Os09g0314100

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0314100

Description

Disease resistance protein family protein

Version

NM_001188832.1 GI:297726794 GeneID:9268947

Length

8069 bp

Definition

Oryza sativa Japonica Group Os09g0314100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9129989..9138057

Sequence Coding Region

9129989..9130174,9130350..9130706,9130789..9130911,9131109..9131423,9131514..9131582
,9132053..9132114,9132817..9132929,9133290..9133354,9134124..9134174
,9134273..9134314,9134685..9137774,9137995..9138057

Expression

GEO Profiles:Os09g0314100

Genome Context

<gbrowseImage1> name=NC_008402:9129989..9138057 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9129989..9138057 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaacgacaaacaggttctgtgcttggtacatctttaagacgagagtatcctgggttggttaaagaatatgcaggtcctggacaacgtaaaagaaagagattggccatgtcatggggtcactactttggggagaaggatcataatggcatgacagctggtaatagagtaaaagatgaattctggtcattcttcactacccaagaagaagacatggaggagctggacaagaatattgacaactattgtcaagctagagttccaaagataatttgccaggcacgtgtagatgctatgaagaagtactatggtaaagggatcaaaggaaaaaatgccagcgccattgaactcaattttgagcagtacatgacatgcaaattagattggattaatgtggacgcttggaagtgcttttgtcactggtggacatcagataagtacaaggagaagcgcaaaagaggtcaagatgcacgttttgctaatgaagactatgctcaacagcagggaggatctcttccattctgcactatacaacaaaacctggtgtatcaacttggaccagaaaatgcaagtggcttggatacctacagagttcaaatggctggctttaaagcctcactcaaagggtctggccaaatccgcagcgagaaagtcaaacaaagaattaatatttactgccaagtttatcacgaagaacgtggtgaggagcatcaacctgtgagcagtgagttagatgggaatgtggtatataaagcttttggtggactgaaacatggacggtttgcaatgggcaacggagttttcaagaaaactgaagttcttgctgctgttaaacataagaaatctggaatatctggatctacgaattcttacaatgctgtagtgcgtgagaatgcacaacttcgccatgaagtgactgaacagcgtggaatgatacgtgaacagcgtggaatgatacaagaacatcgtggaatgctaaaggcagtatatgagaagcttggaatggacatacctgaggaggtactttcaaggtgggagtcacaaagagaggattctgaattagatgtggactgttctgaggggtctgaagagtatgaaatagaggaagaagatgaggggcagtcaccaaaattccgttctcttgtagtggatgggccgccgccctccggccgacacaacctcgccaccctcgtcggcggcgccggcgccggcgccgcctccgccgggaaggaatgcaacagcaatgcagcatcacggggacagtaccagaatttccatgaaattccaccggatgatgctgattttaataaccttacaatttacttgaagtcagcatcaccggcccaaatcaacttcaaattctggtttttctgcagcctgcagttcatgatggcttcctcactattctcctacttttttgggatgaaatccagaatattatcacctgcgcttcctcaacaatcatatctgtcatcagctgaactaccatctctgactgatcatgtcaacgaggaggtggccaagctggacagaactgtgcgccgaatcaccgcggtgttggttgatgcagatgaaagggaaatcgctgacgagactatgaagctttggatctctgagctcaagcaagtgacatgggaagctgaggggatacttgaagattacagctatgagttgctccgcagcaccaccgtccaggaagagaaggtaacagactatacagactttcgaccaaacaatccctcttttcaacagaatatactagacaggataagcaaggttaggaaatttcttgatgagatctgtcgtgatcgtgtagatcttgggctaattgatcaggaaggattgtgtaggaaagaatctaggattagtaggtgcaccagttctttgcttgatccattggaggtctacggccgggaggatgagaaaaaattaataatatcttctttgcttgatgggtgccttacatttaagaagagaagattgaaggaacatgaatatgaaacttgtaaagctggtgctgtaaggcttatttctatagttgccatgggtggaatggggaagacaacactagctaggctcgtctataatgacgcaagggttcaaaatcactttgatatacaagcatgggtttgggtttcagaagtattcgatgaagtcagactaaccaaagcagcaatcgagtcggtcaccgctaaaccctgtgatctgactgagctagagccactccagaggcaattgcacgaggaggtcaagggtaagaagatattgcttgtgtttgacgatgtttggaatgaggacaccatcaaatgggagacgatgaaacggccattttctgctgttgctacagggagccacatgatcatcactactcgcaacgagaatgtctccacaattgtgcaggcgaagaaggtaattcatctaggtgggttgcaaaaagatgacagttgggcgttgttctgtaaattgtcattccctgacaatgcttgtagagaaacagagttgggaccaatcgggcggaaaatagtagaaaagagtgatggagtgccactagtcctgaagactctaggtgcaatgttatctttagacacaagcttggagttctggaattatgtactgacaagtgatctctgggagctgggccctggatgggaccacatccttccaattctgaaattgagctattacagtctgcctgcaattctgaagcgatgcttcacatttcttgctgcctttccgagaggtcacaaatttgacttagaggagctggtccatatgtggtgtgctttgggtttcattcaggaggacggtgtgaaaaggatggaagaaattgggcacttgtatgtaaatgaattggttcggagatcatttcttcaaaatttgcagttggctggttcacgggagaagtttgtcatagtgcacgacctcattcatgaccttgctaaatcaattgggggtaaagagatccttgtcaaaaagtgttgtggttcatctgttggtggttgcaatactagtgccaataatcatcttcgatatttagctgttcttgttggaacaacgcccttctactcagacaataaattggtgccttttactcttccggttgctggacactttcccctaagatcactgtcttttcagagtaaatggagaacttatctcagaagctgtgttagaaataacttgaggacgttctttcaggtgcttgttcagagccagtggtggtataaccttgaaggttgtctgctgcattcaccacacctgaagtatctacgaatcctggatgtatcatcaagtgatcagatcaagctgggtaaatcggtgggggttcttcatcatctccgctaccttgggatctgtcagagagaaattccggaggctatttgcaaaatgtacaagctgcagactctacgaaacacatacccttttgacacgatatctcttcccagaaatgtgtcggcactgtccaacctgcgtcaccttgttcttccgagagagttccctgtcacaataccatcaggaatccaccggctgaccaaacttcagtcactatcaacatttgcagtggccaattcagggagcggagctgccacgctggatgaaatcaaggacattaacactcttcaagggcagctctgcatcatggatctccagaacatcacacatgacagaatttgggaaccaaggagtgcaaacctgagcaagaaaaaattaactcgcttagaactagtgtggaatcctctgccttcctacaaaagcgtaccccatgatgaggttgtactggaatccctgcagcctcacaactacatccgacaactcgtaataagtggttttagaggattgaacttctgttcatggctaggagaccggtccttgtttagtttacaagaactggagctgtgcaagtgctactacactgatcatctaccaccacttggacaattgccaaacctgaagcagctcaagctgacgagcctgtggaaattgagaagcatagggcctgagttctacggcgattgcgaggccccatttcagtgtcttgagacattggtggtacagaacctggttgcatgggaggaatggtggctacctgaaaaccatccacattgtgtcttccctctccttcgtacgatcgacatcaggggctcacacaagcttgtgcgccttccactgtcaaatctccatgcccttgcagggatcaccgtatcatcgtgcagcaagttagagaccatagttgggctcaaggagcgctgtgaagtgactgctgggaacggtggattgcaagcaggtcagactaacgtgcttccctcccttcgaagggtaaagatcactgcttgcccttcactggaggagcctctgatatcgatgcttcgccggcagacggagatcggcttctcctactgggaacaaagccccagcacctctcccaccgacatcgctgattttggcaagactccatggaaagattctggcaaggacagtttgttgggatgctctgctctaggacagtttgttgggatgctgacagcaccctcttag</cdnaseq>

Protein Sequence

<aaseq>MERQTGSVLGTSLRREYPGLVKEYAGPGQRKRKRLAMSWGHYFG EKDHNGMTAGNRVKDEFWSFFTTQEEDMEELDKNIDNYCQARVPKIICQARVDAMKKY YGKGIKGKNASAIELNFEQYMTCKLDWINVDAWKCFCHWWTSDKYKEKRKRGQDARFA NEDYAQQQGGSLPFCTIQQNLVYQLGPENASGLDTYRVQMAGFKASLKGSGQIRSEKV KQRINIYCQVYHEERGEEHQPVSSELDGNVVYKAFGGLKHGRFAMGNGVFKKTEVLAA VKHKKSGISGSTNSYNAVVRENAQLRHEVTEQRGMIREQRGMIQEHRGMLKAVYEKLG MDIPEEVLSRWESQREDSELDVDCSEGSEEYEIEEEDEGQSPKFRSLVVDGPPPSGRH NLATLVGGAGAGAASAGKECNSNAASRGQYQNFHEIPPDDADFNNLTIYLKSASPAQI NFKFWFFCSLQFMMASSLFSYFFGMKSRILSPALPQQSYLSSAELPSLTDHVNEEVAK LDRTVRRITAVLVDADEREIADETMKLWISELKQVTWEAEGILEDYSYELLRSTTVQE EKVTDYTDFRPNNPSFQQNILDRISKVRKFLDEICRDRVDLGLIDQEGLCRKESRISR CTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHEYETCKAGAVRLISIVAM GGMGKTTLARLVYNDARVQNHFDIQAWVWVSEVFDEVRLTKAAIESVTAKPCDLTELE PLQRQLHEEVKGKKILLVFDDVWNEDTIKWETMKRPFSAVATGSHMIITTRNENVSTI VQAKKVIHLGGLQKDDSWALFCKLSFPDNACRETELGPIGRKIVEKSDGVPLVLKTLG AMLSLDTSLEFWNYVLTSDLWELGPGWDHILPILKLSYYSLPAILKRCFTFLAAFPRG HKFDLEELVHMWCALGFIQEDGVKRMEEIGHLYVNELVRRSFLQNLQLAGSREKFVIV HDLIHDLAKSIGGKEILVKKCCGSSVGGCNTSANNHLRYLAVLVGTTPFYSDNKLVPF TLPVAGHFPLRSLSFQSKWRTYLRSCVRNNLRTFFQVLVQSQWWYNLEGCLLHSPHLK YLRILDVSSSDQIKLGKSVGVLHHLRYLGICQREIPEAICKMYKLQTLRNTYPFDTIS LPRNVSALSNLRHLVLPREFPVTIPSGIHRLTKLQSLSTFAVANSGSGAATLDEIKDI NTLQGQLCIMDLQNITHDRIWEPRSANLSKKKLTRLELVWNPLPSYKSVPHDEVVLES LQPHNYIRQLVISGFRGLNFCSWLGDRSLFSLQELELCKCYYTDHLPPLGQLPNLKQL KLTSLWKLRSIGPEFYGDCEAPFQCLETLVVQNLVAWEEWWLPENHPHCVFPLLRTID IRGSHKLVRLPLSNLHALAGITVSSCSKLETIVGLKERCEVTAGNGGLQAGQTNVLPS LRRVKITACPSLEEPLISMLRRQTEIGFSYWEQSPSTSPTDIADFGKTPWKDSGKDSL LGCSALGQFVGMLTAPS</aaseq>

Gene Sequence

<dnaseqindica>1..186#362..718#801..923#1121..1435#1526..1594#2065..2126#2829..2941#3302..3366#4136..4186#4285..4326#4697..7786#8007..8069#atggaacgacaaacaggttctgtgcttggtacatctttaagacgagagtatcctgggttggttaaagaatatgcaggtcctggacaacgtaaaagaaagagattggccatgtcatggggtcactactttggggagaaggatcataatggcatgacagctggtaatagagtaaaagatgaattctgggtatgtgttttcctcaaaagattttactgtattgctagaaaaagtgttagaagttcaatctactatggtaccattccaagtattaggattgcatagctttctgcaatactcacatagctatgtagggacaccacataatatagtaaacacttatttcccccctttttttttccagtcattcttcactacccaagaagaagacatggaggagctggacaagaatattgacaactattgtcaagctagagttccaaagataatttgccaggcacgtgtagatgctatgaagaagtactatggtaaagggatcaaaggaaaaaatgccagcgccattgaactcaattttgagcagtacatgacatgcaaattagattggattaatgtggacgcttggaagtgcttttgtcactggtggacatcagataagtacaaggagaagcgcaaaagaggtcaagatgcacgttttgctaatgaagactatgctcaacagcagggaggatctcttccattctgcactatacaacaaaacctggtaaataaatgacaatagttcatatatagtatcaacacttttgattgtttttttttcatcacatgttgttcattgcttataggtgtatcaacttggaccagaaaatgcaagtggcttggatacctacagagttcaaatggctggctttaaagcctcactcaaagggtctggccaaatccgcagcgagaaagtcaaacaaagaattgtgagttggttcctgaatagttctcagcatcacattttatagatccttgctgcatttaagtgagagtcaagttaataagtcaagtcaagagtctttaagtagtaagccattagttgaattatttccttatcttaagcttagtgtgtgtagttcagtgatcctaccaagaaaccatacttactttctcatttttatagaatatttactgccaagtttatcacgaagaacgtggtgaggagcatcaacctgtgagcagtgagttagatgggaatgtggtatataaagcttttggtggactgaaacatggacggtttgcaatgggcaacggagttttcaagaaaactgaagttcttgctgctgttaaacataagaaatctggaatatctggatctacgaattcttacaatgctgtagtgcgtgagaatgcacaacttcgccatgaagtgactgaacagcgtggaatgatacgtgaacagcgtggaatgatacaagaacatcgtggaatgctaaaggtaataactactaaattaatctctgattcatttattttttttcccctcacagaaaaatccaattagcaaatttaacttgcatgcctataggcagtatatgagaagcttggaatggacatacctgaggaggtactttcaaggtgggagtcacaaagagaggtacatttgctttgacaaatgtataatttgttgtttcaatgatttattgtagtagagcgtgaaactgatgtctttactgttagtgaacaatggttgctcacaatgcatggatggatgattgaatgctaatataaagtctgcaagatacatttcatttatttatttccagtattttcatacatagcatggcatgttttctaaatggtttacctagcatacatatatactgcaatatctccatttttcttcaatttgttgtctagcatgccctcttttgtatccacaagactctggaattaagttcttttgccggcacaatgttcccttaacaaaaccagtccaatctccaattattaatcttttagcatgcttcaatatgactatggcctataagcaatattacttatgctttaccatatgtaccgatgactaattgtttgttttctctcatctgcttatttcatttaaaggattctgaattagatgtggactgttctgaggggtctgaagagtatgaaatagaggaagaagagtgtgaaacagaggatgaagaatatagaacataggaagaagaggaagaagagtgtgaaacagaggaagaagaatacagaacataggaagagtcatacatgtcaataggattgtgtttttgcttctagtgaaaggccactgggccgtgatatctacggaattactattcacttcaacattgttgtttgtcttatacaatattttgttgagacctgtacacacttatggatgtgggtgcgcatgaatgggtgttaaattatgatatgtttttttttacttgaaaattgatggtggacatgcatgatcttgtgccatgctactttcttacatctattaccgttgtagattaagtattgacgtattaattatacacccatttgtggatctgttttgtggtggcaacccagtcaccaaaggtattttctaacagccaaaatcagtcaaagaaataatgttttgtgactgctattgtcttcacgaaaaacttttccttacagctaaggaacgactgtcgggaaaaatgaccaaaacaggaaaaatgatgggattgccttttggtgactgctagacagtcacatggtgacttgtgacagctttccgtcacagaacattagatttcgtgaccaaccaagtgtgacgggtgtttcgtgacggcgcgttctcacgaaaaatcttagtgacagtcttatgccattcgttacagtgaggggcagtcaccaaaattccgttctcttgtagtggatgggccgccgccctccggccgacacaacctcgccaccctcgtcggcggcgccggcgccggcgccgcctccgccggtgagcaccccccccccccccaaacacttccgcagtttgttcatcttgtcgcaaatcgttgacttggtccgccgggcaggttcctgtggtcggtgtgcgccacgggagttcggtggattaaaccacttggggttcttctgctcggttgttttgacggctagttcaactgctgcggctaatcaagcccttgttgattgagctcagtgctcaccaagcactgttttttaatctgtttttcatattctggaatcgcagttctccttcttcgttttcgtaacgagaaaggattagtcaagtttggggaaatatatactactatctggattattcttgactattgagttacttggattaatgcagggaaggaatgcaacagcaatgcagcatcacggggacagtaccagaatttccatgaaattccaccggtaacaataattttcagtcaagatttttcatgaattcgaactacttgcttgagttttcctgttgctgatattcgactggcaccatatcgcgcaagaaccatgttatatatggagatggattctaatagctcgagtggacgtccatccgtttattacatgccaactagatggttacaaaaaattgacaagataaatcaatatgtaatatatcactccacaaacatgcaagttcaaattcaacttctacaagttgtagaatttgaattttaacttgcatgtttgtggagtgatatattacatattgatctatcttgttcatattttttcaatttttttcataattatttaaatgatatgcaataaacgggtagacatccactcaagttgttaaaacagtttccctgttatatatattctctggatcattcttgactcttgagtgagttggttgaatcagcggaggacggtaactatattgcagggcagttgtagcgtagtactaacacctcttgtttaatttcagttcagttaagatttttctggaatgctaactacttacttgaatttttactgttgctggaactttgtatattccacctacgtaacagggcacaagaagcatgttatatattatctacaaaagcccaatgcaactgtagagaattcatttacctggtctaacatgtacatgcaaatttatttgtgattaacatcactgcttctgcataaaattgttctaggtgctcgtacatagattaaactgtttcaggatgatgctgattttaataaccttacaatttacttgaagtcagcatcaccggtatgtactagctgctccttatgactttcctagtagccgcttggtggtcactggtcagcatcactaacatgtattagttggtccttatgacttttcaggcccaaatcaacttcaaattctggtttttctgcagcctgcaggtaaccacccatttctcacttcctgccactttttttttctgctgaaaggggataattccaaccatggaaataaaattcgatctaaaacaacaccgatgctttatatttgcaatttccaggaacattatatggccttatcctgtattcctgtactcctgcagttttgccaccgtgcaatagttttttacagactcataggagcttgttgaatattgcaaaaaatatattttagtcgcatgcttaggggcaacaccgtaaaagctcattccttttggattggagcaaggccaggcattgacttgacccaaacgccattttccttatatcagtttcttgatctgaagattatgttttagtatttctctttgagttcatgatggcttcctcactattctcctacttttttgggatgaaatccagaatattatcacctgcgcttcctcaacaatcatatctgtcatcagctgaactaccatctctgactgatcatgtcaacgaggaggtggccaagctggacagaactgtgcgccgaatcaccgcggtgttggttgatgcagatgaaagggaaatcgctgacgagactatgaagctttggatctctgagctcaagcaagtgacatgggaagctgaggggatacttgaagattacagctatgagttgctccgcagcaccaccgtccaggaagagaaggtaacagactatacagactttcgaccaaacaatccctcttttcaacagaatatactagacaggataagcaaggttaggaaatttcttgatgagatctgtcgtgatcgtgtagatcttgggctaattgatcaggaaggattgtgtaggaaagaatctaggattagtaggtgcaccagttctttgcttgatccattggaggtctacggccgggaggatgagaaaaaattaataatatcttctttgcttgatgggtgccttacatttaagaagagaagattgaaggaacatgaatatgaaacttgtaaagctggtgctgtaaggcttatttctatagttgccatgggtggaatggggaagacaacactagctaggctcgtctataatgacgcaagggttcaaaatcactttgatatacaagcatgggtttgggtttcagaagtattcgatgaagtcagactaaccaaagcagcaatcgagtcggtcaccgctaaaccctgtgatctgactgagctagagccactccagaggcaattgcacgaggaggtcaagggtaagaagatattgcttgtgtttgacgatgtttggaatgaggacaccatcaaatgggagacgatgaaacggccattttctgctgttgctacagggagccacatgatcatcactactcgcaacgagaatgtctccacaattgtgcaggcgaagaaggtaattcatctaggtgggttgcaaaaagatgacagttgggcgttgttctgtaaattgtcattccctgacaatgcttgtagagaaacagagttgggaccaatcgggcggaaaatagtagaaaagagtgatggagtgccactagtcctgaagactctaggtgcaatgttatctttagacacaagcttggagttctggaattatgtactgacaagtgatctctgggagctgggccctggatgggaccacatccttccaattctgaaattgagctattacagtctgcctgcaattctgaagcgatgcttcacatttcttgctgcctttccgagaggtcacaaatttgacttagaggagctggtccatatgtggtgtgctttgggtttcattcaggaggacggtgtgaaaaggatggaagaaattgggcacttgtatgtaaatgaattggttcggagatcatttcttcaaaatttgcagttggctggttcacgggagaagtttgtcatagtgcacgacctcattcatgaccttgctaaatcaattgggggtaaagagatccttgtcaaaaagtgttgtggttcatctgttggtggttgcaatactagtgccaataatcatcttcgatatttagctgttcttgttggaacaacgcccttctactcagacaataaattggtgccttttactcttccggttgctggacactttcccctaagatcactgtcttttcagagtaaatggagaacttatctcagaagctgtgttagaaataacttgaggacgttctttcaggtgcttgttcagagccagtggtggtataaccttgaaggttgtctgctgcattcaccacacctgaagtatctacgaatcctggatgtatcatcaagtgatcagatcaagctgggtaaatcggtgggggttcttcatcatctccgctaccttgggatctgtcagagagaaattccggaggctatttgcaaaatgtacaagctgcagactctacgaaacacatacccttttgacacgatatctcttcccagaaatgtgtcggcactgtccaacctgcgtcaccttgttcttccgagagagttccctgtcacaataccatcaggaatccaccggctgaccaaacttcagtcactatcaacatttgcagtggccaattcagggagcggagctgccacgctggatgaaatcaaggacattaacactcttcaagggcagctctgcatcatggatctccagaacatcacacatgacagaatttgggaaccaaggagtgcaaacctgagcaagaaaaaattaactcgcttagaactagtgtggaatcctctgccttcctacaaaagcgtaccccatgatgaggttgtactggaatccctgcagcctcacaactacatccgacaactcgtaataagtggttttagaggattgaacttctgttcatggctaggagaccggtccttgtttagtttacaagaactggagctgtgcaagtgctactacactgatcatctaccaccacttggacaattgccaaacctgaagcagctcaagctgacgagcctgtggaaattgagaagcatagggcctgagttctacggcgattgcgaggccccatttcagtgtcttgagacattggtggtacagaacctggttgcatgggaggaatggtggctacctgaaaaccatccacattgtgtcttccctctccttcgtacgatcgacatcaggggctcacacaagcttgtgcgccttccactgtcaaatctccatgcccttgcagggatcaccgtatcatcgtgcagcaagttagagaccatagttgggctcaaggagcgctgtgaagtgactgctgggaacggtggattgcaagcaggtcagactaacgtgcttccctcccttcgaagggtaaagatcactgcttgcccttcactggaggagcctctgatatcgatgcttcgccggcagacggagatcggcttctcctactgggaacaaagccccagcacctctcccaccgacatcgctgattttggcaagactccatggaaagattctggcaaggtatagtacctcatgtggatgtggatttctgtttggtaccagatgctcctcttcatggcacacaccatcctatgcatgtaatgtaggaataagtcttggctggttggtcttggtcttgtggtgccttttttcctgtttttcagctttctaggacagcatctctactttcagtttggatgctctaggacagttaggacagcagtttgttgagatgctctaggacagtttgttgggatgctctgctctaggacagtttgttgggatgctgacagcaccctcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0314100, RefSeq:Os09g0314100