Os09g0255266

From RiceWiki
Revision as of 20:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0255266

Description

Glycoside hydrolase, family 32 protein

Version

NM_001188807.1 GI:297726744 GeneID:9268563

Length

7742 bp

Definition

Oryza sativa Japonica Group Os09g0255266, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4756598..4764339

Sequence Coding Region

4756598..4756757,4756916..4756924,4762970..4763724,4763841..4764020,4764091..4764339

Expression

GEO Profiles:Os09g0255266

Genome Context

<gbrowseImage1> name=NC_008402:4756598..4764339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4756598..4764339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagattaggtcttgccgtgtgcgccgtctccttccacctctgccttcttctgtcgtcgacctcctcgctccggctaaaccccacgacggaggacacagccaaccatggcagaagaactgcttatcacttccagcctgcaaagaactggcagaatgatccgaatgggcctttgtaccataacggtatgtaccatttgttctacaagtacaacccgcatagcgcgctctgggacatcggcaacctctcctggggccactttgtctccggcgacctcctcaactgggccgctctcgacaccgcgctcgaccccacctcgccttttgacgccaatggctgctggtcgggctccgccaccatcctccccggcggcctcccggccatcctctacaccggcattgacgccggcaaggagcaggtgcagaacgtcgccttcgccaagaacccctccgatccgctcctccgtgagtgggagaagcccgcgtacaatccggtcatcgcgctcccgcccgacgtccccggcgacaacttccgcgacccctcgacggcgtggctcgggcgcgatggcctgtggcggatcgccgtctccgccgaggtggacggcgtggcgtccacgctcgtctacaggagcgaggacttcgtccggtgggagcggaacgccgcgccgctgcacgcgtcgcgcgccgccggcatggtggagtgcccggacatgttccccgtggcggagaacggcgaggatggcctcgacacgtcgacgaacggcgccggcggcgtgcgccacgtcctgaagctgagcgtgatggacacgctccaggactactacatggtcggcacgtacgacgacgcggcggacgccttctcgccggcggagcccgagcgcggcgacgactgccggagatggcggcggctggactacggccacacgttcccgaggaagatgtggatcgccaaggacggcaagcagctgctgcagtggccaatcgaggagatcgagacgctgaggaggaagcgcgccgccggtctccggcgaggcaccaggctaggcgccggcgcggtgcaggagatcgtcggcgtggcgagctcgcaggcggacgtggaggtgattgaccattcggtggtggagagcttcggcggcggcgggcgggcgtgcatcacggcgcgggtttacccggagcacgtggcgacgagcagcagccatttgtacgtgttcaacaacgggagcgacgacgttaaggtggccaagctggaggcgtgggacctggcgacggcgaccgtcaacgttgttgttggagaccaccacggccttgctgcgccggcgttggagttggagccgacacgtacgacgcagtga</cdnaseq>

Protein Sequence

<aaseq>MARLGLAVCAVSFHLCLLLSSTSSLRLNPTTEDTANHGRRTAYH FQPAKNWQNDPNGPLYHNGMYHLFYKYNPHSALWDIGNLSWGHFVSGDLLNWAALDTA LDPTSPFDANGCWSGSATILPGGLPAILYTGIDAGKEQVQNVAFAKNPSDPLLREWEK PAYNPVIALPPDVPGDNFRDPSTAWLGRDGLWRIAVSAEVDGVASTLVYRSEDFVRWE RNAAPLHASRAAGMVECPDMFPVAENGEDGLDTSTNGAGGVRHVLKLSVMDTLQDYYM VGTYDDAADAFSPAEPERGDDCRRWRRLDYGHTFPRKMWIAKDGKQLLQWPIEEIETL RRKRAAGLRRGTRLGAGAVQEIVGVASSQADVEVIDHSVVESFGGGGRACITARVYPE HVATSSSHLYVFNNGSDDVKVAKLEAWDLATATVNVVVGDHHGLAAPALELEPTRTTQ </aaseq>

Gene Sequence

<dnaseqindica>1..160#319..327#6373..7127#7244..7423#7494..7742#atggcgagattaggtcttgccgtgtgcgccgtctccttccacctctgccttcttctgtcgtcgacctcctcgctccggctaaaccccacgacggaggacacagccaaccatggcagaagaactgcttatcacttccagcctgcaaagaactggcagaatggtaatcaaggactaatctttttgattaatcgcttgatccagttacggattcctgctgattagccaaactaatcccttttcctgtctgatcggtgccgaattcctgctgatttggatgcattggatttacgatggccgctgctgatgccgatcgagcagatccgaatggtacgctctctgcaattctgcatctcttcttgttcccctcccttctctgattacttgtagtctctgcttaattcttctgtaaaagaattgcataaattacatgctttcttggttacggatctccagtagtgaacactcaacattgaattgcaaaaactgtaaaagatgatccttatgagcttatcctgttaagcatatagcattgtatctctcgtatatagcatgctattgtatatttcctttggccgttccttcctaatccctcccgggtgtgtttctataaaccggtagagctggatatggaaggttctgcgcctacttgtactccgtgctatgcatcaatggaatacacgttgagtctatcaatccaccatggcgcccagcagcccgggccttctttcttcctcctcagtggctctcggctgaggcgcggcggcgccgaaccttctctctcctcccctccaaaaaatcgaaaaaatctccactaaatcatcacaatttggaggggaaattgttggaggacatagtggcaaggtattctcctccgaatctctcgtcatttcgcattttttttgcttggattgctcattgatggatgaaccctagaatcgtgatttggggttattttccctaattagttggttctctactctgtggttgtagttgttgttggtgatgcaatgcttagatgttcatagaaccctaatttttagtggagatttttggcacttagggaagaaccctaatttttcccccaaattagtgaagaacacttcttttttttttaattttcatcacaatgcgagagttcaaatttaggatggatcgttacaaatggaagtttgtgtatgtttagatatttatggacaatttcgttgggggacatagttgtaggttagatttctttttattgcaaattcaagtttttaaaaaatgcaatatgctaatatgtcggttaatgttgtagatggatagattagtacgattgcactatggtggttcggtggtagagcaaagtaacagtggtagcaatttcgaggggatgagtgttaagcaacttatatttggtggaaaacctagttttgaggagttagtttgtcatacaaaggatgtgctggggtggagcaatcagtctatagctatacaaggtagatatgatgttggagcaggacccatttcacacaagtacatgctagatttgaatggggagttggagtggaacacatatgtggatatagtgttgggctcccaattcaagtcgcttgaggtggttgcttcgaagcttgatcgtactgactgcagagataattcttttgacctcaatcgcacactgttttatgatgaaccaaactatgaagcatttgatgatgaaggagctatgaaaagtcagtcggttaagtctttgacagttgaggaagtcatagaatctcaagggatgggggtggatgttaacatgcaaaagaaggaagcagttgatgcgaatgagggaaggagtcaggaatctgaaagggtggagataaatgtggagttgcagaaggaggaagcagttgaggctaataaggcaagcaggcttgaatcagaaggcgtggaggtaaatgtggaattgcagaaggaggaagcaatagaggtgaatgaggcaaggagtcaggcagttccgatagttggaaatcatgttgatgatgataatgaattggcagatggatcaatgggggcaggtggagaagagcgtacaacggatgctcaattagcatccatggtgcggttctattttcaagacaaaatatatactcggagggagtgtgaggagactttgttgatgaatggattgagtgttgatttgctgcacaaacattcagaggagtatgatgacacacatgaggaggagggatatgaggttgagtatgccgtagacttagatgacgatcgtccagtagccaagatgtcttaggaagaaagggaggtgtttgagaaattagttggacgcaatccagaggttgttcagttcgaggatgttagcaattctaagctagcagttgttgatggaggagtaacatacaatggcatcatcgatgcaatgggtgaggagccaaagaaggatgagcacatagggatcgacatcaacgccatgtgctacataccggaggatatgaagtttctcaggtgccccttgatttgcttctacgccgttgagtggcagctcatccatcgcgtgctaaggcagttcggcttgcgtcaacccataccaaaaccattcccgacggggctcgacctccacaagtaagatttgcattgtgcatatcattttcaaactttctcttcggcattggctactcaagttctaaccaaattatttgttttgttgaatgactgtaggttggacaacaagaagaacaagaagattacggactggcatgctcatcatctccatcttattgagcggtgggacaacacagcagctaacgtagtgcctcacggagtggagcacaacaagacatacttcgacgagtacctagcttggctcctaaggaactaccgccttttcctttggccggcatggactctagctgacatagctacagatcccgaggatgttgaggagatgaacgagtatgacacccacacttgagcaggggcgacggtcgagtatgggcctgtacgtgaccgagtggtaagtattaaggctcagagttgttcatttcacatacacctacatgttctcacaatattaaatccacttgcaggcacgtgagctgatgaggtccgtgaacgacgcgggtgttgcccttggcacacctgctgggtcagagaatgaagttgggatacttcggagcgcacttcaggtaattaaccaattagttcaatccatgaatcatttcacttgcctctaactaatttgttttgttcttgcagaggctaaaacaacgaagttggatgttagcggcaagacttggttgtaggtccacagacgcagtcgacccacaaccaagactaacacggacacaggccggagaaacaagtcaacaaagagctaaagaggaaggggaggaagaacatgatgaaggggaggaagaacatgaggaaggggaagaaggagatggacagagtgacgaagaggaagaggaacaacccgaagaaatcgggtcatctcagcttgcaggtgccccgcagccatcgcaaccttcccagggtcgcccgcagagaaagagggtaccggtggaccggtacacaccttccactagtggccggaggggtcggcactagtggattactttgtacttaacactctaggcagcgttagacttatatcaaactctagatgatggttgatggatgtgttgaactctatattttctgatggttgatggatgtgatgaactctaaatactgtgatggttgatggatgttcagttgctgtgatgtgttaaatactatgtggctgtcaattttgtgatgctaaatacttgtgtgatgctgtcaatttctgtgtggctggctgcgctttgccagctactgcttgacctcagcgccaaatagaatggcgctgagattgtacaccgaaggaaacggccgtcacgcactcagcgccgatgcggtcggcgctgagatgttcaacctcagcgccatcggccctggcgctgaggtcggggtccagatctggtgatagtttttgccagggaccaaatttgcaaatagttttcaaaaagggccaaattgtcaaattttcgggaattcttgtgtggctagcaattgtagggtagattggtatgacaagtgtacttgctagttggcatgcttttgattggacttgtgcgtacttgcactaattggccttgaactgaaaaagaacatcttgatcgaatttagtccacagaataattctagttcccaatttcaagcctgccagttgagaaaattgttcagttcaagttctgtgggtttctgtcagaccacaattttgcttccttgcagtaacattctgcattttgattagcaaggcaggatctatttaacagaattacatctcttacataatcgaaatatttccagccgacattttctgtaattttaaacctgtacgagaaaatactttcactcaaatatttccatctatttctaatttagtttgaaatatttgctgagatggacgaaaaatttgcatatctctctaatttcatcctgctctgaattcttcaataaaaaaagaaaccttgctaaccattgggttaatttggtactctcgccgtttgagaatataagatattttggttttaacctaagtcaaactttcgaagttccaccaagtttataggtaaaatagcaacatgtctcgcatgaccaatgatattataaaagtataatccatttttgtatttaatgaaattaatttggtgccgtatatgatgtttcatttttctataaacttgatcaaatttaaaagcaatttaagttaggataaatagagaacatttcgtatgtgcccatcagttttcgctgaattctttctatgttgaattttagttttatcctctacgtgcacatgagtttttattttgatccccactatacccatgccgttagttgaatgtaacttgaccgttaaatttttcaaaaattgactatattgcccttcttatacctactttaaaaacataaatcccaatgtgaaagaaatctataataaaataaaaaaggaacaaaattatatgacaccggatttaaaaacataaatctcaatgttataaacaaaatttaaaatttcagaaaattattttaaaaaggatgaaatccatataaagggttcagtaggaaattgaaaaaccaaaactttctcttatttgggattaattttgagttaaaattttgaaaaaaaaaccctcatcaattctggtatgtaacttcttgaaaatatttaaattttagttttcaaatttatgatccagtaattatgtacgatttgtttttataaatgaatcaacttttacattggaggccaccttttttaaatcaactagcacacgctccaagtaagagaaaagagtaatgttttactcttttaaactttccttgtagcggtggcgatgagtcttcctcaccgccatcacctattgatacttggaccccacaaagtgagccccacatagctagttttttttataaaatctaatggtcagctaatcgttaactcacggaatggcctttgagggatcaaatttgaaacttagggtatgtaggagatgaggcaaaatttagaagcgcgaagggataggcaaaaatttatgagtacacaagagacttaaaactgtcgacattttggaactttgactatggtataacttataatgtaactaacctacaactacattgtgaattttatataacttgtttgtaagttttatataatttgtattacactataactataattatagtttagttaaaatatagtaatactctctatattttaattttaaaatataatgtgtattttgttttgttagaaaaaactttaaccaataattattttattagaatatcatttatgtgacaaaaatttaaaatgataatcaagtacttttgaatatggaggtaataaatttaatttcgtgccatcaaaattatatcatagtagagtttttaaagccttgtctgaacaaaacaaaaaaataccgtgtattttgaaatggtgagagtatatttgaaaaaagaacttagaacaaatttgtggcagtttttttaacaattttattaaataaaaagggagtcctccgggttaataatacttgtcgttttggacaagagcacagtcttaaaaaacaactttaaccactattttctattataatatactatatagaagtgttaacaaatatatgattttattgaaggatttttttaatactaatctatacatataatcatcatatttcgaagataaatattttaaaaattatccataataaaaataaaatttaactatatctttatctaaaacgacaagcattgtaggaagctctatgttgacagttattcattttatacgtgcagggcctttgtaccataacggtatgtaccatttgttctacaagtacaacccgcatagcgcgctctgggacatcggcaacctctcctggggccactttgtctccggcgacctcctcaactgggccgctctcgacaccgcgctcgaccccacctcgccttttgacgccaatggctgctggtcgggctccgccaccatcctccccggcggcctcccggccatcctctacaccggcattgacgccggcaaggagcaggtgcagaacgtcgccttcgccaagaacccctccgatccgctcctccgtgagtgggagaagcccgcgtacaatccggtcatcgcgctcccgcccgacgtccccggcgacaacttccgcgacccctcgacggcgtggctcgggcgcgatggcctgtggcggatcgccgtctccgccgaggtggacggcgtggcgtccacgctcgtctacaggagcgaggacttcgtccggtgggagcggaacgccgcgccgctgcacgcgtcgcgcgccgccggcatggtggagtgcccggacatgttccccgtggcggagaacggcgaggatggcctcgacacgtcgacgaacggcgccggcggcgtgcgccacgtcctgaagctgagcgtgatggacacgctccaggactactacatggtcggcacgtacgacgacgcggcggacgccttctcgccggcggagcccgagcgcggcgacgactgccggagatggcggcggctggactacggccacgtgtacgcgtccaagtcgttcttcgacgcgcgcaagaccggcacgttctgtgggcgtgggcgaacgagtccgacagccaggccgacgacgtcgcccgcggctggtccggcgtgcagacgttcccgaggaagatgtggatcgccaaggacggcaagcagctgctgcagtggccaatcgaggagatcgagacgctgaggaggaagcgcgccgccggtctccggcgaggcaccaggctaggcgccggcgcggtgcaggagatcgtcggcgtggcgagctcgcaggcggacgtggaggtggtgttcaagattccgagtctggaggaggccgaaaggctggacgaccttggtgtttttttttttttgacagattgaccattcggtggtggagagcttcggcggcggcgggcgggcgtgcatcacggcgcgggtttacccggagcacgtggcgacgagcagcagccatttgtacgtgttcaacaacgggagcgacgacgttaaggtggccaagctggaggcgtgggacctggcgacggcgaccgtcaacgttgttgttggagaccaccacggccttgctgcgccggcgttggagttggagccgacacgtacgacgcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0255266, RefSeq:Os09g0255266