Os05g0473500

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0473500| Description = Exo70 exocyst complex subunit family protein| Version = NM_001062357.1 GI:115464444 GeneID:4339086| Length = 2593 bp...")
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Gene Name

Os05g0473500

Description

Exo70 exocyst complex subunit family protein

Version

NM_001062357.1 GI:115464444 GeneID:4339086

Length

2593 bp

Definition

Oryza sativa Japonica Group Os05g0473500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23300759..23303351

Sequence Coding Region

23301108..23302882,23303164..23303176

Expression

GEO Profiles:Os05g0473500

Genome Context

<gbrowseImage1> name=NC_008398:23300759..23303351 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23300759..23303351 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgttccagcactcgatgccggagtctccgacgctgccgctgccaccgccgccagcggctgcggtgtcggcggcggcggccgcggggaggccgccgcccgtgacgtcgatggagcggaccgtccgcaccctcgaccgccagatctcgcagttcgtggcgatggacaggctgatatgggcggactccgcggacgccgacgcgttccttgaggcggtcgacgacctcatcggcaccgtgcaggagctggaagccgcggggaccaaccgcggcctgttcgaccgcgcggaggagctgctcagcaggtgcatggcgcgcctggaggaggagttccgggcgctcatcgagcgccccgacgacgcggtccccgcggcgcccggtgggttccggtcggacgggagcgacgacgaggaggacttcggcggcggggacggctacggcgacgagccgatcccaatcgccaagccggtgacggactacgacgtggtgatcgacgcgctctcgccggggtcggtggcgaatgtgcaccagatcgcgcggaggatggtggatgccggcttcggccgcgagtgcgccgaggtctatgccgccgcgcgtcgcggcttcgtcgacgagagcgttgctcgcctcggcgtccgcccacgaactgctgaagaggtccatgcctcctcctgggaggagctcgaattcgacatcgcccgctggatcccggccttcaacatggtgttccgtattctgattcccagtgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctttgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttcctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcgggaccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcagaggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttagaaaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccatcactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaagaggtgatggaaggtgacttcggcgctgttggtggagcggctgctgcagttgaccctgatcgtcccacctcgtcgcttgctgtgcacatagcatggatcatggatgtcttgcacaagaatttagatataaagtcgaagatataccgagatccatcactcgcttgcgtcttcttgatgaacaatggcaagtacatcattcagaaggtgaatgatagtgaacttggtgttttgcttggtgacgagtggatcaagcaaatgacaaacagagtgcggcgttggagcatggattaccagcgggtaacatggggcaaggtcacaacagtattgcagactggcggtcctggagtaggtggactccctgccacggcaatgaagcagaaactccggatgtttaatacctactttcaggagatctatgaagtacaatcagaatgggtgatagcagatgaacagctgcgggtggatgttagggcagcagtggcggaagctgtaatgccagtatatacagccttgatttctagattgaaatcatcccccgaagccaggcatgacttgtacatcaaatacaccccagaagatgttgaggcatgcatccagcacttgtttgaaggagcagctaagtga</cdnaseq>

Protein Sequence

<aaseq>MPFQHSMPESPTLPLPPPPAAAVSAAAAAGRPPPVTSMERTVRT LDRQISQFVAMDRLIWADSADADAFLEAVDDLIGTVQELEAAGTNRGLFDRAEELLSR CMARLEEEFRALIERPDDAVPAAPGGFRSDGSDDEEDFGGGDGYGDEPIPIAKPVTDY DVVIDALSPGSVANVHQIARRMVDAGFGRECAEVYAAARRGFVDESVARLGVRPRTAE EVHASSWEELEFDIARWIPAFNMVFRILIPSERRLCDRVFDGLAPFGDLAFVAAVRTQ ALQLISFGDAISSSSRAPERLFRVVDMYEAVRDLLPDLDPVFADPYSAALRAEVTAVC NTLGSSIKGIFMELENLIRRDPARVAAQGGGIHPITRYVMNYLRAACGSRQTLEEVME GDFGAVGGAAAAVDPDRPTSSLAVHIAWIMDVLHKNLDIKSKIYRDPSLACVFLMNNG KYIIQKVNDSELGVLLGDEWIKQMTNRVRRWSMDYQRVTWGKVTTVLQTGGPGVGGLP ATAMKQKLRMFNTYFQEIYEVQSEWVIADEQLRVDVRAAVAEAVMPVYTALISRLKSS PEARHDLYIKYTPEDVEACIQHLFEGAAK</aaseq>

Gene Sequence

<dnaseqindica>470..2244#176..188#ccggtccacgcgctgtcgccctcgcccagacgccaccgccgcaacgcgttgctgcgtggaaggaagccctcctcctcctcatccccttctccgccgcgcccaaccaccaccccgaagcgaagccgcgtggaggtggaggcgtcgtgcagatcggggctgtgccgctcgccgtgggatgccgttccagccccggaggtgaggtagctcgacgtctgcttgtgttttttttttctttccccggcgcggattactgaggcgatggcggaggacggggaggagaagctgctcgcgacggtgcagcacatcgtgcagacgctggggagcagcgacaccatgacggaggacatcctcagggtcttctccaactacgacggccgcctctcgctcgacaagctctacgccgcgcgggccgcggcggcctcggccgctggcggcggcggcggcggcggcttagggggaggaggggagcactcgatgccggagtctccgacgctgccgctgccaccgccgccagcggctgcggtgtcggcggcggcggccgcggggaggccgccgcccgtgacgtcgatggagcggaccgtccgcaccctcgaccgccagatctcgcagttcgtggcgatggacaggctgatatgggcggactccgcggacgccgacgcgttccttgaggcggtcgacgacctcatcggcaccgtgcaggagctggaagccgcggggaccaaccgcggcctgttcgaccgcgcggaggagctgctcagcaggtgcatggcgcgcctggaggaggagttccgggcgctcatcgagcgccccgacgacgcggtccccgcggcgcccggtgggttccggtcggacgggagcgacgacgaggaggacttcggcggcggggacggctacggcgacgagccgatcccaatcgccaagccggtgacggactacgacgtggtgatcgacgcgctctcgccggggtcggtggcgaatgtgcaccagatcgcgcggaggatggtggatgccggcttcggccgcgagtgcgccgaggtctatgccgccgcgcgtcgcggcttcgtcgacgagagcgttgctcgcctcggcgtccgcccacgaactgctgaagaggtccatgcctcctcctgggaggagctcgaattcgacatcgcccgctggatcccggccttcaacatggtgttccgtattctgattcccagtgagcgccggctatgtgaccgcgtcttcgacggcctcgccccctttggggaccttgcctttgtcgccgccgtgcgcacacaagccttgcagctcatatcattcggcgatgctatctcttcctccagccgcgctccggagcgcctcttccgagtggtggacatgtacgaggctgtgcgggaccttctccctgaccttgatcctgtgttcgccgacccgtactctgctgcgctccgtgcagaggtcacggcggtgtgcaacaccctcggctcatcgatcaaaggcatattcatggagttagaaaatctcatccgccgtgatcctgctcgagttgcagcccaaggtggaggcatacatcccatcactcggtatgtcatgaactatctccgtgctgcttgtgggtcgcggcagacattggaagaggtgatggaaggtgacttcggcgctgttggtggagcggctgctgcagttgaccctgatcgtcccacctcgtcgcttgctgtgcacatagcatggatcatggatgtcttgcacaagaatttagatataaagtcgaagatataccgagatccatcactcgcttgcgtcttcttgatgaacaatggcaagtacatcattcagaaggtgaatgatagtgaacttggtgttttgcttggtgacgagtggatcaagcaaatgacaaacagagtgcggcgttggagcatggattaccagcgggtaacatggggcaaggtcacaacagtattgcagactggcggtcctggagtaggtggactccctgccacggcaatgaagcagaaactccggatgtttaatacctactttcaggagatctatgaagtacaatcagaatgggtgatagcagatgaacagctgcgggtggatgttagggcagcagtggcggaagctgtaatgccagtatatacagccttgatttctagattgaaatcatcccccgaagccaggcatgacttgtacatcaaatacaccccagaagatgttgaggcatgcatccagcacttgtttgaaggagcagctaagtgatcagttgatcagtacgttatggtactggcgtgctgcagcctgcagcttctactacagggtttgtggagttctatcatggatcctggtgaatatctgcgtcccattattggtgattttcatagcttaacctttcatcctcattgtttgtattttgtcctccatgaagaaatcatgaggtaagacaaatggtgtacaactgtacatgactactgtaggtgtatctgtaccaattagtaaggtgattattttgtaacaatcaggactatttttccatttgtttcaactatttcagattaacagctaagtgtttatgtgtgaatttctgttatttactttaggaagtttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0473500, RefSeq:Os05g0473500