Os05g0467000

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0467000| Description = Similar to Calcium-dependent protein kinase| Version = NM_001062325.1 GI:115464380 GeneID:4339053| Length = 5086 bp|...")
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Gene Name

Os05g0467000

Description

Similar to Calcium-dependent protein kinase

Version

NM_001062325.1 GI:115464380 GeneID:4339053

Length

5086 bp

Definition

Oryza sativa Japonica Group Os05g0467000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22965147..22970232

Sequence Coding Region

22965459..22965608,22965694..22965924,22966464..22966631,22966716..22966831,22967539..22967691
,22967775..22967918,22969377..22970058

Expression

GEO Profiles:Os05g0467000

Genome Context

<gbrowseImage1> name=NC_008398:22965147..22970232 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22965147..22970232 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtaactgctgccggtcgccggcggccgccgcgagggaggatgtgaagacatcgcacttccccgcctctaccggaggcgggaagaagaagccgcaccaggcgcggaacgggggaggcggaggtggtggtggaggagggggaggctgggagaagaagcggctgtcggtgctcggggaggaagggagcgaggtgaacggcgggatcgaggagaagtacgcgctggacagggagctggggcgcggcgagttcggggtgacgtacctgtgcatggaccggtgctcgcgggagctcctcgcgtgcaagtcgatctcgaagcggaagctgcggacgcccgtggacgtggaggacgtgcggcgggaggtggccatcatgcggcacctgcccaggagcgccagcatcgtgtcgctgcgggaggcgtgcgaggacgacggcgccgtgcacctcgtcatggagctgtgcgagggaggggagctgttcgaccgcatcgtcgccaggggccactacacggagcgcgcggcggcggcggtcacgcgcaccatcgtcgaggtcgtgcagctctgccaccgccacggcgtgatccaccgggacctcaagcccgagaacttcctcttcgccaacaagaaggagaattccccactcaaggccatcgacttcggcctctccatcttcttcaagcctggtgaaaaattttctgaaattgtgggaagtccatattacatggctcctgaagtgctgaagagaaactatggacctgaaatagacatatggagtgctggtgtcatcttgtatattttgttatgtggagttcctcctttttgggctgagactgaacaaggagtggcacaagctatacttcgtggaaatatagattttaagcgagaaccatggcccaatgtttctgataatgctaaagatctagttcgtcagatgcttcagcctgacccaaaactcaggctaacagcaaagcaagttcttgagcatacctggcttcaaaatgctaagaaagctccaaatgttccacttggagatattgtaaagtcaaggctgaaacagttttcaaggatgaatagattcaaaagaagagctctaagggttattgctgatcacttatcagccgaagaggttgaggacataaaggacatgttcaaggtgatggatacagataatgatggtatagtctcttatgaagagttaaagagtggaatcgcaaaatttggttcccatcttgcagaatctgaagtgcaaatgcttattgaagctgtggatacaaatggtaggggagcactagattatggtgaatttttggccgtttcacttcacttacaaaggatggcaaatggcgagcacctccggcgggccttcctatttttcgacaaggatggcaatggctatattgagcccgaggagcttcaggaggctctggtggaggatggggcaactgatatcatggaagtggtgaaggacatattgcaagaggttgacactgacaaggatggcaaaattagctatgaagaattcgtagcaatgatgaagactggcacagattggagaaaggcgtcacggcattattcaagaggacgtttcaacagccttagcataaggcttataaaggatggatctgtaaaattgggcaacgagtga</cdnaseq>

Protein Sequence

<aaseq>MGNCCRSPAAAAREDVKTSHFPASTGGGKKKPHQARNGGGGGGG GGGGGWEKKRLSVLGEEGSEVNGGIEEKYALDRELGRGEFGVTYLCMDRCSRELLACK SISKRKLRTPVDVEDVRREVAIMRHLPRSASIVSLREACEDDGAVHLVMELCEGGELF DRIVARGHYTERAAAAVTRTIVEVVQLCHRHGVIHRDLKPENFLFANKKENSPLKAID FGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAE TEQGVAQAILRGNIDFKREPWPNVSDNAKDLVRQMLQPDPKLRLTAKQVLEHTWLQNA KKAPNVPLGDIVKSRLKQFSRMNRFKRRALRVIADHLSAEEVEDIKDMFKVMDTDNDG IVSYEELKSGIAKFGSHLAESEVQMLIEAVDTNGRGALDYGEFLAVSLHLQRMANGEH LRRAFLFFDKDGNGYIEPEELQEALVEDGATDIMEVVKDILQEVDTDKDGKISYEEFV AMMKTGTDWRKASRHYSRGRFNSLSIRLIKDGSVKLGNE</aaseq>

Gene Sequence

<dnaseqindica>4625..4774#4309..4539#3602..3769#3402..3517#2542..2694#2315..2458#175..856#agcctctgctctgctctgctctactacagccacctctctctctctctagtttctctctctagccccctccctcctcctcctcctcccccactagcgcagagcccaatgcggaacaaaccctagtagtgcccccccccccaccaccgggtcccctcctgatctcgcgcggcggccatgggtaactgctgccggtcgccggcggccgccgcgagggaggatgtgaagacatcgcacttccccgcctctaccggaggcgggaagaagaagccgcaccaggcgcggaacgggggaggcggaggtggtggtggaggagggggaggctgggagaagaagcggctgtcggtgctcggggaggaagggagcgaggtgaacggcgggatcgaggagaagtacgcgctggacagggagctggggcgcggcgagttcggggtgacgtacctgtgcatggaccggtgctcgcgggagctcctcgcgtgcaagtcgatctcgaagcggaagctgcggacgcccgtggacgtggaggacgtgcggcgggaggtggccatcatgcggcacctgcccaggagcgccagcatcgtgtcgctgcgggaggcgtgcgaggacgacggcgccgtgcacctcgtcatggagctgtgcgagggaggggagctgttcgaccgcatcgtcgccaggggccactacacggagcgcgcggcggcggcggtcacgcgcaccatcgtcgaggtcgtgcagctctgccaccgccacggcgtgatccaccgggacctcaagcccgagaacttcctcttcgccaacaagaaggagaattccccactcaaggccatcgacttcggcctctccatcttcttcaagcctggtgagctccccggcactgagatccatccgcgattcggacaatcggacgaactgttttttttttcgcgcttttggattttttgggggagttttcgcaggattggtgggttggcagccggttgggtggaattctctgtactctgtagtagtgtagtggccgttgctgtagctgattgctagtatgttcttgcttgcgtaatctgacgagaacttgttctcttttggtaggacttctaacttttggaacaaacatatacgcactgcagagtgagctctgagttcagatactggaatcttaagaactaggttgagtcgttgagtggttgctgtttttggaatttgggaaactaccggtgggagcagacgtgacagttgctatttccaaatatagtgtcctggtgctgcccttataccaagtcttgcgtgctgattcctcattccacttcagtttagttgttttgggtaataagattcaggctttcaacacaacaattgtagcaactcttcttataattctatttttatcaactaattaatttggcaccaatgatcttggttgttaatgtacacataacaatatacacttgtcgaaccaggacactaagaatatgctgtaagagacttgaagcagtgctttacaattcttttttatgcttgtttatgcacttttctcaataggtagtattcttctatttcaattccattccccttgtcctctggttgaattctagtaaatagttaactacttggacaacaaatttccagtggctctatgtttgcttctatgcaatctcagattgttgcagaatgtttcacattgtaacagcctgaatcttatagagttctgttatgacaatcatcatcactcttatatcatgtggcattcatgcaattaatttgttcacctcatatccatttccatactggtcctgcttattggtagggggaaaacatattttcgccaggtagataagttccttaaaaataagtggctactggaattttacattaaaacatggaacaactgaacaatgtaaattctggagctacaaaacttgccatagctaaaccttgatgcatttcacagtttttgccaaaaaaagtagtcttcaaaatttgtgttgatttgtttgctgttgattactggagtcataaatgctttaatgtggcatcaacattgggaaaatatcgatcaagcctttttcagaagcactctcgttttcttctcataggattctgttggattagtaatgcctctatatgatatgatcgcctataggtgtggaattattcttattttgatacatattatagaatgaatcattgcattgtttggattttgtttaatgaccaactgttttttgtaagacacctcttcacatttccctgtgaaatgcctgtatgctatatatttaaatatataaaatgtttaatctgatccactatcttgattgttcaggtgaaaaattttctgaaattgtgggaagtccatattacatggctcctgaagtgctgaagagaaactatggacctgaaatagacatatggagtgctggtgtcatcttgtatattttgttatgtggagttcctcctttttgggctggtaccaactttgccttctctttgtgaaaaccttaaatcatttagctttgctcttctgcaaattcttaccaagcaaaattgcagagactgaacaaggagtggcacaagctatacttcgtggaaatatagattttaagcgagaaccatggcccaatgtttctgataatgctaaagatctagttcgtcagatgcttcagcctgacccaaaactcaggctaacagcaaagcaagttcttggtaagtggcacatagtgcttttaaagctggcacattgttaactaagcatgacttgtacttccttttggctatgtgatgcattgattgcactagtaattgttacaaatagttgatgatctagctatgctttattgcattttcctaatgtgatttggaaatcaacagtaagaaactggctgttgatgaatgtcgagaatagtatgagatgtttaattgttgctataaattcaaggtaaatttgagacttggatgaaccatagttcatactggcaagtgccagatggaaacaacttagaagatatgtaagtttgagcaaaagaggtaaaaaaaaagaagcatagttattaccaaagccatggacaacaactgatgcaattttaattatatcttatattgccttctaaacttattgagttgaagcatgccaaatggtgtagtgaattagacaggtttgttttattttgcttcttcatggttatgcgttattttgtacaatcatgggatgcttatcaaactatgaatcatttgcgtcaaaaaaaaaaaactatgaatcatcaaaggaattcgtcgtgttgtccacatgctgaataatgtagacaattaagcaatcatgttttaccacgtatttccttttttctttgatcagactcagacagtgatatacaggcttggtactcaagatagctgtttcacttctgttgtcgcagagcatacctggcttcaaaatgctaagaaagctccaaatgttccacttggagatattgtaaagtcaaggctgaaacagttttcaaggatgaatagattcaaaagaagagctctaagggtttgaatccttctctaattgattatctttttctaagtctaacaaacatatatattttactgaaccgaactgattcttgaccaggttattgctgatcacttatcagccgaagaggttgaggacataaaggacatgttcaaggtgatggatacagataatgatggtatagtctcttatgaagagttaaagagtggaatcgcaaaatttggttcccatcttgcagaatctgaagtgcaaatgcttattgaagctgtaagtaacctggaagtatttcacttgcttgttggagttcaataaaattgagttacaaaagatagttcaatcagattaaatgttcaccatctttggtgatagctgatactgtgtcacatgtttttttttctaagtctgatgtctggtgcaatgtaaaagtgttccttttacaccacatggtggaaacactggccaattttccctttattgcccttttctttttgcaataatggatcaagggcataatcaaactgttacttccatttgtacaattgacctgcctgttcttctcattagtcttgacatgtttatatatttcacggagcgtgctgagacatttactattaacattccttttttgttttgtcattttggtgtctttttggtccatagtatgcaatttgggagtcagacttgaatacatgataattaggtggtctcaatggtttgattagtgtaaatgtgtaatgcccttgagtattaataaaacaaaaagataggtgatttgcatatctgatatttttgtggttggaaaataggtggatacaaatggtaggggagcactagattatggtgaatttttggccgtttcacttcacttacaaaggatggcaaatggcgagcacctccggcgggccttcctatttttcgacaaggatggcaatggctatattgagcccgaggagcttcaggaggctctggtggaggatggggcaactgatatcatggaagtggtgaaggacatattgcaagaggttgacactgacaaggtgatgattcactaatgctggtagcaatgatataacctccagatcttatgcctttacttaacaaacatttcgatcgtttattcaggatggcaaaattagctatgaagaattcgtagcaatgatgaagactggcacagattggagaaaggcgtcacggcattattcaagaggacgtttcaacagccttagcataaggcttataaaggatggatctgtaaaattgggcaacgagtgaagttgcaaacttgcagctggtgttgccctttactactcatctgcgcatgtaagtctggcccttggacccactaagcagagaccttctccttttctaatgattattttggtggtaatttagataggcagagccccccccccccccctgattggcttactcatgtaagtagttttcctggtatctctgatgaggagcacgcactgaatgctgcaccaatagctgtgcacagtgcacttgcttgatatctccttcactgtacccatgcttgttgtacaatattttgttgttccactcaatgcacttcgttgatct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0467000, RefSeq:Os05g0467000