Os09g0319800

From RiceWiki
Revision as of 20:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0319800

Description

Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein

Version

NM_001069388.1 GI:115478515 GeneID:4346705

Length

4758 bp

Definition

Oryza sativa Japonica Group Os09g0319800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9662266..9667023

Sequence Coding Region

9662303..9662429,9665387..9665466,9665933..9666233,9666351..9666534,9666633..9666855

Expression

GEO Profiles:Os09g0319800

Genome Context

<gbrowseImage1> name=NC_008402:9662266..9667023 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9662266..9667023 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatactaatttgtgcaaatgcaccgccgcacttggcgttgctcgaccgccggcggtggtccccggcgtgggatcgccggcgaccagatcatcatacgcgtatgcacgctccgcgtccacgtgataaagagcaatcaaagggaatagtatattgcaaagccaaagaaacacaagaaacagttgacaggaggagcggtggaaaagacgaaccgcgggacatggaagaaatggtcaataccatcagagtaatgctaaggacaatgggcgatggggagataagtgcttctgcctatgacaccgcgtgggtcgcacttgtgaagaatcataacggcagcgacagcccacaattcccctcgaccattgattggatctctcacaatcagctgccagatggttcatggggtgatgacttgtgctttctagttcatgataggctcctcaacaccctagcttgtgtgattgcgctgatggagtggaaggttcatggtgacaagcgtgagaaaggtttgtcgtttattcgggaaaatatatggaggctggcccaagaggaagaggcatggatgccagttggttttgagatcaccttcccctcacttttagagatagccaaggacttggctcttgacatcccttatgatgaccctgctttgcacaagatatatgcccaaagggagctaaagcttaagaagatcccaagagaaatacttcactccctaccaacaagtttgcttcttagcatagagggactgcgaggcttggactggaagaggctcctcaagctccaactttcagatggatccttcctatcctcacccgctgcaacggcctatgttttgatgcaaacgggcgacaagaaatgtctcgagttccttgatggaattgttagcaaattccatgggggaggtaaataa</cdnaseq>

Protein Sequence

<aaseq>MQILICANAPPHLALLDRRRWSPAWDRRRPDHHTRMHAPRPRDK EQSKGIVYCKAKETQETVDRRSGGKDEPRDMEEMVNTIRVMLRTMGDGEISASAYDTA WVALVKNHNGSDSPQFPSTIDWISHNQLPDGSWGDDLCFLVHDRLLNTLACVIALMEW KVHGDKREKGLSFIRENIWRLAQEEEAWMPVGFEITFPSLLEIAKDLALDIPYDDPAL HKIYAQRELKLKKIPREILHSLPTSLLLSIEGLRGLDWKRLLKLQLSDGSFLSSPAAT AYVLMQTGDKKCLEFLDGIVSKFHGGGK</aaseq>

Gene Sequence

<dnaseqindica>38..164#3122..3201#3668..3968#4086..4269#4368..4590#aaacttacgaccatacggactttctcggatattgcccatgcagatactaatttgtgcaaatgcaccgccgcacttggcgttgctcgaccgccggcggtggtccccggcgtgggatcgccggcgaccagatcatcatacgcgtatgcacgctccgcgtccacgtggtaaccaaaacatccttgcaaacttttaaggcttggcactacgttttctaaaaggatttttacttatgtttttttttgtaagaattcgattttagaattactaaaaagaagcccgttcgttgcaacggatgaaaatcattttaatcttattatttttatatggtttagttaagatgaaatttactgtgggaattcacttggatacatatattttttaaaaatcaccagctgcagttaggagtccattcgtctaaggttagtatgcgagttttcttatacgactccttctgtatttctaaaagcgaatgaatttaaaaaccgatccatacacggatgacataccaaagtaccggcagaaacatttttaatttttataatagtagagatagagattcgtataaggtattttcttcaccgctaccattgtccaatcttatttatcttgattgcaaagtgaacgactgaaattcaatctatagcaaagtttgtatcaaaaatgtttatacatgggtcgccaatttaacccctctgcatccgacaacataccatgcttatcagttgtgatgccccgcaatcttaactaattaaaaaatgggatcacttttacatttatcgataaattttatcctaaaaatttgacagatataattatagtataatcatgatgtaattacattgtaacttatatgtaacttgcacgtaagttccaaaaatctttccataacatattattttcatgaaatggaggtcgtgggaacaaattctctcacatatatgcgtgcagtgatttttttccttcttcacttacacaaatattaaaacaaatcaaacggttcaaaattatgtgaaagttacatgtaaattatagtgtaattacatataagttacagtataattataatataattgtactgtggttacatctattaattttttgagagaaaatttatcgataaatatatagcaaaattgttcgtcacacatctttttcgtccgtctcatcgtgatcgcgcacgcattatcagactttcgtccgtcctctgctaacttgcagccggcccaatccacgcgatccatccccgtccacggtagggtggttttcagcccagtcaacgcgagcaaattcggaatttttgccgcacggaaagaaaacaaaataaaagaaccgcacaggaaaatcacaggccgccttcctcctgcaatccggtggttttaatgtgccatcccgtagatcccacttaaataatttgatatttgccaattgtatttatgcaatagatatatcttgcctgatctattaacccttgatttaaggcgaaagatttcttgatctgttttttaggtctagggttcgtctaggtgttctggattttgggacttttttaggtattttcttgtggtgcttgctatgttttggactgattgtgattggggctatgctctaacatgagaatccaactcgtcctcccttgacgcactccccactcccgctccccggtaagattcccgccgattcacaagtgccactcgctaactataaggcacaggcgccacttcatcttgatcgtgcaacagtcatgctgttccaagttgccgaatcagcagtcctaccgactccagatggatccatggagtctgaatccatggtggcagtgcagaagtctgaaccgttctggacatgccacgtagcaaagcggataaatgatgatgttgggtcgtcatggaacctactaagcagggatgaatctagtaggtaggctccatcaggctctagcctatcctctgatttttttttaaaaaaagaatatcccatactcatagcaaagcaaaatcagtcatggcaacgttgagtggtcggggaagaacagtaaggacgctgattggggagatggggacgacatgggacataacacaagctcactccaacagcagttgggccatctgttttagcccaatcctaatagctcgttcggctagggctggtactaggcggcaggacttggctcggccatggcttgcgaccacgagttgtggtggcggccggcggggaaaccacgcaggcaggtgggctggtggggcggagagcgccacgtaggacgcgtgtagcggcagccgacggcgacacgggcagctgatgactgaatatatttagttttatcagtaattttgacaagctggcctcctctctccagggggacctccccccttcccttctcctcctctagtacaacgtgtggtggcggccggcgcagtcgccggatctcgctggcctcccctctcctgggggacctccccctccttcagtgcagcgtatgggcaaggtggcagccagcggaagtataggtgccattgttaaccggcactaataagattgaggtataggcgccgatcaataagtgtcggttgggaaaccagcacctatagccagttcccaatcgataactatagaggtttctgtactagtggttgatgcttgtaaatgatttgtgtgtatggaaaagtggtaattgggtagtagattaattctaacttgaggagtgacgcaattgtgtatcgtgccaaaacttatgattcggtttctgtgatttgtgatgttttcattcattgattcattcaaggtagctctaggcattctgggtgtagtaggaagtcaatttagttcattggaaaattgattagatgagacggctctttaatgtttgtttttgttcataaagggtgtatgcagtcatgcaattcgcactacatgctctaccactatataaatggagtttaattaactaaatcgttttaacgaggacgacattgtctttaacaacactcatcccttgttttgtctcagtagaagatataccaagggatagtgaatccgatcaatatagctagtggtttcgtttacttaattttctaaactactattggtattctaacatttttgtctctatatatatacgtagataaagagcaatcaaagggaatagtatattgcaaagccaaagaaacacaagaaacagttgacaggaggagcggtggaaaagtaatatattaatgttgcacagactacttttcccatctttttttcctttacagctctatgttatacttcctttctgttttgtaataggattagtgcaggcgtacacaaatgttaatggtatttcttgattcttttttcagttctcaacttaatattcttgattataaaaaatgaaggttggttgatgtactccctccgtcccaaaaaaacttaacctagagctaactagtctagattcattatcctaggaggggttggttgagttttttttggccgatggagtaggctggattatattgttttctattattaaaaataaatatagacccttggatttttttcatgaagtttagaacattaacatagttacctatacatatatttgatcattaattgtttgttctaattatatagtcataaaaatatagaaaattaagaaaaagaaatgatttgcatatttatccaggacgaaccgcgggacatggaagaaatggtcaataccatcagagtaatgctaaggacaatgggcgatggggagataagtgcttctgcctatgacaccgcgtgggtcgcacttgtgaagaatcataacggcagcgacagcccacaattcccctcgaccattgattggatctctcacaatcagctgccagatggttcatggggtgatgacttgtgctttctagttcatgataggctcctcaacaccctagcttgtgtgattgcgctgatggagtggaaggttcatggtgacaagcgtgagaaaggtaccatagtgttggcagatcaatctgtttacgatgagaggctttttgaggttttcggtgtaactgtattgtgatcttaattttcagagagtttaagactgttccatttgattttaggtttgtcgtttattcgggaaaatatatggaggctggcccaagaggaagaggcatggatgccagttggttttgagatcaccttcccctcacttttagagatagccaaggacttggctcttgacatcccttatgatgaccctgctttgcacaagatatatgcccaaagggagctaaagcttaagaagtaatctgcatacctgtttctaatagggaaaggctccaatttattcatatgtatttaatttacacacacacattaataattttgttacatttgcgtaggatcccaagagaaatacttcactccctaccaacaagtttgcttcttagcatagagggactgcgaggcttggactggaagaggctcctcaagctccaactttcagatggatccttcctatcctcacccgctgcaacggcctatgttttgatgcaaacgggcgacaagaaatgtctcgagttccttgatggaattgttagcaaattccatgggggaggtaaataatgatctttcaattataaataaattctcattcgagacttcatttaatttctagttgaatagaacctatttgatgcaaagttcgtttctgtacagttccagaattgaaaaaaatggatatcatttttgatagccgtaacattattcaatcggatttgtccagatatgcat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0319800, RefSeq:Os09g0319800