Os05g0471000

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0471000| Description = Similar to Ser-thr protein kinase (Fragment)| Version = NM_001062347.1 GI:115464424 GeneID:4339075| Length = 4290 bp...")
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Gene Name

Os05g0471000

Description

Similar to Ser-thr protein kinase (Fragment)

Version

NM_001062347.1 GI:115464424 GeneID:4339075

Length

4290 bp

Definition

Oryza sativa Japonica Group Os05g0471000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23158703..23162992

Sequence Coding Region

23159024..23159586,23159685..23159817,23159899..23160089,23160269..23160717,23161233..23161328
,23161408..23161551,23161649..23161720,23162302..23162437,23162538..23162628

Expression

GEO Profiles:Os05g0471000

Genome Context

<gbrowseImage1> name=NC_008398:23158703..23162992 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23158703..23162992 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacgaggaggaggaggaatccggtgatattcttgttcttgtggttcgtcatggcgtttgagctgtgtgcatctctgaatcatgaaggtgtcgctcttatgaggtttaaagagatgattgatgctgacccatttgatgctctgttggattgggatgaagggaacgccagcccctgttcttggttcggtgtggagtgctcggatgatggtcgagttgtggccctgaacttaccaaatcttggtctaaagggtatgctacctcaggagattggaacacttgcccatatgcgttccatcattctacacaataactctttctatggaatcatccccacagagatgaaatatttacatgagttaaaggtgttggatctaggatacaatactttcagcggaccatttccatcggagctaagaaatattttatccctgaaatttctctttctcgaaggcaacaaactttctggcagtttgccaattgaatatgagctcgcctcgatggaccagacttctttaaataagatatctacagaaaggaacgaagagaatgccacaagaagaaaacttctagcaagcaaacaaaaacgttcccaaaagaacaggatgcttttgtctggaacatctgaatcaccactggaaaatgttacaatgccaaagtctcaccctgataatataacagtgccacatcgtcccgtagctcctcgatcaagttctccacagccgccactcccttccgaacccattccctcccctgccccttctatgccctcccctgccccttctgtatccaccactacaaacggaacttcaggccaagaaaacaagagcaagacagcaatatatgcatccatcggaggagtggcctgcttggtggttgtggccatgtcagctgcactcatcctttgttaccggcacaggaagactagtactgtggtacctttttctccaacagcaagtgggcaattacatactgctactttgggaggaataactaaattcaaacgctcagagcttgaaacagcctgtgaaggtttcagcaacataattgacacactacctagattcacattgtataaaggaactctcccgtgtggagcagaaatagctgctgtgtctacattggtgacttacgcaagtgggtggacaactgtagctgaagcacaattcaaggataaggttgaagtcttatcaaaagtgagccataagaatttaatgaaccttgtgggttactgtgaagatgaagaaccattcactcggatgatggtgtttgagtatgtttcaaatggaacactgtttgaacacttgcatgttaaagaagcagaccaattagactggcagtcatgcttacggatagcgatgggagtgatgtactgtctgaactacatgcaacagctgaaccctcctgtactgctgagagacctaagtacttcttgcatatacttgactgaagacaatgctgcaaaggtttccgacatcagtttttggggtgataaaaaagaagacgaaaaatctgaggcttctgatgagcacatcacagtttataagtttgctttgcttctgcttgagacaatctctggaaggcgcccatattctgatgattatggcctccttattctttgggcacatagatacctcattggtgacaaacccctgatggacatggttgaccccacactcaaatcagtccctgaggagcaagtcagagaactcacaaagctggtgaaattatgcttaagtgaagatcccatggagaggccaacggtggcagaggtaaccgcatggatgcaagagatcactgggatttctgaagaagaggcgattccaaaaaatagtccgttgtggtgggctgaacttgagatcatcacatcataa</cdnaseq>

Protein Sequence

<aaseq>MGTRRRRNPVIFLFLWFVMAFELCASLNHEGVALMRFKEMIDAD PFDALLDWDEGNASPCSWFGVECSDDGRVVALNLPNLGLKGMLPQEIGTLAHMRSIIL HNNSFYGIIPTEMKYLHELKVLDLGYNTFSGPFPSELRNILSLKFLFLEGNKLSGSLP IEYELASMDQTSLNKISTERNEENATRRKLLASKQKRSQKNRMLLSGTSESPLENVTM PKSHPDNITVPHRPVAPRSSSPQPPLPSEPIPSPAPSMPSPAPSVSTTTNGTSGQENK SKTAIYASIGGVACLVVVAMSAALILCYRHRKTSTVVPFSPTASGQLHTATLGGITKF KRSELETACEGFSNIIDTLPRFTLYKGTLPCGAEIAAVSTLVTYASGWTTVAEAQFKD KVEVLSKVSHKNLMNLVGYCEDEEPFTRMMVFEYVSNGTLFEHLHVKEADQLDWQSCL RIAMGVMYCLNYMQQLNPPVLLRDLSTSCIYLTEDNAAKVSDISFWGDKKEDEKSEAS DEHITVYKFALLLLETISGRRPYSDDYGLLILWAHRYLIGDKPLMDMVDPTLKSVPEE QVRELTKLVKLCLSEDPMERPTVAEVTAWMQEITGISEEEAIPKNSPLWWAELEIITS </aaseq>

Gene Sequence

<dnaseqindica>3407..3969#3176..3308#2904..3094#2276..2724#1665..1760#1442..1585#1273..1344#556..691#365..455#tctccgcattctgttttctactattcgctagtatactgctactagttcttcttcttcttcttctgtctgatccaccagcaaggttaggttaggcttcttcttgagcaagcgattcggggtagttgagctggttgcaaccccgctttgttgattcgttctttggcggcaaattcgatattctgtttcgctcccccctgggtttctgcttggaatttagggggtcacgagagcaaaccacgcggtcccgttcttgaattgctggagaggggtggggaagaaagatcgggggaagaggggacgcgagctcagcgggctttggtgcttaagttctttcgggtttgtgttcttgtgaagttcctctggcatggggacgaggaggaggaggaatccggtgatattcttgttcttgtggttcgtcatggcgtttgagctgtgtgcatctctgaatcatgaaggtgccggaccgtgatttggatagtttctttggtttatactctttcttgtccatctttttttctcgactctcgctttaagggttttgttgctgaattgcaggtgtcgctcttatgaggtttaaagagatgattgatgctgacccatttgatgctctgttggattgggatgaagggaacgccagcccctgttcttggttcggtgtggagtgctcggatgatggtcgagttgtggccctgtaagtttttcacttatgtgcagtaaaagagataggagacccagaaaataacctttctattcatttggaagaaatgaactgccttaactaagctgcgatctgggaaaaaaaaactataatcttaaatttactcgtttagattgaattagatcttgccattccatttttgttgcataacgtcattagtagcattgcagtagtagtgataattgacattttttggtgtatagggaccatctgcatgggacaattttttttctcacaccctgtttaggagggctctagattcatctgtagagcatcgtcactttactgtctttgtttacatttttcacacaagtttgtgcgggtgggtgtgggtattcatttagtagcagttaacagtattgtgcctgctgcaattctatgttatctattattgtgtgatgcaatggcaccacagagagtctatggtttttaatctggaataagacagcggtttgttcttttgtcatacttaatattcatagtatatccctatgctactattgatcatgtctttgcttgcgtttccccttagtttgagtgtgcaattgttgtaggaacttaccaaatcttggtctaaagggtatgctacctcaggagattggaacacttgcccatatgcgttccatgtaagcatattcagtactttcttctaaacacattgacattttgcttgcaaagcggtattccacatacttactgttctatttttaatttatgtttcagcattctacacaataactctttctatggaatcatccccacagagatgaaatatttacatgagttaaaggtgttggatctaggatacaatactttcagcggaccatttccatcggagctaagaaatattttatccctgaaatttctgtacgtgagaagttcagtatggcactttaatctgaatttagtccaactgcatgatcttaatattagtaccttgtttcagctttctcgaaggcaacaaactttctggcagtttgccaattgaatatgagctcgcctcgatggaccagacttctttaaataagatatctacagaaaggtacctgtttctaatgatacttgttatttgtgcaaatgtttaaaattttgagtccaagttcttctagcaaataaaataaaattgggaactctttgattctgtcactgtatttatggtgtcaacaatatcttagtttcttactatcctagacctttatttaattgtaacatatattctagggtatctgaaattagtgaaattatataaaactgaaaagtgtcaaagcaagctaaactgctgtaaaaactgatcctccacatggtaactcctaaacctatatcatttccttggtgtggcaaatgaatggaatgaagactggtttttattttattttttatgaaggggatagctttattaatatgcattactgtagttcagtactttaatctatcaactatagcatggggtaccattacttaggtaataatgttaactgtgtttctttggttgatggaaatcctgatgaccttatgatgattcttttattctctaacagtcacttaatcttctagtaggaacgaagagaatgccacaagaagaaaacttctagcaagcaaacaaaaacgttcccaaaagaacaggatgcttttgtctggaacatctgaatcaccactggaaaatgttacaatgccaaagtctcaccctgataatataacagtgccacatcgtcccgtagctcctcgatcaagttctccacagccgccactcccttccgaacccattccctcccctgccccttctatgccctcccctgccccttctgtatccaccactacaaacggaacttcaggccaagaaaacaagagcaagacagcaatatatgcatccatcggaggagtggcctgcttggtggttgtggccatgtcagctgcactcatcctttgttaccggcacaggaagactagtactgtggtacctttttctccaacagcaagtgggcaattacatactgctactttgggaggttggttgttaatttgatatgctattgaatttataccattcttggtttaattattattcagtttacatattgagttgtgtttcaacgagtttggcatgttcccgagttatgttatatttcattcttctttggacgcataaagcagcatttagaatcaacatccaattgttgttttgcaggaataactaaattcaaacgctcagagcttgaaacagcctgtgaaggtttcagcaacataattgacacactacctagattcacattgtataaaggaactctcccgtgtggagcagaaatagctgctgtgtctacattggtgacttacgcaagtgggtggacaactgtagctgaagcacaattcaaggataaggtatataatggttttttctgtattatttcttccgcagggaagatgtttacttactaacatggatatgctatggtgttctaggttgaagtcttatcaaaagtgagccataagaatttaatgaaccttgtgggttactgtgaagatgaagaaccattcactcggatgatggtgtttgagtatgtttcaaatggaacactgtttgaacacttgcatggtaagaaaacttcacatttagtttgttattcttcgcaccaagatcagtcacgctatcagcagctattcatgatcaccattaaaacattgttgttgcagttaaagaagcagaccaattagactggcagtcatgcttacggatagcgatgggagtgatgtactgtctgaactacatgcaacagctgaaccctcctgtactgctgagagacctaagtacttcttgcatatacttgactgaagacaatgctgcaaaggtttccgacatcagtttttggggtgataaaaaagaagacgaaaaatctgaggcttctgatgagcacatcacagtttataagtttgctttgcttctgcttgagacaatctctggaaggcgcccatattctgatgattatggcctccttattctttgggcacatagatacctcattggtgacaaacccctgatggacatggttgaccccacactcaaatcagtccctgaggagcaagtcagagaactcacaaagctggtgaaattatgcttaagtgaagatcccatggagaggccaacggtggcagaggtaaccgcatggatgcaagagatcactgggatttctgaagaagaggcgattccaaaaaatagtccgttgtggtgggctgaacttgagatcatcacatcataaaaagccagttcattgcgcaatattattgctgcggcaacggtgtccattcttgcctagatcacagcaaattgtacagtcgtttaggacccattttgggcaggcaattcagttgtacagatatgcctgcactgctcacacccattctttcattctttggttcatgaaacacacataatctctgaagtccactaaacagttgtgacgaaagcgaggagtataaattttctactagtttctacacacaattcctgcactgaacagatttgtttgaacagttgagtctactcagagatacctgaagtctgatggttgatacttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0471000, RefSeq:Os05g0471000