Os09g0130800
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os09g0130800 |
|---|---|
| Description |
DEAD/DEAH box helicase, N-terminal domain containing protein |
| Version |
NM_001069156.1 GI:115478051 GeneID:4346450 |
| Length |
6132 bp |
| Definition |
Oryza sativa Japonica Group Os09g0130800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:2301574..2307705 |
| Sequence Coding Region |
2301903..2302151,2302334..2302491,2302651..2302819,2303796..2304839,2305792..2306075 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:2301574..2307705 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:2301574..2307705 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctatcaagcttacaaaatatcagttcttttcttctcgtgccactgcactgcacctaaggaggagagagctgaagttgcttccattcccatcttttccctgcagctctagttcagctcctaacacttgttcacagcaaagtcatctcctgttagtttcatctgcaggacctagagaacaaacattacttccggctgattcccgttcttctctccctcatggcatcactgataacggtacaagaaaggaaggaaggaggaggaggagggggagaaagaggaaggagacagcaaaagatgaaggggagtgtgttccatctgcggaggaagtgtccattagggtaaatactctttatgagagtggcgaccccattgggaagaaggagttgggccggtgcgtggtacaatggctaaagcagggtatgcactcaatggctataaaatatgcttccacagaaatgcagaacgatggagcaacattcttactggatggtggatcatctgaagacaacctcggatttgtgatgcttgcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaaggcctctactcactatcctaccctctttgaccactttcaaagggaactccgtgatgttctgttgaaacaacagaaccagggtcttatttctgattggcgcaccactcaatcttggatgcttctgaaagaattggctaactcagctcagcatcgagcagctgcccgcaaacctaaagctcctactacgcacagtactcttggcataagtcttgataagacaaggttgatgcagaccaaaattgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctggagtttacacaagaagaactgaatgccacccctgtgatggatgggaactcaaagaagccactcaaaccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgcaatttgaatgttatcagcagttcaactgggttggatggccagcatctggtcctatttagagtgaaagataaccatagattgcctccaaccacactctctcctggggatatggtttgtatcaggacatgtgataaccggggggaaattaccacatcttgcatgcaaggctttatatataatcttggtgaggatggttgcagcattaccgtgacactgaaatcccgccgtggtgatcctacgttctccaagctttttgggaaaaatgtgcggattgacaggattcaggcattggctgacgcacttacatatgagcgaaattgtgaagcactgatgcttcttcaaaggaaaggtttacagaaaaagaattcttccattggagtagtagccactctgtttggggacaaggaagacatgatgatgatggagcagaataatctggctgattggggagaatcaacaatacatgatgatgagctattgaaaaagaacaaatatgactttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtcctaataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgtgctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataacatggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctaggatatctccatctgttgcttcaaggtccttgggagagcttgtgaacagaagacttcagaagttcacagaagagttcgagaggaaaaaatccgacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgtcaactgttgaagcagcttgggaagaactttaaaaagaaggaaaaggaaataatcagagaggtcctttcaaatgctgatgttgtcctatcaactaatattggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaagcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcattcttgctggtgatcaacggcagcttgcacctgttgttttatcaagagaggctatgcaaggtggactagcaatgtctttactcgaaagagcttcatcgttgcataatgaactactgacaacgaaattaacaacacaatacagaatgcatgattcaattgccagttgggcatctaacgagatgtatgatggttttctcaaatcctccccatccgttgcttctcatcttcttgctgattacccatttatcaaggaaacttggataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaagtttgaatattgactgtgaggagcatttagaccctgctggtacaggatctttttataacaatggcgaggcagatgtagtttcacagcatgttttgaaccttgtacaatgtggtgtctctccaaccgcgattgccgtccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattatccagaggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagatgccgtggtcatatcaatggttcgttcaaacactttgggagctgtaggattccttggcgacaacaggcgcatgaatgtggccatcacaagggcacgccgtcatgtcgcacttgtctgtgatagttctacaatctgcaacaatgcttttctggctaggctccttcgccatatccgtcagcacggccaggttagacatgttgaacctggttcctttggcggggattctggtcttggctacactccacctgccttgccctcaatcagttag</cdnaseq> |
| Protein Sequence |
<aaseq>MAIKLTKYQFFSSRATALHLRRRELKLLPFPSFPCSSSSAPNTC SQQSHLLLVSSAGPREQTLLPADSRSSLPHGITDNGTRKEGRRRRRGRKRKETAKDEG ECVPSAEEVSIRVNTLYESGDPIGKKELGRCVVQWLKQGMHSMAIKYASTEMQNDGAT FLLDGGSSEDNLGFVMLAQPYLSAIPMPKGQEALCLKASTHYPTLFDHFQRELRDVLL KQQNQGLISDWRTTQSWMLLKELANSAQHRAAARKPKAPTTHSTLGISLDKTRLMQTK IEDFVKKMSDLLHIERDAELEFTQEELNATPVMDGNSKKPLKPVEYLVTHGQSQQEQC DTICNLNVISSSTGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEITTSCM QGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNCEALML LQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDFDAS QLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMV EKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCI QDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDL VIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSL HNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCA FLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQ SPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFLGDN RRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQVRHVEPGSFGGDSGLGY TPPALPSIS</aaseq> |
| Gene Sequence |
<dnaseqindica>5555..5803#5215..5372#4887..5055#2867..3910#1631..1914#373..1388#186..211#aattggtgggttagaactgaactgtgaggagcttcagagactatggagcaaggtgtagctggagaaaacgtgtacaacacagagagactgcacagctacggaagtggtaaacaccagtgctagtatatgtatggattgaaggtaacgtagcatttgccttcaccacaactctgcaagtcaccagcatggctatcaagcttacaaaatatcagtgagaaatcctgagtcctaagctcatatgcccatgtagctgtatctgtcaatattttccttttaagttcacttactggtagtgatttcttctcgtcttcctctcgcctccatatctagctttcctgggctgagcatgtcttctcatgttctgtctttcaggttcttttcttctcgtgccactgcactgcacctaaggaggagagagctgaagttgcttccattcccatcttttccctgcagctctagttcagctcctaacacttgttcacagcaaagtcatctcctgttagtttcatctgcaggacctagagaacaaacattacttccggctgattcccgttcttctctccctcatggcatcactgataacggtacaagaaaggaaggaaggaggaggaggagggggagaaagaggaaggagacagcaaaagatgaaggggagtgtgttccatctgcggaggaagtgtccattagggtaaatactctttatgagagtggcgaccccattgggaagaaggagttgggccggtgcgtggtacaatggctaaagcagggtatgcactcaatggctataaaatatgcttccacagaaatgcagaacgatggagcaacattcttactggatggtggatcatctgaagacaacctcggatttgtgatgcttgcacagccttatctatcagcaattcccatgcccaagggacaggaggcgctctgcctcaaggcctctactcactatcctaccctctttgaccactttcaaagggaactccgtgatgttctgttgaaacaacagaaccagggtcttatttctgattggcgcaccactcaatcttggatgcttctgaaagaattggctaactcagctcagcatcgagcagctgcccgcaaacctaaagctcctactacgcacagtactcttggcataagtcttgataagacaaggttgatgcagaccaaaattgaagactttgtcaagaaaatgtcagaccttctacatatagaacgagatgcggagctggagtttacacaagaagaactgaatgccacccctgtgatggatgggaactcaaagaagccactcaaaccagtagagtacttagtcactcatgggcagtcacagcaagagcagtgcgataccatttgcaatttgaatgttatcagcagttcaactggtcagtgcattatactctttttatattgttcgttggttagtaattctaaatatgtgctgccaggatagtgatttttatctgcttctttttggttagtaccgtagtaagatatggctgcttatatttatgcatgcaaatatgcatatgcagataagactaacttgaggtttgatactcgattttgctatacgaactaaagtttctcctatttattactttgttttaaatcttgttttgtgcagggttggatggccagcatctggtcctatttagagtgaaagataaccatagattgcctccaaccacactctctcctggggatatggtttgtatcaggacatgtgataaccggggggaaattaccacatcttgcatgcaaggctttatatataatcttggtgaggatggttgcagcattaccgtgacactgaaatcccgccgtggtgatcctacgttctccaagctttttgggaaaaatgtgcggattgacaggattcaggcattggctgacgcacttacatatgaggtaatgcaatttagttgatgtaacccctagtcccatgcatcccttcctttagatgcatgagatgggtgttagcattctgagccatgtcacagaagtatcagtctgtttggacctaaaaggctaaaagtaatttcttccccatacaataccatttaattgttagtaatcttttttcaagaggtaatgcaatttaggcacctaggcacctagcctaacaaaaccatttaattgttaatacttgatactatgcaacattaccctttcgaaaatttgagccatatgtatgcaacatatcatatacatatgtatatatcatatgtatatgatatgcaacctaggtacctaacttacatgtttataaaaggagtggtaaggattcttaaagttccgaactttctgcatatgataaatcaaacctaaatatgttatgtaggaatgctaggtatgaagacaattgagatgtaaaaataaattagtttattactgatcttgctgttttaaaaattaaaatcagtatccccaaaagtaagtggttaccgctgtgtctgaattaaattttgtttgtgtcaatccagtatttattttcttgtgcgagtgtcatgctaacgttggtgtggtataatgaattttgttacaaatgattgtctattagcaattggggctaggtctagtttctgagtagaaaactatggattttttaatttaatttgaaatttgcataatctgatgaaactaaacactggcttctaacataaatatttgcatggaagaagtgatcaggacaggacttttttgttgaaaactggactggctaatgttaggtgttctgtgatcacagattatttcattctttcctacaaggttgaaaatatgttgattttgtttcaagttttactaaaaggatgaacaaagcttgaacgtttagcctattggtttgtgtatgatttggcagcgaaattgtgaagcactgatgcttcttcaaaggaaaggtttacagaaaaagaattcttccattggagtagtagccactctgtttggggacaaggaagacatgatgatgatggagcagaataatctggctgattggggagaatcaacaatacatgatgatgagctattgaaaaagaacaaatatgactttgatgcctcccagttaaaagctatcacactaggcttgaacaacaaaaggcctgtcctaataatccaaggacctcctggcacgggcaagactggtttgcttagttatctcattgcatgtgctgtccgaaagggtgaacgcgttctcgtaactgctccaagcaatgcagcagttgataacatggtggagaagttgtcagatactggactggacacagtacgagttggaaatcctgctaggatatctccatctgttgcttcaaggtccttgggagagcttgtgaacagaagacttcagaagttcacagaagagttcgagaggaaaaaatccgacttgagaaaggacttgaagcattgcatacaggatgatacattagccgcaggtatacgtcaactgttgaagcagcttgggaagaactttaaaaagaaggaaaaggaaataatcagagaggtcctttcaaatgctgatgttgtcctatcaactaatattggggcagctgacccacttgtgaggaggattggttgctttgacttagtaattattgatgaagcaggacaagcaatcgaaccctcatgctggatccctatcttacaaggaaaaagatgcattcttgctggtgatcaacggcagcttgcacctgttgttttatcaagagaggctatgcaaggtggactagcaatgtctttactcgaaagagcttcatcgttgcataatgaactactgacaacgaaattaacaacacaatacagaatgcatgattcaattgccagttgggcatctaacgagatgtatgatggttttctcaaatcctccccatccgttgcttctcatcttcttgctgattacccatttatcaaggtactgatgctctctgttcctgtttccataaacctatcagaattttgcagggggtagtttttctcatgccagttgccgaaaagcatgaagatgaaatgcccttttattttcaatgccttttgagttttaatattagtttcttagggatttcatttttttattctacataaaatgtatctggtcttgttgatagtttaaattggggtttggttccatttttacataatttttcatgttgatttcatgcctaaatgaacatggtttgtgtgatgcccttgttcatgagcatacttcaattttattttcatgaaccacaattaagtttgcatgaagatgaagggtataaattgtatggagattttctgttgctatatgacttaaagtgtaggcaatactaagacttcctccgttttgaattcaacataatgtgaactgctttcaatataattggagcttaatccccttttgtgtaaataagtcttgccaaatggaagctaagagatgatatatgagacatatgttgattacaattttgcatggctgtaactacgaaatgttctaggtcataataattatactaaaatggatgttggtcatggcttgctttataacggagtctctcaaatgttgtttcctctctggatctacgtatacatatgtgttgtttgtaggaataatttggtacaggaacacaacctctatgaatgtatatgcagaggctgatttatttgatgcaaatcatgtatgcagttttttgtattcagggatgattattttggcatttttaaccttataacttaagttttatgtatttgagatccattgcaataggtaggtacaaatgcatctattaaaggtgtggaggtccgaattgttatccagaaacaattgcatttgttttaaaagattgattatattttatggttgattaatgtatgcatcatattgataatggattaaaattaccgtctttcaggaaacttggataactcggtgtgcctttcttttacttgacactcgtatgccgtacggaagtttgaatattgactgtgaggagcatttagaccctgctggtacaggatctttttataacaatggcgaggcagatgtagtttcacagcatgttttgaaccttgtacaatgtggtatgtgcctgttttcctttaattaattacaccacacttagattttgtgttcaacttgcagcacactttgtatcctaattttttatttgcccgtagttgttttattcctaatgctgcacagattattgatgaatggactgctgaaaacaatttgtgcaggtgtctctccaaccgcgattgccgtccagtcaccttacattgcgcaagtacaactattaagagacaggctagaagattatccagaggcttctggtgttgaggtttcaactatagatagcttccaagggagggaggcagatgccgtggtcatatcaatggtacacacttcctttgctgtctttatagggtagtccttcttggtttgctgtaaggtgaccgtggtacttcaaatgccgtgttgaaccatataatctcatgtcaataaaagttgcaggtcattcttaacccaactttaatacttctatgaaggctctaagatatttctattcaatcctgttaggttcgttcaaacactttgggagctgtaggattccttggcgacaacaggcgcatgaatgtggccatcacaagggcacgccgtcatgtcgcacttgtctgtgatagttctacaatctgcaacaatgcttttctggctaggctccttcgccatatccgtcagcacggccaggttagacatgttgaacctggttcctttggcggggattctggtcttggctacactccacctgccttgccctcaatcagttagtttttcgattgcaacttgtcggtgttgtttctgcgtgtatatataaccacgatttctactgctaaaattgagaggtcgatctatcatggccctaaatatgagtctggcagatgggaaaatataacgtcaattgattggcagacttgcattgatgatctaaccaggttgtcaaccatgcattttcaatcccgaaacaaaaacatcagtttcgtgtcctgtaatatgctgctgcttgttgctggatgatgggttccttgtgaatgtgaatgtttgtaatttgtatattccgctacagagatgtacagcagcttgaaatcccacgattgttt</dnaseqindica> 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