Os05g0468700

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0468700| Description = Ammonium transporter| Version = NM_001062336.1 GI:115464402 GeneID:4339064| Length = 4213 bp| Definition = Oryza sa...")
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Gene Name

Os05g0468700

Description

Ammonium transporter

Version

NM_001062336.1 GI:115464402 GeneID:4339064

Length

4213 bp

Definition

Oryza sativa Japonica Group Os05g0468700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23055024..23059236

Sequence Coding Region

23055343..23055966,23057171..23057456,23058441..23058991

Expression

GEO Profiles:Os05g0468700

Genome Context

<gbrowseImage1> name=NC_008398:23055024..23059236 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23055024..23059236 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgggggcgtactcggcgagcctaccggcggtgccggactggctgaacaagggggacaacgcgtggcagctgacggcgtcgacgctggtggggatccagtcgatgcccgggctggtggtgctgtacggcagcatcgtgaagaagaagtgggcggtgaactcggcgttcatggcgctctacgcctacgcgtcgtcgctgctggtgtgggtgctggtcggcttccgcatggcgttcggcgaccagctgctgccgttctggggcaaggccggcgtggcgctgacccagagctacctcgtcggccgcgccacgctgccggccaccgcgcacggcgccatcccgcgcaccgagcccttctacccggaggccacgctggtgctcttccagttcgagttcgccgccatcacgctcgtcctcctcgccggctccgtcctcggccgcatgaacatcaaggcctggatggccttcaccccgctctggctcctcctctcctacaccgtcggcgccttcagcctctggggcggcggcttcctctaccgctggggcgtcatcgactactccggcggctacgtcatccacctctcctccggcatcgccggcttcaccgccgcctactgggtggggccaaggctgaagagcgaccgtgagcggttctcaccgaacaacatcctgctgatgatcgcgggcggcgggctgctgtggatggggtgggccgggttcaacggcggcgcgccgtacgccgccaacatcgcggcgtcggtcgccgtgctcaacaccaacgtctgcgccgccaccagcctcctcatgtggacctgcctcgacgtcatcttcttccgcaagccgtccgtcatcggcgccgtgcagggcatgatgaccggcctcgtctgcatcacccccggcgcagggctggtgcagacctgggcggccgtggtaatgggcatcttcgccggcagcgtgccgtggttcaccatgatgatcctgcacaagaagtcagcgctgctgatgaaggtggacgacacgctcgccgtgttccacacccacgccgtggcggggctcctcggcggcatcctcacgggcctcctggccaccccggagctcttctccctcgagtccacggtgccgggactccgcggcgcgttctacggcggcggtatcaagcagatcggcaagcagctcggcggcgccgcgttcgtgatcgcgtggaacctcgtggtcaccacggccatcctcctcggcatcggcctgttcatcccgctgcggatgcccgacgagcagctcatgatcggcgacgacgcggcgcacggcgaggaggcctacgcgctgtggggcgacggcgagaagttcgacgcgacgcggcacgacctgtcgaggggcggcggaggcggcgacagggacggccccgccggcgagcgcctctccgccctaggcgccaggggcgtcaccatccagctctag</cdnaseq>

Protein Sequence

<aaseq>MAAAGAYSASLPAVPDWLNKGDNAWQLTASTLVGIQSMPGLVVL YGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLV GRATLPATAHGAIPRTEPFYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTP LWLLLSYTVGAFSLWGGGFLYRWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRE RFSPNNILLMIAGGGLLWMGWAGFNGGAPYAANIAASVAVLNTNVCAATSLLMWTCLD VIFFRKPSVIGAVQGMMTGLVCITPGAGLVQTWAAVVMGIFAGSVPWFTMMILHKKSA LLMKVDDTLAVFHTHAVAGLLGGILTGLLATPELFSLESTVPGLRGAFYGGGIKQIGK QLGGAAFVIAWNLVVTTAILLGIGLFIPLRMPDEQLMIGDDAAHGEEAYALWGDGEKF DATRHDLSRGGGGGDRDGPAGERLSALGARGVTIQL</aaseq>

Gene Sequence

<dnaseqindica>320..943#2148..2433#3418..3968#ggaggctttggctaccctgctcccctcgccatttcattggccgtttcgtggccatccatcacgaactcgatcgattcccctcttcgagcccgtaccaattattagctagtttaactcgtacgatgaatcacgccgaaacacaatataaatggtggagtcggctcgctgtcaaacgcgcgggagctcgcgccacttgtaatttttcgcgtctcctctcgtccggcacagcacaggagcgcggacttgaagacctcaagtagcgattcgtccgtgcggcgcggcgcaagaagggaagggaaggggactaggggagggcgagatggcggcggcgggggcgtactcggcgagcctaccggcggtgccggactggctgaacaagggggacaacgcgtggcagctgacggcgtcgacgctggtggggatccagtcgatgcccgggctggtggtgctgtacggcagcatcgtgaagaagaagtgggcggtgaactcggcgttcatggcgctctacgcctacgcgtcgtcgctgctggtgtgggtgctggtcggcttccgcatggcgttcggcgaccagctgctgccgttctggggcaaggccggcgtggcgctgacccagagctacctcgtcggccgcgccacgctgccggccaccgcgcacggcgccatcccgcgcaccgagcccttctacccggaggccacgctggtgctcttccagttcgagttcgccgccatcacgctcgtcctcctcgccggctccgtcctcggccgcatgaacatcaaggcctggatggccttcaccccgctctggctcctcctctcctacaccgtcggcgccttcagcctctggggcggcggcttcctctaccgctggggcgtcatcgactactccggcggctacgtcatccacctctcctccggcatcgccggcttcaccgccgcctactgggtacgttcgtctctcgttttttttcctttctttctttctttcctctcctcagttggatcacatgtcattgtcggaatcatgacgtcacccaccccggtttttttgatccggcgacttcactgttccggcgtctcgggtttgtccaacgcgtgttaggtactggtactaccctgtaccatttgtttgacccatcaatctggattcctcatgagaatgcatcacactccatgacaaaattctcaatagaatttagtcgtagtacgtacaatgtctagaccagaaattacttcatgttcaaagtcaccatgggggaaaattagtagaaaataatggaaatcaatgcatcagctggttgtagatttttttttctaccctttgggaagtcacatgatacgtagcatcacattgccgctgataggctgatagctgcacccaataaaagggttaaaacaccttttaccacatggaatgtgtgaacattggaccgcgtccatttgcttcggctggtgggcggcggtgatggctgccgctgcctgccgtgcccggaagacttcgttggcgcgcgctccattttttttccttccttttgttcttgcggttgctgttgtgtttggggtcgcaatcgtgtgtgccactttgcagcagcaagcagatacacgcgagcttattaagaaatggtgtggttccacaccaacaccaggaaattcagtctagcgtcgtggccggaaatttattatctcgatcgttgtcgtcgatagtaactgcacgctaaaatatctggtgatattgcttctcgtgttatccaacttgtgtggctaatggtttgggtcaagaatagagaaaacggcaagttaaaaatgggcttattttctgagtttcttttgtgatcggactatctgaattttgcaaggactgtactagctaggcacgtttggaatgaaaatctttttccgtaataatccgaaaataaactttttctacaaagtcgaatagaatcatcttgcgcgttgaattttgcaaggactgtactagttagtagctttttcatgcacggatggttttttacattaaaaattttgacaccttgagttacctaccaaattttataatttaaaaatgtatgactcctaatatattttcaaagatgctaaaaccaccctttaaccaatcgtccattaagacttctaatgcgtgtggctggcaggtggggccaaggctgaagagcgaccgtgagcggttctcaccgaacaacatcctgctgatgatcgcgggcggcgggctgctgtggatggggtgggccgggttcaacggcggcgcgccgtacgccgccaacatcgcggcgtcggtcgccgtgctcaacaccaacgtctgcgccgccaccagcctcctcatgtggacctgcctcgacgtcatcttcttccgcaagccgtccgtcatcggcgccgtgcagggcatgatgaccggcctcgtctgcatcacccccggcgcaggtaccatcacgaaaaatctccactccttataatttctgaatttatcatgtcccatttagaacacggagattttatatatttgaaatgataaaatattaatagtggtaatgttcgttatttcacatcatccctaatcccctattactgatatttgagccttacaatcaacgagtctatcaacgagtcttcttccattttattattggctctttctaaatttcgaaataacctaattgattgtgaatatgttattaattgacttagtaagctataaaagggagaatagctaatatggtccttaatctttcatattgtacaaacaagccctttaattttgtcatatgtgttatatagtccttggtctcaccaaaatcgtcacatagatatgccatgtcacattcctatgcaaaatctatatgatttgtccaatttaccttacatatatcataggaaaataaaaaacaaaaggtaaaatataagagcaaaaatatacctcaaaagggtgaaaaaaaggataactattttttcctatagttatgtctaattcacccttatatttatttttctacgatatacacgtaagggtaaattggacaattcatcatagattttgcataaatgatgacatggcatatccatataatgattttggtggatccaagaactattctagaccttatgacaaagtttaaggatttctttagaccatttaaaaggttagggactaaactgatcctacagaaaaactttagggactaaagtagctattctcccgctataaaaactcttctttcttttttgcaacgcacggttcctggctagtcttggaatgattctacatttatatccgaggcaaataaaaagaagtttcgtatgtttttaggtccggttttgcaattgttgtcctatgctgcgttgtgcttgtgcttatttttccaaatgtcagcagtaatttgttggttttattcacaattgtgtaagcagggctggtgcagacctgggcggccgtggtaatgggcatcttcgccggcagcgtgccgtggttcaccatgatgatcctgcacaagaagtcagcgctgctgatgaaggtggacgacacgctcgccgtgttccacacccacgccgtggcggggctcctcggcggcatcctcacgggcctcctggccaccccggagctcttctccctcgagtccacggtgccgggactccgcggcgcgttctacggcggcggtatcaagcagatcggcaagcagctcggcggcgccgcgttcgtgatcgcgtggaacctcgtggtcaccacggccatcctcctcggcatcggcctgttcatcccgctgcggatgcccgacgagcagctcatgatcggcgacgacgcggcgcacggcgaggaggcctacgcgctgtggggcgacggcgagaagttcgacgcgacgcggcacgacctgtcgaggggcggcggaggcggcgacagggacggccccgccggcgagcgcctctccgccctaggcgccaggggcgtcaccatccagctctaggcgcgccacgccacgccacgccgcgccgcgccgcggcctggcctctaattacacgcgcgtttgtactgtttttggacgtgttattgtttaggagtagtgaagtgaaccaacgattgactgcaaggtgaagggtgagaacgcgagagaccagaccactatagtctatagtacatatggatgctgtaatgatgttgatccgagttcgtttttccaacacgataaaggccgacatgcctattaaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0468700, RefSeq:Os05g0468700