Os09g0249900

From RiceWiki
Revision as of 20:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0249900

Description

Similar to Ferredoxin-thioredoxin reductase (Fragment)

Version

NM_001069210.1 GI:115478159 GeneID:4346508

Length

4013 bp

Definition

Oryza sativa Japonica Group Os09g0249900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4357991..4362003

Sequence Coding Region

4357991..4358151,4358531..4358637,4358718..4358845,4360932..4360981,4361083..4361154
,4361569..4361626,4361759..4361806

Expression

GEO Profiles:Os09g0249900

Genome Context

<gbrowseImage1> name=NC_008402:4357991..4362003 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4357991..4362003 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attccccatcctcctctctctctctctctctcgctccctccctcccgcgcgtgccgccgccgccgccgccgccaccgcccgcccccctcgtccgccgcgcgcgcgtgccgacgaggagttctcctcactccctctcagcccctcccaatccgagaagcaggatcggtgggctgctgtccagcaatgatgtcgatggcctccaccaccgccagccccttttgcccttcacccatgcccagaggacgcaaatgcacagttcgagttcaagctggagctgccggagcggatgcatctgataagtcgctcgagattatgcgcaaattctctgagcagtacgcccgccgctccaacaccttcttctgttccgagaagtccgtcaccgccgttgttatcaagggacttgctgatcacaaggatcaacttggagctcctctatgcccttgtaggcattatgatgacaaagctgctgaggtagcacaaggattttggaactgcccttgtgttcccatgcgtgagaggaaggaatgccattgcatgctttttcttacccccgacaatgactttgctggacaagaccaggctataaccttggaggagatcaaagacgcaacatcaaagatataa</cdnaseq>

Protein Sequence

<aaseq>IPHPPLSLSLSLPPSRACRRRRRRHRPPPSSAARACRRGVLLTP SQPLPIREAGSVGCCPAMMSMASTTASPFCPSPMPRGRKCTVRVQAGAAGADASDKSL EIMRKFSEQYARRSNTFFCSEKSVTAVVIKGLADHKDQLGAPLCPCRHYDDKAAEVAQ GFWNCPCVPMRERKECHCMLFLTPDNDFAGQDQAITLEEIKDATSKI</aaseq>

Gene Sequence

<dnaseqindica>1..161#541..647#728..855#2942..2991#3093..3164#3579..3636#3769..3816#attccccatcctcctctctctctctctctctcgctccctccctcccgcgcgtgccgccgccgccgccgccgccaccgcccgcccccctcgtccgccgcgcgcgcgtgccgacgaggagttctcctcactccctctcagcccctcccaatccgagaagcagggtatgtatgcacatgtgctctcctcttcctccctatgtttttttctcgatctatttctgtcggggggtttgatttagttagggatggcgctccatcgtacctgcttgctagttgctatcgtgttgggaggtgaggtgatgttatcgtgttggtcatcgtcagcgctgcgcctccccaagtttttaatttaggttcccttttgaagaggtgttgaggatcattacatctaaacataccattagtataattacatcgcaacccagtagtattagaaagggtatgtataacccacataatttttgcaactacaagatgtttcttaagagtgatcaatgagcaacattagttttttacaacatacacctttgtcatctcgcagatcggtgggctgctgtccagcaatgatgtcgatggcctccaccaccgccagccccttttgcccttcacccatgcccagaggacgcaaatgcacagttcgagttcaaggtatccgtctactcaatctatgcagtactctgtaatctgatcgatttctgatttcttttgcttaatttgggggtacacagctggagctgccggagcggatgcatctgataagtcgctcgagattatgcgcaaattctctgagcagtacgcccgccgctccaacaccttcttctgttccgagaagtccgtcaccgccgttgttatcaaggtaatggaaccaaatctattttctacttctctcttgaatcctcgttaaactttacttttaaaaaaatctcactgcgtgcacatacaaatcaaatactagcaaaaatcatcttagccacaaacaaattcttctatgctgctatttcatgtgttctgtacctgcagcttgataagaagattattacgccctattgctgctgttgaaagttgatgcagtaggcttcaatcttaggtagaagagaacctgccagtatgcccctgattttccattggttagcaaggccttccatacacctcattggttcaacacgctaagttaacacacagttttaagtatcctaggttgcattgatgtagaaggtgagtgctgcgtactgcctgagattttcagagcacaaaaggaactttgaatgcaacatgtatttctttcccagtgctgtttgggatatgaaacaactagagcagaaacagtgaagcatgccagctgaatgctgattactgaactaaaatgtatatgaagagtgtattcacagcaatctcttcatgaaaaaaaatagaaaacccaagtccaacataataaaaggcatatatttgagccccatcctctagataatcaatcatattactgcattgtctaagtgcccaaatctcaaaatagtttaccattcccaggtaaagtttgacagcatctccctgttaaattacattgctagaatagagacataaataatagcaaatggtatttcctctgataactgccaaaggagaagaaatcaacaattgcccaaacatgagtaagaaaagagtactccaattgatagtccgaaatcgtggatctcaagcagcgaggaataattacctcagatggtgacaaatccgtgagtagaaaacagatcaaggcgattgctatgatacaaggtctatatacgaatagatgatatggttggttgagttgttggaggtgggtatacatgcattttaaatcatggataatctttttgttggttgcatagtggatctctttatgccttttgagttgacagttcgtattgtaggatcatatgtaactcaaaaatcgtgttttaacttttctgcatagtatttgggctattggatgattaaggtcatacctgggatctgttctggtgggatcctatgagtattactagaatgagttttatgaccatgtagtttttgtctagactaggagtcctcatgtacctgttacttttgatttgcctacaatctcaatggagtatttaagtcatattttgctaagatgtatcaaggttaaacaaaaaggaaatttgttctcacattagagcttttcttctaatctcatacagctagcatcgagaaaacaatattacattgatttattgcctcatgtgcctactctgtggactgagaccttgatattcttgaactgttgttatccgttggtacataatttcttttcgctttcattgcagtgactgatttggtacattgcggacactgagtcactaacaagactaagtagttgtgtgttgaccatggaaatcatacctgtaacttggtcaaagacacagccgatcatcagacagtgtttgggtatgggcgagaaggtcaaaaaagttatgagtgttatgtaggattttcttgtcagtgacactccaaggggttagtaaactggtgaatgcttagagggcatgattaagctcttgcattgtggccatagtgtcaattgaggggaacaaatgatccatcaatgttgtaaaccagcaagccaatgtataaaggacatggtaaatgagcgcaaatgataataaaagggaatcacaatctaccactattcacaatccctttagctaactcttggaaccactggggccattccttgataccaactgataaaactccatcagcttgacaatcagctcctctactctggtttaatcacaggagagaagtcatcttgtttttattttaatataaactgtggactgttgtcattgttccagccctttcttggtaaaaagtataaaattaaggattgccttctgtgtcttcttgattctgaatagcaactaaaaatatttttgcagggacttgctgatcacaaggatcaacttggagctcctctatgcccttgtaggtaatttatcttacgtgctgtgtccactctctaattcttcttcgggttgattacgacagttacttactgttcctgcttttcacggtgtaaatttaaatcaggcattatgatgacaaagctgctgaggtagcacaaggattttggaactgcccttgtgttcccatgcgtgagaggtccagttctttataactcttgttttaacaactatgatagtgcataaataatgttgtgatgctatttgtggtttagttataggcgcggaacatggtgaggtttcactgtttctttgttccgatttcatagtatttgtggaggcatatgcatttctaagagagcacaaacgaatctgctgtagattattgctgattgcccaaagtgagaagcatagatgttttgataaagacgttcctcagtaatatcatcatgacttttgaaaccatgtgtcctacatatataccgatgacttaggaacatagtctcttctggcccttatttttttgttataatggacatagatataaatgaaataatgaatatgatgagctgttggacccatctgttttcaattggttgatcaacttttgcaggaaggaatgccattgcatgctttttcttacccccgacaatgactttgctggacaagaccaggcatgctcctttttcacaatgttttcttcacagataccatctagctctccgttgtcattgcatgaacgtcatttctacaaattcctcaaagtaattttatttttccttatatatactctatgcatattgcaggctataaccttggaggagatcaaagacgcaacatcaaagatataacctcagtgcaccttttcttccattattctgcttgacaccagagtttgtatatgtagtctctgtaagatgacattctaccgatgaaatcggtcatgataagatgtgtagtaaacaacaatttgtcgttccttagctttcatgttcttgcttttgaacatgggaaaacacgctcccactaatacaacagcctattaact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0249900, RefSeq:Os09g0249900