Os05g0472300

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0472300| Description = Ribonuclease P subunit family protein| Version = NM_001062350.1 GI:115464430 GeneID:4339079| Length = 5305 bp| Defi...")
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Gene Name

Os05g0472300

Description

Ribonuclease P subunit family protein

Version

NM_001062350.1 GI:115464430 GeneID:4339079

Length

5305 bp

Definition

Oryza sativa Japonica Group Os05g0472300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23241944..23247248

Sequence Coding Region

23242115..23242251,23242661..23242765,23242860..23242918,23243576..23243644,23243848..23244110
,23244203..23244276,23244355..23244387,23244466..23244676

Expression

GEO Profiles:Os05g0472300

Genome Context

<gbrowseImage1> name=NC_008398:23241944..23247248 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23241944..23247248 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaactatttccgatcagaagaaacggaccttagaagcccttcaacaacgttatgctgctgcaaaagctaagaaactgcaagacaagcctaggtgtcagacaaggaataaagatagtgcgcccaagcccaatcttgatgcatcaaggaaaggcaaagctccagatttcattccatctcgaacttctgctccgtttccttcaaaaaaaggtctagcaatctccagttcttctgcttcctcaggtggagaaaccaatcctgtatactctgaactttcatttgctccacatgataatttgctccaaagaagcatttcggatttggacagtatggatgttgtgcacaatgttgtttatgacataattcagaaaggtggagatgctggaaaaattaccaagggagccaaaaagttaaagctggaaaaagggattctgctggataactatgttcacaggggtcctagattagttgatgcacaggcaaaatctttgttaattcattcaaagcgatcaaaaaggcacatgtcacttaagcaacataagaaatgtgggtcatttgatttacctgagacactccgcaagtttgacctctacaagccaatgcatgagatgtggaaagagtatatcacagagcttaccaaaagcacaccgaaaaagcagttatctgaaaccctcctctcagcagatcttcatggggctcttgtaatagtggcagaatgcaaatcagcctcttcttatcaaggcgtatgcggcatcatgattcgcgatactgcagagacttttggaatcatatcagatgacaatcgcttccgagttgtgccaaaagctgggtcagttttcatcctccaagcagactgttggaaggtcacgctgatcggtgacaaactgtcacccagggagaagctgaaggagaaccagcgtcagcagcgagtgcaggcacagatcagatag</cdnaseq>

Protein Sequence

<aaseq>MSTISDQKKRTLEALQQRYAAAKAKKLQDKPRCQTRNKDSAPKP NLDASRKGKAPDFIPSRTSAPFPSKKGLAISSSSASSGGETNPVYSELSFAPHDNLLQ RSISDLDSMDVVHNVVYDIIQKGGDAGKITKGAKKLKLEKGILLDNYVHRGPRLVDAQ AKSLLIHSKRSKRHMSLKQHKKCGSFDLPETLRKFDLYKPMHEMWKEYITELTKSTPK KQLSETLLSADLHGALVIVAECKSASSYQGVCGIMIRDTAETFGIISDDNRFRVVPKA GSVFILQADCWKVTLIGDKLSPREKLKENQRQQRVQAQIR</aaseq>

Gene Sequence

<dnaseqindica>4998..5134#4484..4588#4331..4389#3605..3673#3139..3401#2973..3046#2862..2894#2573..2783#gctggttgcctcctccgcacgcgcaacggcgcgaccggcgactctcctcgccgccggtcaccggtcgcctggcccgcctctcgcgccccgccagccaccgcatcggcgcagatcgacggacgccgagacgcgcagccgcagtcgcgcagaggcgccgagtgcctgagggctcagccagccgccgaccgccgcggccgcctggcccccctgcccgtctcgtcttctccagtctcctccaatccttcgtggcaggtctccaaactccggctccccgctgcggcgctccacctccgactccgattggcgattggacaacactgaaggtcagtgactctgtgacgtaactcaataattttgcctcactgcttattgtcatggctaattagttagctcatagcttaggttgccaatttgtgatttgtgaatggctgaatgggaataaatcgctgctgttattgtaggattggaattagcttattgggtgaaacataaagaggattggggattggtattgacctattgtaatatttgctcattttgaacttgcttgttaaattagtcggctattgatgttataagatactattgttatttatgtgtcgccttttattcaaatttgtacttgtatatgagatttgccgtgtttaaaaaatttggtaagtgatttgaactattgaagtcggactagccaagaaaaattcctagctacaccaatagcccacttcaagatagcaattagtcttggcctggggttcggcaaaatcctgggaccagggcggagggctcagtagggcgaggtgtggcgctcgccgtacctcgtgccgcctgctgaccacccccccttcccccttcctcgtactcctccgcacagagcaacaaccgggtcagagagaatggcgacgcagcatcgtgagaagacgagcgacggccgagacgtgctgtggacgcgtccgcgtgtgccagtgctggtcctcacactgatagctagtaggtccattaggcttgtttagtgtaaatgcggcctgtcttgttttgtctcttgaatcatctcctccaccctcccccaatccatcaatccccttccccaatccccatcagtggacggcggctgctgcggtgctcgccacgcgctggagggctgggtgaggtgtggagggcgtggctgccaggcttccggcctccagggcgcaaagctgcggctgcggcatcctctccaaccaggcggcagcgcgaccagccgccagggaccaggggggcctgcgagcagggtgggacgaagggcacaacatctgtgcaggcgtgcagcaccaagcagtgacagcaagcaagccaactagccaagtatccatcactccatcaacagattctacatatgtgaacattaatcaatctttggtactagttgttttgtagattccacatatatatctatctattcttagtactgtagttcctatatgtgatgtgttgttgaaaacatgaatcttgagaagatgagatattttctgagaacctattcttctatctacacttgtttgcaaatggatgatgaatcatgaacttgtgagtagttcttgtttgccatgcttaatgtagacttattgagatgatattgtgtcgtataatgacgtgcattgagatttttcgttctgtgctaacttccgtggtaattcataggccacacctaaatttttttccttcctccggcactggtggtaatatttgctcattttgaacttgcttgttaaattagttggctatgatgttataagatactattgttatatctgtgacgccttttattcaaatttgtacttgtatatgggatttgcagtgtttagaaattttgattagtgatgtgaacttttgaagtcgaactagccaacgaaaaattcctagctactccaatagcccacttcaagatagcaattagtgttggcccagggctcggcaaaatcctgggtccgccagtgagcctcctagctcttcctcagggaggtctgcaccgagggctgcctcggcttggaggtctcttcttgccaagctgctgcaagctggcaaggtaagttcctttgcagaatcaatgtgccaccggagggagggggaatgaggggcttggggctggccagtcacagggcatagggaggtctgcggcctgctggccagggggagaggatctcaccggcatccagccctgctggagagagggacgagagaacttctggagtgggatgatggaaagagaggaagaaggtcataggggcaatttaatcaaccaatttagcttcgtagtggcatgtttcaaaataattccactttggagtggcatatttctaagtccaaactttcaagtggcatgtatcttaagtgcaaaccttgcattctatgcatcaatttatttcctatcatcgtctagagtctgctgcttgttacttatttttgttggtttgcagaattatcaaacttgtggtatggaaggcgattcctttcttatatgttcatttgccttgtgaactgagattcctctcattcgtgttgaactgttgattaaccacagatctttcttataggcatgtcaactatttccgatcagaagaaacggaccttagaagcccttcaacaacgttatgctgctgcaaaagctaagaaactgcaagacaagcctaggtgtcagacaaggaataaagatagtgcgcccaagcccaatcttgatgcatcaaggaaaggcaaagctccagatttcattccatctcgaacttctgctccgtttccttcaaaaaaaggtttaatgttgcccatcattcttttgatgcagtttttttttttctggccattttttctaacactgcttctgatctcaggtctagcaatctccagttcttctgcttcctcaggtgccttcttaggctctaacatacatagatctgtgagttctgtgtgtggctgtttgacatgtacatttaactttgtaggtggagaaaccaatcctgtatactctgaactttcatttgctccacatgataatttgctccaaagaagcatttcggtacctattctccgtgtgtgggtttcaaaaattaaatttaggcatgaggaaataacttatgatatttattgtagtgtacttcattgttgtaggatttggacagtatggatgttgtgcacaatgttgtttatgacataattcagaaaggtggagatgctggaaaaattaccaagggagccaaaaagttaaagctggaaaaagggattctgctggataactatgttcacaggggtcctagattagttgatgcacaggcaaaatctttgttaattcattcaaagcgatcaaaaaggcacatgtcacttaagcaacataagaaatgtgggtcatttgatttacctgagacactccgcaagtaagtcttgttccgaataagtgcatagattgactccttttcttgtcctcagtcataatttccttatcatggttttcttttgataaaatggaatccctttagggtaatgattaaactacactttacatgtttgattgaatcttcacataatatagtacctttggacattatgtactttttacatatgtggcttgcccttgcaggtttgacctctacaagccaatgcatgagatgtggaaagagtatatcacagagcttaccaaaagcacaccgtatggattccaccatctttttggttatgttattactgttctcaccttctggttctttacttattgcttggggcataaagtttattctgttatatactaaaactgcagtaaaagcgaaaaaacattaagtgcacaaatgttgggttctgctgctaccagtctctcgatgttagcttctaacctcactgacctttggctgcttgtgctttctttgatagaattagctgataggtttactaatttgattctacccttttgaactcaagtttttcaataagaactatatgctataataaaatttagtccacccaaactgcttatgtacagaaacttccttgactgtagggactaaatcttttggtatgcatatcaaattattgctgaaatcaggttcattttatggaagtggactacacaaagttctcagagattaaatgaatataccatttttagctctgaattattaacacattcaaagagttggataaatcaacaaatgcaataatgatttcaacagcttagataaaacaatagagtaagggatcaattcctcctttttccagaacttcgttatgacccttttattgtgacctttctatgccatatatgagttatttaatcacaaaaaagtatttatgtgtactgccttttctgcaggaaaaagcagttatctgaaaccctcctctcagcagatcttcatggggctcttgtaataggtgatttatatgcttaagatgagctgcgtattcaattgctttcttgtttctgttagttttatcatcatttcttatggttttgtggcttttgcagtggcagaatgcaaatcagcctcttcttatcaaggcgtatgcggcatcatgattcgcgatactgcagagacttttggaatcatatcagatgacaatcgcttccgaggtaattcttcaaattcctggtgcaatatttaaccgcgtatataggatgaatgctattttcctcaagtcagtgtctgtttcaatcatataaatacggttacatagttcttacgcagctcttttcctccatattatgctcattgagctgtcaactgaaaataatgtgagatagcataataaatttacagtaggaaggtgctctgttatgaaagcttatgtattgctctgagggctacgcacttgaaatttccatccagcaacctgaacgcttcttgctcgagacacctgaaatactcttgtcagtcagtccatcggctggtgttatcaatctctgtttgcatggagacattcgattctatagatattatctgcatatctttgtggcttaattacaaagtttgaacctgcagttgtgccaaaagctgggtcagttttcatcctccaagcagactgttggaaggtcacgctgatcggtgacaaactgtcacccagggagaagctgaaggagaaccagcgtcagcagcgagtgcaggcacagatcagatagagtttttcatcctttgtctgttgtaattttggttgttttttctcccccagaaacatgtacagggtttagttgtttaggtgttgttactgaagtttaatggtaatctccctcttcacaccttaagcaagtatcacttgaatacaactacggctctaccttatcactgcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0472300, RefSeq:Os05g0472300