Os05g0464100

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0464100| Description = MCM family protein| Version = NM_001062312.1 GI:115464354 GeneID:4339038| Length = 4663 bp| Definition = Oryza sati...")
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Gene Name

Os05g0464100

Description

MCM family protein

Version

NM_001062312.1 GI:115464354 GeneID:4339038

Length

4663 bp

Definition

Oryza sativa Japonica Group Os05g0464100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22835084..22839746

Sequence Coding Region

22835219..22835416,22836004..22836135,22836246..22836357,22836444..22836664,22836740..22836905
,22837681..22837926,22838556..22838651,22838748..22838900,22839472..22839593

Expression

GEO Profiles:Os05g0464100

Genome Context

<gbrowseImage1> name=NC_008398:22835084..22839746 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22835084..22839746 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacgacgatggtcctcgcaagggaaaacccggcggcctctccatggacgccgccaccgccgcggggctcgcggcggtctggccggagtacttcccggaggagagcgagttcgccgcggacggccgcagcgcgcgcctcgccgccgacctggtcgacctcttctcctcccccgacgcgagcgacctcctctcgcgagtcgaagatgatggtgatatcctctcccttccagttgatttccagcagctatcgaatttgacctggattactgaagctctccaggaaaatccaaaagaagccttgctttccatgggagctgcagttcatctgattgtgtgtgctagcagggacttgcagttgggcgacatcaacaaaatcaatatcaggctttacaaccacaccaagactattgccttgaagaatttaaaagcggcgtatattaagaaacttgtgacagtgcgtggaacagtcttaaaagtaagtacggtgaagcctctagtgctgcagctgaatttccaatgcatgaaatgcgctacaaaattccctcgtgtgttctgtgatgggaagttttcacctccagtatcgtgcagtattcagggatgcaagagcagaacattcataccaatgagatctactgcaaagttgatggattttcagaaaataaggatacaagagcttgctagtggtgaaagccatgaagaaggcagagtgccacgaactatagagtgtgagcttacagaggatcttgtagattgttgcatccctggagagactgtaacagttactggaatcgtcaaagtactgaacaactacatggatgttggaggagggaaatccaaaagcaggaaccaaggtttatactacctgtacctggaagcaatttcagtaagaaactcaaaggtccatgctgcttcaggaaattcagatgctgctagtggatctttcggttttcaagcttttactgaaaaggatcttgaattcatctccaaatttaaggaagaacacggtgctgatgtttttcgtcaaattcttcactccttttgcccctctatctatggacatgaacttgtaaaagctggtatcacccttgcgcttttcggtggtgtgcagaagcactccattgatcaaaacaaggtcccagtgagaggagacattcatgctgttgttgttggtgatcctggactaggcaagagtcaactgctacaggctgcagcagctgtttctccacggggtatatatgtttgtgggaatacaacaacaaatgctggtctaactgttgctgtggttaaagattctatgtcaaatgattatgcatttgaggctggtgccatggtccttgctgaccgtggaatatgctgtatcgatgagttcgataaaatgtcagcagagcatcaggttttaaccttgtataagcttcactctgaaatgttaattagaaagccctaa</cdnaseq>

Protein Sequence

<aaseq>MYDDGPRKGKPGGLSMDAATAAGLAAVWPEYFPEESEFAADGRS ARLAADLVDLFSSPDASDLLSRVEDDGDILSLPVDFQQLSNLTWITEALQENPKEALL SMGAAVHLIVCASRDLQLGDINKINIRLYNHTKTIALKNLKAAYIKKLVTVRGTVLKV STVKPLVLQLNFQCMKCATKFPRVFCDGKFSPPVSCSIQGCKSRTFIPMRSTAKLMDF QKIRIQELASGESHEEGRVPRTIECELTEDLVDCCIPGETVTVTGIVKVLNNYMDVGG GKSKSRNQGLYYLYLEAISVRNSKVHAASGNSDAASGSFGFQAFTEKDLEFISKFKEE HGADVFRQILHSFCPSIYGHELVKAGITLALFGGVQKHSIDQNKVPVRGDIHAVVVGD PGLGKSQLLQAAAAVSPRGIYVCGNTTTNAGLTVAVVKDSMSNDYAFEAGAMVLADRG ICCIDEFDKMSAEHQVLTLYKLHSEMLIRKP</aaseq>

Gene Sequence

<dnaseqindica>136..333#921..1052#1163..1274#1361..1581#1657..1822#2598..2843#3473..3568#3665..3817#4389..4510#gagcttcacgccgtcctcgctcgccgcgctaaaaatttcgctccgcccgccccccaactctcctctcccgccgccgccgccgctgccgcgcaactcgccggagagagaagggagcggcccatttctcaggcgaacatgtacgacgatggtcctcgcaagggaaaacccggcggcctctccatggacgccgccaccgccgcggggctcgcggcggtctggccggagtacttcccggaggagagcgagttcgccgcggacggccgcagcgcgcgcctcgccgccgacctggtcgacctcttctcctcccccgacgcgagcgacctcctctcgcgagtaagcggtggctcccctcccccatttcattcctctgcggcgttgcccttcgagctctcctcacggcggaccggcggtgcccatgctagggttccgcgcttgtggtatggtccgattgttgagatcggttcatgcgtgatcggtgttacaacttagaatatatcagtggtggcatttctcgataatgtctacgattttagcggatggacgctccaatcgttaattgaaatgttctggaaatcgcaactaaagtgagtactgtgagcaattcataaatgtttttctaaggaatcttcgcaagtgtttactttgtcttaaacaagagcaagtgtttaagcttgtaaaggttcctgttatagtgttattacctatttaatttagctcgttcagggagcttgcaactcgatgttaatgggcgtttagtttctactctcttaatgccttaattgcgaatgcatgaatttcatatgaattaggaaacaattcaatcattgcaagaatcttaaaatgcgaatttgtaatttactctctttggttaatgtggttactagtagttaccacttacaacttcatggcttcatgcacaggtcgaagatgatggtgatatcctctcccttccagttgatttccagcagctatcgaatttgacctggattactgaagctctccaggaaaatccaaaagaagccttgctttccatgggagctgcagttcatctggttgatgtttctattcatgttttcctagaattaatgagcctgttacttttgtagtgctttcatgtttggtccactatacctgatatgtcagttcttgatattttcttcagattgtgtgtgctagcagggacttgcagttgggcgacatcaacaaaatcaatatcaggctttacaaccacaccaagactattgccttgaagaatttaaaagcggcgtatattagtaaatgtcattctgccttttatcatcgcgtgctaaagtttgtgcacatataaatcaaagtactaatttgtagattcacttggcagagaaacttgtgacagtgcgtggaacagtcttaaaagtaagtacggtgaagcctctagtgctgcagctgaatttccaatgcatgaaatgcgctacaaaattccctcgtgtgttctgtgatgggaagttttcacctccagtatcgtgcagtattcagggatgcaagagcagaacattcataccaatgagatctactgcaaagttgatggattttcagaaaataaggcaagtgataaataaactactacattatcctttatttatggtactaaagcttttctcatattgtttccaaatcaggatacaagagcttgctagtggtgaaagccatgaagaaggcagagtgccacgaactatagagtgtgagcttacagaggatcttgtagattgttgcatccctggagagactgtaacagttactggaatcgtcaaagtactgaacaactacatggatgttggaggaggtacaatttttgagaaattaatatttctttgcattacttctttttctaaaccttgtggatttactggctcacacacaggcttcaaattttgcgttttcattggcaatcattggcaaaaaatgtttatctataaatgcctcagatttgttcacaacacctatagaggcacatatgctgtcagcatcttgttttatttgatcattaatctgattggatgttaatgttctgattagagagccttggccatctaccatgtgacattacgattttttttttctagatggagcagttgaaaagaaaatagcatttgagcaaagcaagaaaatagctttctatttttttgtttcttccagaccatatatcctaaatctgatatatagaaatcagaatcaccagatcaactcatggactactgagcataaacagttcattagaagcattattatagtccatgttaactatagggaaacctatctaatgctgtatttggcagcatgagggtatctattttacctctcccccactttacattcttagaacttgcaagatcatttggtctttgttagatatatgcatgctttctatgagctccttgaatttaagaatcaagaaattatttataggataatggagaacaaattagttatgatgtacagccttactattgtttgacccttacccgctgatgccatatatgcagataaactcttatttgatctgagcttccccccttctaatttcttaattttacacaatatttcatttgtatcttcagggaaatccaaaagcaggaaccaaggtttatactacctgtacctggaagcaatttcagtaagaaactcaaaggtccatgctgcttcaggaaattcagatgctgctagtggatctttcggttttcaagcttttactgaaaaggatcttgaattcatctccaaatttaaggaagaacacggtgctgatgtttttcgtcaaattcttcactccttttgcccctctatctatggacatgaacttgtaaaaggtattggtattatacttatcttccatctactatttaatgtggttaaagatttaaatttaattcactctgagctgacccaataacggaatgaaatattttggtgaaacctaccgctccccttaatttctgtttacacgaaatgagataacaattcctttttttctttttattcaattagttctggaccgctgcagcattttctgcccaaatgatcttctataggaactctcttgtgctgcatgaaaaaaatgagaatgtatctcccaagctcctaaactgtgatttttgcaaaaactttctatatataaattgcttagaatacttttcaaaaacaacttttgcactttgtaataattaattcattcgtttgtacccttgaatattatcataaaatcagataatctatcatctattcatctattcagaacaatcaaactgggggtggtgaaattgactaagctactggtagttcccgttctctgagatatgtgtgttctccttttcaactagagcatacagcacccattctactacactactgtttacaaacatgccagcccttcttggtccttttcctgctttgcattttattgctagatacaactaaatgaatatttccaatttttcagctggtatcacccttgcgcttttcggtggtgtgcagaagcactccattgatcaaaacaaggtcccagtgagaggagacattcatgctgttgttgttggtaatccttcacttatagagggtctaagcttcttggtaagaattttcttagcatttctcacagtgcaattaaaactcttgctcaatgcaattctaggtgatcctggactaggcaagagtcaactgctacaggctgcagcagctgtttctccacggggtatatatgtttgtgggaatacaacaacaaatgctggtctaactgttgctgtggttaaagattctatgtcaaatgattatgcatttgaggctggtaagcatatgagattgtcctttgtcccttccctagactgttgtttaagttctgttacctaactggctgtctgtcctggtgggtttttgtcttaaaacctgtgagtggaacaaaataagtactcccgttgttccaaaatataaggatttctagaactcaaaacattgtactccctccgtcccataatataagggatggtatgtccagattcatcgtattaggatgtgtcacatccacccaaaatcctttatattacgggacggagggagtaccagatataagcatttctgggcactgattccaacgcacagaaatccatatattttcagccaatcagttgtttcatgttcgagaggggaatctaagcaattcaaaatttgacaactgagatgactaaaagggaatcttttcccttaacttcattatttgctaaaaaaaacctagaaatgcttatattctggaacggagggagtaggatgcaagtgggtctggtagtattttttttcttgactaatttaatggcacatacataaagtggcctatcaaataattttgaccctttggtttacaggtgccatggtccttgctgaccgtggaatatgctgtatcgatgagttcgataaaatgtcagcagagcatcaggttttaaccttgtataagcttcactctgaaatgttaattagaaagccctaacctgccacatcatgtttctaatgaatttgagttcataggctttactggaagccatggagcagcaatgtgtatctgtggcaaaggctggccttgtggcaagtttatcagcccgtacttctgtgctagcggctgctaatcctgttggtggtcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0464100, RefSeq:Os05g0464100