Os08g0561500

From RiceWiki
Revision as of 20:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0561500

Description

Similar to Nodulin-like protein 5NG4

Version

NM_001069047.1 GI:115477832 GeneID:4346327

Length

2837 bp

Definition

Oryza sativa Japonica Group Os08g0561500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28206737..28209573

Sequence Coding Region

28206862..28207080,28207226..28207814,28208907..28209364

Expression

GEO Profiles:Os08g0561500

Genome Context

<gbrowseImage1> name=NC_008401:28206737..28209573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28206737..28209573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatcagaatggcggcggaggcggatgcacggaaggtgtgcgggttgccggagcgggtgcagctccatggggcgatgctggcgctgcagttcggctacgcggggttccatgtggtgtctcggtttgccctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatcctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgacgctgagcttcgtggtgcagttcttcctgctggcgctgtgcggcatcaccgccaaccagggcttctacctcctcggactcgacaacacctccccgaccttcgcctccgccatccagaactccgtcccggccatcaccttcgccatggccgccgcgctccgcatcgagcgcgtccgcctcgaccgccgcgacggcgtcgccaaggtgctcggcacgctggcctgcgtcgccggcgcctccgtcatcacgctctacaagggccctaccatcttcggtcccaagctgcagctgcaggcggtggcggaggtgccgttgagggcggcgatcgccggagaggggaagaactggacgctgggctgcgtgtacttgatcgggcactgcctgtcgtggtcgggatggctggtgctgcaggcgccggtgctgaagaagtacccggcgaggctgtcggtgacgtcatacacctgcttcttcggcgtcatccagttcctcatcatcgccgccttcatggagagggacgccgacgcctgggccttccactccggctccgagctcttcaccatcctttacgccggattcatcgcgtcgggggtggcgttcgcggtgcagatatggtgcatcgacagggggggcccggtgttcgtggcggtgtatcagcccgtccagaccctggtggtggccatcatggcctccctcaccctcggcgagagcttctacctcggcggcatcatcggcgccgtcttcatcatcgccggcctctacctcgtcctctggggcaagagccacgagcgtgctcgcctcgccaaggacgccgccgccattgccaccgaccgcgacgccgccccttgccggatcatcgccgccggcaagcagtcctcctccgtcacccagcccctcctgctgcctacctcctcctcctccgacaacgccgtctgaccgatcgatcggtctctttattaattacatgcgtgcatgcttcgagccatttgatcgatcgattagctgctagtactacagacttagcttgttga</cdnaseq>

Protein Sequence

<aaseq>NQNGGGGGCTEGVRVAGAGAAPWGDAGAAVRLRGVPCGVSVCPQ HGHQQARLPRLPQHHRPHPPRPLRLFPREEGSAAADAELRGAVLPAGAVRHHRQPGLL PPRTRQHLPDLRLRHPELRPGHHLRHGRRAPHRARPPRPPRRRRQGARHAGLRRRRLR HHALQGPYHLRSQAAAAGGGGGAVEGGDRRRGEELDAGLRVLDRALPVVVGMAGAAGA GAEEVPGEAVGDVIHLLLRRHPVPHHRRLHGEGRRRLGLPLRLRALHHPLRRIHRVGG GVRGADMVHRQGGPGVRGGVSARPDPGGGHHGLPHPRRELLPRRHHRRRLHHRRPLPR PLGQEPRACSPRQGRRRHCHRPRRRPLPDHRRRQAVLLRHPAPPAAYLLLLRQRRLTD RSVSLLITCVHASSHLIDRLAASTTDLAC</aaseq>

Gene Sequence

<dnaseqindica>126..344#490..1078#2171..2628#caagctgcatgctagctagctaattaagctccccagctcgattcctagctatctaattagctagcgagggatcgatcgagagcttctccttccgggcttccggccagccggcggggaatagctagaatcagaatggcggcggaggcggatgcacggaaggtgtgcgggttgccggagcgggtgcagctccatggggcgatgctggcgctgcagttcggctacgcggggttccatgtggtgtctcggtttgccctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatcctcctcgtccccttcgcctatttcctcgagaagtatatactgtctgctgtttaatttctgaattgaacctccgtcctcctagagtttcagtcagttgtaatctcgatcgatcgatcgatctgtagtgtaggtagctaacaattaattaatgtagacgaacgtggatgatggatgcaggaaggatcggccgcagctgacgctgagcttcgtggtgcagttcttcctgctggcgctgtgcggcatcaccgccaaccagggcttctacctcctcggactcgacaacacctccccgaccttcgcctccgccatccagaactccgtcccggccatcaccttcgccatggccgccgcgctccgcatcgagcgcgtccgcctcgaccgccgcgacggcgtcgccaaggtgctcggcacgctggcctgcgtcgccggcgcctccgtcatcacgctctacaagggccctaccatcttcggtcccaagctgcagctgcaggcggtggcggaggtgccgttgagggcggcgatcgccggagaggggaagaactggacgctgggctgcgtgtacttgatcgggcactgcctgtcgtggtcgggatggctggtgctgcaggcgccggtgctgaagaagtacccggcgaggctgtcggtgacgtcatacacctgcttcttcggcgtcatccagttcctcatcatcgccgccttcatggagagggacgccgacgcctgggccttccactccggctccgagctcttcaccatcctttacgccgtacgtatctatctccattctccctacgtatacgatctccatctattcacctacgtatacgatccatatgcatgcattactgctggtctttcgattattcctacctccaaatatcaacatgcaaattaattaattaattatttactgatcagctcatcttatgccaacctaattaagctagctagtagtggacaggactatacatacgtgcaacgattaatttattaagctaatctacagcctactttgtgttaattatatctgcaccagctcatggtcactttaatttattgacaatcattctgtatactgtactggattgaaaaagggccggaaatccatatgtacacttttcaatagtagtaactattttgtgacattaggaatataaatacatgcttgcaaatgtccatattgtatttaatttgtcctgctttagttaattagcacttagtactggtatatatctgtcagtaaagtaatgcaagttgatcgatttctgcggcagcagcagagtattatagcaagcatggtgcaacacagaagctagctgtacaaatgatcactttttttccgtaggataacatgctgggttgtactatatagttatcaatcatgcccttaaagttacctttggacgtttgtttgtcgacacacatcgccggcccataatgcatccgaccatgtactcctagcatgcatatatacagtacacttggctggaatatatacagtacttacttttccaatgaggacatgtttagtagggcttaatataaaatcataaatttaactcaaaagttaagcttggagtaaagttttagagcagcctaaacattactttaccactctagttaattttgtggtagtattttagtcaactccgctttcttttttaacggagctgaatctatttggtcgagcttcagcttcaaaagaggagttggagttgaagctagccaatgcatgaatcttcttaagccaaactaaattgttaactgcttaattaatcaatgaagtgcatggtttgcataatgaaactgaagatgagatgtgagagctgatgggggtaggtggtgatgatggatgcagggattcatcgcgtcgggggtggcgttcgcggtgcagatatggtgcatcgacagggggggcccggtgttcgtggcggtgtatcagcccgtccagaccctggtggtggccatcatggcctccctcaccctcggcgagagcttctacctcggcggcatcatcggcgccgtcttcatcatcgccggcctctacctcgtcctctggggcaagagccacgagcgtgctcgcctcgccaaggacgccgccgccattgccaccgaccgcgacgccgccccttgccggatcatcgccgccggcaagcagtcctcctccgtcacccagcccctcctgctgcctacctcctcctcctccgacaacgccgtctgaccgatcgatcggtctctttattaattacatgcgtgcatgcttcgagccatttgatcgatcgattagctgctagtactacagacttagcttgttgagaaccaaatgatgttgatgatttgcctttgcctatgatatcgatcgacattaaactagctagtagcttgcttgttttgctaggatttgttttgtttggatcatgcttgtgctttcttaatttgtaacgtcgcgagagattaattgctcaatgatgcttgtgctacattttgtataattaatgtacctacatgtgtgcttcattgtacct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0561500, RefSeq:Os08g0561500