccatggggaaaccaatcagggtgttctaagttggtgtgttccacctagaagtgaaaaggatcagttgaaaccaagcttttcctcttaaaatagacctgtcgctctgggaccggcttttgtctgtcagtgcaagagaatatatcaaagaaatatctggaccttatttttgtagcgtgtttatttgggagtaacttattctacgtaagcttctaatgtggaaattctatgtgtgttatgctgctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0558800, RefSeq:Os08g0558800