Os09g0337500

From RiceWiki
Revision as of 20:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0337500

Description

Conserved hypothetical protein

Version

NM_001188857.1 GI:297726844 GeneID:9269728

Length

6480 bp

Definition

Oryza sativa Japonica Group Os09g0337500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10825970..10832449

Sequence Coding Region

10827238..10827360,10827490..10827737,10827818..10827938,10830200..10830262

Expression

GEO Profiles:Os09g0337500

Genome Context

<gbrowseImage1> name=NC_008402:10825970..10832449 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10825970..10832449 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagttccaaatcaaaccgggatttaatattgtcctttttcttcccatccagatttaacaaggtcaaaatggtttcccaagttcgtccatccgtgaaccagatggagacttcggatgatgctgctcgacaagtcataaccaatactaggaatgagggacggatgggaccaaccggaaacacaggtctcaaacgtaggaaaggtaggggtctcaccattaatggaacacttgcaaaactgagagcaaggggtgtgccactagacattcaatttgctgcacagtttggaaaagtctatggtaggcacgcaagtgtctttaaaagtgaggtcactgtctgtgtgcgacaagaggtcccccttaaggtgaagaagtggaaagtcattgaaaaagcttttcctggaaccatgtcatcaatttggaatttattgaaggcaaaattccctgagatctcaatggcagactaccaatgtgtaatgacacaagttgagcgaaagtacaatgtaagacgccacaaactgtacaagacctattgcacaacaaaaacagtgtcctag</cdnaseq>

Protein Sequence

<aaseq>MSSKSNRDLILSFFFPSRFNKVKMVSQVRPSVNQMETSDDAARQ VITNTRNEGRMGPTGNTGLKRRKGRGLTINGTLAKLRARGVPLDIQFAAQFGKVYGRH ASVFKSEVTVCVRQEVPLKVKKWKVIEKAFPGTMSSIWNLLKAKFPEISMADYQCVMT QVERKYNVRRHKLYKTYCTTKTVS</aaseq>

Gene Sequence

<dnaseqindica>5090..5212#4713..4960#4512..4632#2188..2250#agatgtgtccagatccctatcctctttatctgaaaaaagctattatccaacatggtcagctgttcaaggagtatggattatatatctgaccgtgacttacagagttgcaacagggcccaatacttagtagtacatgctagtttctactaatcagtcaaataggcctcaatatggattagttacatttcataatctgcaagaaattaatttacttagtatattgtattaaacataggcaattaatgtcctcaatatcaaagaattgtatttcaggccaacatatttttgctgtgtttgtgtaaatttgcagtaacatgaatatagtttataaattaactgtcatctacatcttcttcagtttggatgtcactttcatcatctgtatctgtatactcagcgccatcactttcagaatcttcctcttcttcttcttcctcttcaaacagatcatcttcagaatgtgttactggttctgcttcaatgggttcacattcgactccatctttactgagaaccgtagggaagtcaccatcatcaattgtagtgtaattcaatgcagccgtgatatgctcattctcttggcatgcttcagaactagacttatttgataaagttggatcattttcttcttcttcttctgtaggaggaaagtcatacaaatcacgtggcttcgtcttgactacaacaaaccatttagggtctctagtatctttgacataatatacttgctcagcttgtgttgccaaaatatatggctcatcaattggcactgtacgggaagtattaattaaggtaaatctatgcttgtcctcttttactccccttttagtgtgtacatcccaccattcacatttaaacaatatgacactaaaagtaccatatgttagcttgataatatctgtcaagacaccaaaatagtctttgcttccactggcttcatcacctttaacaaagactacactgttttgtgattgaaccaacttgtctcggtccctggtgttaaatctccatccattaatcatataacttgtgtaatgggttactcgagcatcaggacctcttgctagagcaaacaactcttctgatatatctggagatcctttggaatgtttctcaaatatctggaagaatgtttatacaggttacaaatagttgtaaaatgtaaaaaaaatacttttattatggcgtgtacatacatgattcttgaaccatacaaaaaattctttgtcatggcgcttttccacacctttactgttctggatgctaagttggtctttgtaaatgctgcaagacatgtacatgtacgttaaattttgacagcatttacatattagaaaatgagagtaagtagtagttgtttactttgcgtattctgatatttcttcataattctttagaacatatatccgagctttctccaactcattcatatccatctggcagtatttgttaccaaggagtggcctgccaacagtaccaaatatctgaaattttgtactgctgttgtcactctgcacgtcctcgattcgacttggtcgattgattcttgtttcaactccttgaaggtacatagaacaaaaatttacacattcttgcaaaatattcttgtttcaactccttgcaggattcttgtttgatccttcagggcgagctttgttttttacaaaagacttcaaccttcgcaaaaacctttcaatgggatacatccaccgatactggacaggtccaccagcaatagcttcctgggctaaatggattggtagatgcaacattacatcaaagaatgaaggggggaaaatcatctctaacttacagagggtaacagcaattgatgatgcaagcttcttgagaatttcagtatctaatttcttggaacaaatttctctaaaaaagctacatagctcaattatagcctcacaaacatcagcaggcagaactccacgaatagaaaatggaaggtatctgtgtaaaaatacatgacaatcatgacacttcatccctgatattttagcttttgttgcatccacatagtgtgaaatttttgaagagtatccatctggcacttttatttctctaaggaactcacaaaatgctttcttctcagctagtgtcattgtatagcatgcaggacgaaataagatcttcccatcaccagttggaggtgcatgaagttcaggtcgtattttcatgagttccaaatcaaaccgggatttaatattgtcctttttcttcccatccagatttaacaaggtacccacaatactatcgcaaacattcttttcaatgtgcatgacatctagattatgtcttatcgataacgtacaccaatatggcagctggaaaaatatactttttttcttccaaactccatataatgtgcttgagcgttttctcttattgttatgtttcccaaatttcacctgaatgcataaagtgatgtcaacaataatatactactcatattcttatactcaaagtaataccaaataaggcatagaatagcaaatagtataataatttactttcagattgaccagataggatacaagcataaatatatcataattagtagagtacctgattgaaattttgatattgacgcataatgtcatctcctgacaacgcttttggggcgctacgtctttccttttggccatcaaaagattttgcattgctcctccacgaatgtcttgttggcaagaagcgacgatgtcccatatagcagtatttgtgtccattaacgagcctatgggaccaagtgtccatgtgacaagaaggacatgcatattttcctttcgtgctcatgcctgataaattaccatatgcagggaaatcattgattgtccaaagcagcattccccgtagcttaaaagaggactttgcatgagcatcataggctggcacgccttcccatagctgtatcaattcatcaatcaatggctgcaagtatacatctatgtcatttccaggtgctttaggcccagggataagcattgacattatcatataagaatctttcatgcacatccaagttggtaagttatatatagcaataacaactggccatatgctatatgatgagctcatatttccaaaaggattgaatccatcactagcaaggcctagcctaacattccgtgcgtccaatgcgaatgattcaaaattcttgtcaaagttcttccattcattagaatctactggatgtctcatatatccatcatcaactagcttctctttgtgccatcgcatatgaacagctatttttgaacacatgtacatacgctttaatcttgggatcaaaggaaagtaccataaaaccttctgcggaactttcctagcttttctcctccttgacttgcgagcactattttctccatcctctttccatcttgaaattccacaaacagggcatgtttcagctttagcatattcacctctgaaaagaatgcagtcattcaaacatgtatcaatctttatataatctaacaccaaattattatcacaagaccacgataccctatggcagagacatgattttgctagatgtctagcatctaatatagcatatgcttattaattttttttagataatgagcatatgcttattaatgaaccagctcacgagctgagccaagctaagcttttagtattagctttgttaatgttaatgagctggcttattagttttccatgcagggaggtgccaacccacatcaacaattaatgtgcatgtgtgtatcattttttttcactccacaggttattgattcattaaacaattgccatatttgtttacgagagcttgttaacaaatgctggtgaacaaatattttggatcagcacaaacaaactaatttgttatgcacgcacgcataaatcggccagcaaaacatactttccctccaaaagtaattgccagcaaaattttactcccgccaaattgacagagttacctcactatataaggctgcccatctagtacaatccattcgcatctagagttctcgatccctgcgcacacttgcagtcaaaggtaaagaaacaaatctactatggctctttgctattctcgcaatcctataggatccattcggcattccccattttttattcactgcatagccctagagtacatccatctttgagagattacacccaccactgccgggacacaatcacacaaccaccatctccaaatcactgcagtcctatggatcttctggcggcgctggtgccgcaacatctacatattgatgatagcgtggtgtcgcagggatatgacctgccccttctggcgtccactctctccgtcttgtttttctgcatttatgatttgtgttaatttcctaattagatgcaacttaatatccatttttaattgggattctctttcttagttaatttggttctcaatcttatagtatatcggtgttttgtggggatttctatcttagtcaatttggtttgtaatcctgtagtagatctgtttgtactcatttcttattttgtaggtcaaaatggtttcccaagttcgtccatccgtgaaccagatggagacttcggatgatgctgctcgacaagtcataaccaatactaggaatgagggacggatgggaccaaccggaaacacaggtatttaacatatttaccttcacttcattaatctattccttcacaagcaaataaattaaaatacttcttccttcaattaggtctcaaacgtaggaaaggtaggggtctcaccattaatggaacacttgcaaaactgagagcaaggggtgtgccactagacattcaatttgctgcacagtttggaaaagtctatggtaggcacgcaagtgtctttaaaagtgaggtcactgtctgtgtgcgacaagaggtcccccttaaggtgaagaagtggaaagtcattgaaaaagcttttcctggaaccatgtcatcaatttggaatttattgaaggtatgtcatctggttggagttcttgaattttcggacacattagcatatttcatttgtacatttttgttttctttttgctgtcatgattttgtacattgtttgttcatatgatctactatcattctgtaggcaaaattccctgagatctcaatggcagactaccaatgtgtaatgacacaagttgagcgaaagtacaatgtaagacgccacaaactgtacaagacctattgcacaacaaaaacagtgtcctagtcatgttgcgccagaggactggcagtggttgattgataacttatggagtgatgagcaattccaggtacttgtttaattttctttacaattaatacaatatgattcataattcattattcttatgagattattatgtttttttagaaacggagcaaacataattccattaacagatcaaagcaagagatgaaatcacatgttggaacaaagtctatagtgcaaatagcacatgaactggtaaggaatattgtcattcacttatatctttaaactatatgtttgacatgtcttgtatatataaattataaggcttcttttgtatgtgatataattgcagagaaacctagtgacaggtgaatggcctagtgctatagatgtttggaaggcaacttatttgaagaatggaacatggtccgttcctaatggcgaagaaattctggtaaacaaaaatgtctgttacctacattttactgcatgagtttttttaatatggacttacatattttctttgatttgtttagaacaatctgcagacagtagctgaaacaaaccaggaaaggattgcagctgctcaaatcccaatggttgaacactttgcattagtccttggcagaaagccaaaccactcgcatggagttggtattagtgcaatcaatgagggagctcaagagaggtacagagttaatgcacaagcagaagctgcacaacagcaagccaatgaagcacatcaacaagctgctgctttgctagaagaagttcaaaaattgacagtagaaaacttgcaattaaagggcgagttgcagtctcagcgtgaagagttgaattctcagaaaagaaccgtagaggaacaaagtggtcacatggagtgtttgttggcccagaaacttgaggaaagaatgaaagcaatgtgggcacgcatgggtggcactggtggtgcttcatcttcaagtgtcccaaacaattaagtaagatttcttacgtcatacatgattactaattcaatctagtggtcattcgattaatgttatttttaaattatatgtaggaagttccaagttgacaaagactggcgtcgtggagttgctacaaagttctgtccatctaggcgagcatcctagagtccgtgtcccaagtttcatttgttgcttaggtgttcagttatcaatttagttatggtcttagttaaaatgctctttgtatgagcactttgttatcattcattaataaaggatagtttcctctagtgtgaggaacccttctgtcacacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0337500, RefSeq:Os09g0337500