Os09g0260000

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0260000

Description

Cyclin-like F-box domain containing protein

Version

NM_001069240.2 GI:297609120 GeneID:4346544

Length

2711 bp

Definition

Oryza sativa Japonica Group Os09g0260000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5028028..5030738

Sequence Coding Region

5028071..5029315,5030510..5030524

Expression

GEO Profiles:Os09g0260000

Genome Context

<gbrowseImage1> name=NC_008402:5028028..5030738 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:5028028..5030738 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggaaaccctccaaaccctccttcctccgccgccggccgaggaagcgccgacgacgacggtcgccgccctcaccgacgacaccctccgcaacatcctccaccgcctcgcccccgccgacctcctccgcgccgccctcgcctgccaccgctggcgccgcgctgccgcacgctgcgccaagggcgcgcctcccccactcctcggctacttcttccacccggccgacacgcccccgccggtgcacttgcccttctcggcgtccaggggccgcctccaccccgccgccgtctcccccgtcgacgcctcctcctcctcctccccgcgcctctccctcgactacctcggcgggaccaagggcttcatcatctacgacgtctacctcggcctcgtgctcctcctcccgacctcgctcccgtccgggaccctcccccgcatcctcgtcctcgaccctgcctcccgccgccgcgcgctgctcccgcagcccccacgcgacgcgctgccgggcgaccgctggcgtggccgtcggcacatcgtcggcgccgccgtgctctcgcgcgcgcacccgagcaggctctgcttcgacgccgtctgcctcaccgtcgacgacaagcacccgcgcgcctgggtcgcgtcctaccgcgacggcgagtgtagctggagggcgctcccgcgggacaccggagtcacggtcgcgttcgacccctactggttcgagggccgctgcgtgcacgccgcgggggacatctactggcacatctgccactccggccgcctgctcaagctcgaccctgccacgctcagcttctcctacctgctagcgccgtccgagctgggggacagcaacaagaagttccgaatcggggagacgccggaggacgggcggctgggcatggcgaccgtggaggaccaggagatgcagttctgggtgcgcggggaggccagcgggagcgacaacggttggtttctgaggaagaggatgaacatgcgcaaggtgctcgacaccatcccggggttgcccagggacatgatgagccgtatcatctccatctggctcagcgacatcgactcagggcgcaccgggaagctgttcatcaagacacaggggtatgggcgctactccttccatatggataccggcaagctggaccgattggctactgaagatggaaaggagtatggccaccccatctacgcctactacgtggcctggcctcctgccttcctcgctccagaattggagggtgatgattactga</cdnaseq>

Protein Sequence

<aaseq>MASETLQTLLPPPPAEEAPTTTVAALTDDTLRNILHRLAPADLL RAALACHRWRRAAARCAKGAPPPLLGYFFHPADTPPPVHLPFSASRGRLHPAAVSPVD ASSSSSPRLSLDYLGGTKGFIIYDVYLGLVLLLPTSLPSGTLPRILVLDPASRRRALL PQPPRDALPGDRWRGRRHIVGAAVLSRAHPSRLCFDAVCLTVDDKHPRAWVASYRDGE CSWRALPRDTGVTVAFDPYWFEGRCVHAAGDIYWHICHSGRLLKLDPATLSFSYLLAP SELGDSNKKFRIGETPEDGRLGMATVEDQEMQFWVRGEASGSDNGWFLRKRMNMRKVL DTIPGLPRDMMSRIISIWLSDIDSGRTGKLFIKTQGYGRYSFHMDTGKLDRLATEDGK EYGHPIYAYYVAWPPAFLAPELEGDDY</aaseq>

Gene Sequence

<dnaseqindica>44..1288#2483..2497#gtccactcttcccctcctcacccacccaccaccatcaccagtaatggcgtcggaaaccctccaaaccctccttcctccgccgccggccgaggaagcgccgacgacgacggtcgccgccctcaccgacgacaccctccgcaacatcctccaccgcctcgcccccgccgacctcctccgcgccgccctcgcctgccaccgctggcgccgcgctgccgcacgctgcgccaagggcgcgcctcccccactcctcggctacttcttccacccggccgacacgcccccgccggtgcacttgcccttctcggcgtccaggggccgcctccaccccgccgccgtctcccccgtcgacgcctcctcctcctcctccccgcgcctctccctcgactacctcggcgggaccaagggcttcatcatctacgacgtctacctcggcctcgtgctcctcctcccgacctcgctcccgtccgggaccctcccccgcatcctcgtcctcgaccctgcctcccgccgccgcgcgctgctcccgcagcccccacgcgacgcgctgccgggcgaccgctggcgtggccgtcggcacatcgtcggcgccgccgtgctctcgcgcgcgcacccgagcaggctctgcttcgacgccgtctgcctcaccgtcgacgacaagcacccgcgcgcctgggtcgcgtcctaccgcgacggcgagtgtagctggagggcgctcccgcgggacaccggagtcacggtcgcgttcgacccctactggttcgagggccgctgcgtgcacgccgcgggggacatctactggcacatctgccactccggccgcctgctcaagctcgaccctgccacgctcagcttctcctacctgctagcgccgtccgagctgggggacagcaacaagaagttccgaatcggggagacgccggaggacgggcggctgggcatggcgaccgtggaggaccaggagatgcagttctgggtgcgcggggaggccagcgggagcgacaacggttggtttctgaggaagaggatgaacatgcgcaaggtgctcgacaccatcccggggttgcccagggacatgatgagccgtatcatctccatctggctcagcgacatcgactcagggcgcaccgggaagctgttcatcaagacacaggggtatgggcgctactccttccatatggataccggcaagctggaccgattggctactgaagatggaaaggagtatggccaccccatctacgcctactacgtggcctggcctcctgccttcctcgctccagaattggaggtaatttggaacacctttccttcaccattcttaacatttttgtttatgccaaattgtttgatcaatgcttaagtggattgcttgctcatgtggtttgttgcctgcagtacagtctgttgcacgcgcattagctttagtagatgtagagctgtattaaaatttgtaaggtcattatagcgattgatcgaatattgtaacagtgttgaaagtcgtaagatatctcaagcaatctttgaaactagacttatgtttcttgaaaattgttgagttttgtacagttaaataggctttgttgtttggtactgggctgctttagctgattcctcttgataccaaataacctgagagcttaaatatatcaagcattcaaaatgtaatgtaataaattattgtattgcattgcattgcattgttcaacctgtacttttgtttccatagttttgatcttgcataatgcagtaatatgtgtgattctgtatttcataggtgtgaaatatgtcagagtgttgtactcaatctgttagtaagcatgtggttacaatatttgtatgttggccatgaagaatatttatattttttgttttctttccagctttactcccatttgtggagccccatacaacaaattagtttagcaggtcttttaagtcacaaagagaatggtctaccaagtcttaaaatgttactacttgctgattattgtggcaccaattattacaggaatcagatatgtctttgaaactaattaggcttattgattattgctagcactgtctagtattttttttcaatcggtcaatttgaagataataaatatagaagaataggatattattgctgtcataaactttcgtatagtggttcatcgttgttttacctattgttcaatgttcaatcttcattgtggaaaacaatgtaggctgtcactataaaaacgtatttttttttgggttctgggatgtcgaatttagcaatttgctttgcttgatgcaatccatttcactcctaaacttttaccttcttgtgaacttctatcaagaaatggctcatgttacaccttcatatgtaagcataataattatacttgtgctgatgatcaacatgcttttgatttatccatctcttgttatgcaattgcaatatctttgattcattggctctggaactgatgattttgtcattcttgtgatttagggtgatgattactgagacaaggttaccagccaactcactcccttccttttctgggtcaccaatgccattcctgattcactcatgagtccttaccgagcagtgagcacgcgaggaatttttgaggaccttattctgcatgagactaactaattcccagtagttctatgctgtcatttaagcatacttcaactagattaagagattaagacagtgggatggcattgcacat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0260000, RefSeq:Os09g0260000