Os05g0469600

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0469600| Description = Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC)| Version = NM_001062338.1 GI:115464406 GeneID:4339066| Length = ...")
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Gene Name

Os05g0469600

Description

Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1) (PDC)

Version

NM_001062338.1 GI:115464406 GeneID:4339066

Length

2715 bp

Definition

Oryza sativa Japonica Group Os05g0469600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23104625..23107339

Sequence Coding Region

23104747..23105271,23105374..23105537,23105631..23106281,23106381..23106498,23106591..23106779
,23106904..23107074

Expression

GEO Profiles:Os05g0469600

Genome Context

<gbrowseImage1> name=NC_008398:23104625..23107339 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23104625..23107339 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcttgccctggttggcaacccttcgaatggcgtggcgaagccgtcgtgcaactccgtcggctcgctgcccgtcgtcagctccaacgccgtcatcaacccgccggtgaccagcgcggcgggcgccacgctcggcaggcacctcgcgaggcgcctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctgctcgactacctcatcgccgagcccgggctcaagctcatcggctgctgcaatgagctcaacgccgggtacgcggccgacggctacgcccgcgcccgcggcgtcggcgcctgcgccgtcacgttcaccgtcggtggcctcagcgtgctcaacgctatcgccggcgcctacagcgagaacctccccgtgatctgcatcgtcggcgggcccaactccaacgactacggcaccaaccgcatcctgcaccacaccatcggcctcccggacttctcacaggagctccgctgcttccagaccatcacctgctaccaggccgtcattaacaacctcgacgacgcgcacgagcagatcgacaccgccatcgcgacggcgctaagggagagcaagcccgtctacatcagcgtgggctgcaacctggcaggcctctcccacccaacgttcagtcgcgagccagtgccactattcatctcgccaaggctgagcaacaaggcgaacttggagtacgccgtcgaagccgcggcggacttcctgaacaaggcggtgaagccggtgatggtcggtgggccaaagatccgggtggccaaggcgaagaaggcgttcgccggcatcgcggagtcgagcgggtacccgttcgcggtgatgccgtccgcaaagggcctcgtgccggagcaccacccgcggttcatcggcacgtactggggcgccgtgagcaccaccttctgcgccgagatcgtcgagtccgccgacgcctacctcttcgccggcccaatcttcaacgactacagctccgtcggctactccctgctgctgaagcgggagaaggccgtcatcgtgcagcctgaccgcgtggtggtcggcaacggcccggcgttcggctgcatcctcatgacggagttcctcgacgcgctcgccaagcgcctcgaccgcaacacgacggcatacgacaactaccgccgcatcttcatccccgaccgcgagccgcccaatggccagcccgacgagccactcagggtcaacatcctcttcaagcacatcaaggagatgctgtctggcgacaccgccgtcatcgccgagaccggcgactcgtggttcaactgccagaagctcaggctccccgagggctgcgggtacgagttccagatgcagtacggctcaatcggttggtccgtcggcgccacgctcggatacgcccaggcggccaaggacaagcgcgtcatctcctgcatcggcgacggaagcttccagatgacggcgcaggacgtgtcgacgatgctgcggtgcgggcagaagagcatcatcttcctcatcaacaacggcgggtacaccatcgaggtggagatccacgacgggccgtacaacgtcatcaagaactgggactacaccggcctcatcgacgccatccacaactctgacggcaactgctggacaaagaaggtccggactgaggaggagctgatagaggcgatcgcgacggcgacgggcgccaagaaagactgcctctgcttcatcgagatcatcgtgcacaaagatgacacgagcaaagagcttctcgagtggggatccagggtctcggctgccaacagcaggccgcctaatccccagtga</cdnaseq>

Protein Sequence

<aaseq>MELALVGNPSNGVAKPSCNSVGSLPVVSSNAVINPPVTSAAGAT LGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYAR ARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPD FSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTF SREPVPLFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAE SSGYPFAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSS VGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEFLDALAKRLDRNTTAYDNYRRIF IPDREPPNGQPDEPLRVNILFKHIKEMLSGDTAVIAETGDSWFNCQKLRLPEGCGYEF QMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLIN NGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGA KKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ</aaseq>

Gene Sequence

<dnaseqindica>123..647#750..913#1007..1657#1757..1874#1967..2155#2280..2450#gtcacaactcacagccaaaacctcgtacattttcagctagccacaagcaacacaagtccaagacaagtcaagcgttcgcaccaagtcaaaccgcgcctcactgccaccttcgtttgcgcaccatggagcttgccctggttggcaacccttcgaatggcgtggcgaagccgtcgtgcaactccgtcggctcgctgcccgtcgtcagctccaacgccgtcatcaacccgccggtgaccagcgcggcgggcgccacgctcggcaggcacctcgcgaggcgcctcgtgcagatcggcgccaccgacgtgttcgccgtccccggggacttcaacctcaccctgctcgactacctcatcgccgagcccgggctcaagctcatcggctgctgcaatgagctcaacgccgggtacgcggccgacggctacgcccgcgcccgcggcgtcggcgcctgcgccgtcacgttcaccgtcggtggcctcagcgtgctcaacgctatcgccggcgcctacagcgagaacctccccgtgatctgcatcgtcggcgggcccaactccaacgactacggcaccaaccgcatcctgcaccacaccatcggcctcccggacttctcacaggagctccgctgcttccagaccatcacctgctaccaggtccgcgcaatgagccctgcctctcgtctttcttttgcactggatgtctggatgaatttcgtcgaacacctgagctgaacagagtgcgttgcacgcatgcaggccgtcattaacaacctcgacgacgcgcacgagcagatcgacaccgccatcgcgacggcgctaagggagagcaagcccgtctacatcagcgtgggctgcaacctggcaggcctctcccacccaacgttcagtcgcgagccagtgccactattcatctcgccaaggtagtgaactaaacatacatgatacatgcacgcatctcgggttaaaatcttcttttctccatagtttctcaattttgacatatgtcctatcaggctgagcaacaaggcgaacttggagtacgccgtcgaagccgcggcggacttcctgaacaaggcggtgaagccggtgatggtcggtgggccaaagatccgggtggccaaggcgaagaaggcgttcgccggcatcgcggagtcgagcgggtacccgttcgcggtgatgccgtccgcaaagggcctcgtgccggagcaccacccgcggttcatcggcacgtactggggcgccgtgagcaccaccttctgcgccgagatcgtcgagtccgccgacgcctacctcttcgccggcccaatcttcaacgactacagctccgtcggctactccctgctgctgaagcgggagaaggccgtcatcgtgcagcctgaccgcgtggtggtcggcaacggcccggcgttcggctgcatcctcatgacggagttcctcgacgcgctcgccaagcgcctcgaccgcaacacgacggcatacgacaactaccgccgcatcttcatccccgaccgcgagccgcccaatggccagcccgacgagccactcagggtcaacatcctcttcaagcacatcaaggagatgctgtctggcgacaccgccgtcatcgccgagaccggcgactcgtggttcaactgccagaagctcaggctccccgagggctgcgggtaagcgccacgcaccattcatctcgtttcccggcaactatccactctacacgtcagcttcccaaaagtcaataacgaaaggctggtcattcccaacaggtacgagttccagatgcagtacggctcaatcggttggtccgtcggcgccacgctcggatacgcccaggcggccaaggacaagcgcgtcatctcctgcatcggcgacggaagcttccaggtgcgtcctctgctcatctgctgctgctgctatctcctctgtttctcgccaatggcggcggctgtgctaatgtgcgtgtgcacgatatacagatgacggcgcaggacgtgtcgacgatgctgcggtgcgggcagaagagcatcatcttcctcatcaacaacggcgggtacaccatcgaggtggagatccacgacgggccgtacaacgtcatcaagaactgggactacaccggcctcatcgacgccatccacaactctgacggcaactgctggacaaagaaggttaatttcaaacaccactccactaccactactactctactagtagtactataaatacggctaagtgccattcgactggtcgatcgtgacagctaaaaacttcttccccgctctttttctacaggtccggactgaggaggagctgatagaggcgatcgcgacggcgacgggcgccaagaaagactgcctctgcttcatcgagatcatcgtgcacaaagatgacacgagcaaagagcttctcgagtggggatccagggtctcggctgccaacagcaggccgcctaatccccagtgatcttgctgctcgtcttctcaggacgcacactcgaaattgctgggctgccaatgtctaagatgtgctgcttatcatcgtctgtgaattaattgtttaacgcttctgtttctgtatccattcaaaattttcttagagaagaggttgaattagtacatgtcgatgggtgttacctatcctatgataatgtatgtaattcaaatgcttggaattaatgttttgtaaacctacactatattgcgatgcaataacatggacgatttgaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0469600, RefSeq:Os05g0469600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0469600&oldid=14405"