Os09g0344500

From RiceWiki
Revision as of 20:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0344500

Description

Similar to O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)

Version

NM_001069466.1 GI:115478674 GeneID:4346795

Length

1566 bp

Definition

Oryza sativa Japonica Group Os09g0344500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11306054..11307619

Sequence Coding Region

11306389..11306688,11306790..11307584

Expression

GEO Profiles:Os09g0344500

Genome Context

<gbrowseImage1> name=NC_008402:11306054..11307619 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11306054..11307619 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaaaatgtccaagaaaatgagcaggtgatgagcacggaggacttgctccaagctcagatcgagctctaccaccactgcttggccttcatcaagtccatggcacttagggccgccactgacctgcgtattcccgacgccatccactgcaacggcggcgctgccaccttaactgacctcgccgcccatgtcgggctgcacccgacgaagctctcccaccttcggcggctcatgcgcgtgctcactctctccggcatctttaccgtccatgacggcgacggcgaggccacctacacgctcacccgagtctctcgccttctcctcagcgacggcgtcgagagaactcacggcctctcgcaaatggtgcgcgtgtttgtgaacccggtcgccgtggcttcgcagttcagcttacacgagtggttcactgtcgagaaggcggccgccgtgtcactgttcgaggtggcgcacggctgcacccgttgggaaatgatagcaaacgattccaaagacggcagcatgttcaatgccggcatggtagaggatagcagtgtcgccatggatatcatcttgaggaagagcagcaacgttttccggggcatcaactcgcttgttgatgtaggcggtggctatggcgccgtagctgcagccgtagtgagggcattccctgacatcaagtgcacggtgttagatcttcctcacatcgtcgccaaggctcccagtaacaacaacatccagtttgtcggcggtgatctttttgagttcattccagcagccgatgttgtgctacttaagtgtattttgcactgttggcaacatgatgactgtgtcaagattatgcggcggtgcaaggaggcaatctcagcgagggatgctggaggaaaggtaatactcatcgaggtggttgttgggattggatcaaacgaaactgttcccaaggagatgcaacttctctttgatgttttcatgatgtacaccgatggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtgactacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttacccttga</cdnaseq>

Protein Sequence

<aaseq>MAQNVQENEQVMSTEDLLQAQIELYHHCLAFIKSMALRAATDLR IPDAIHCNGGAATLTDLAAHVGLHPTKLSHLRRLMRVLTLSGIFTVHDGDGEATYTLT RVSRLLLSDGVERTHGLSQMVRVFVNPVAVASQFSLHEWFTVEKAAAVSLFEVAHGCT RWEMIANDSKDGSMFNAGMVEDSSVAMDIILRKSSNVFRGINSLVDVGGGYGAVAAAV VRAFPDIKCTVLDLPHIVAKAPSNNNIQFVGGDLFEFIPAADVVLLKCILHCWQHDDC VKIMRRCKEAISARDAGGKVILIEVVVGIGSNETVPKEMQLLFDVFMMYTDGIEREEH EWKKIFLEAGFSDYKIIPVLGVRSIIEVYP</aaseq>

Gene Sequence

<dnaseqindica>932..1231#36..830#agtagcacatatagtactgcacgaagaactacaccatggcgcaaaatgtccaagaaaatgagcaggtgatgagcacggaggacttgctccaagctcagatcgagctctaccaccactgcttggccttcatcaagtccatggcacttagggccgccactgacctgcgtattcccgacgccatccactgcaacggcggcgctgccaccttaactgacctcgccgcccatgtcgggctgcacccgacgaagctctcccaccttcggcggctcatgcgcgtgctcactctctccggcatctttaccgtccatgacggcgacggcgaggccacctacacgctcacccgagtctctcgccttctcctcagcgacggcgtcgagagaactcacggcctctcgcaaatggtgcgcgtgtttgtgaacccggtcgccgtggcttcgcagttcagcttacacgagtggttcactgtcgagaaggcggccgccgtgtcactgttcgaggtggcgcacggctgcacccgttgggaaatgatagcaaacgattccaaagacggcagcatgttcaatgccggcatggtagaggatagcagtgtcgccatggatatcatcttgaggaagagcagcaacgttttccggggcatcaactcgcttgttgatgtaggcggtggctatggcgccgtagctgcagccgtagtgagggcattccctgacatcaagtgcacggtgttagatcttcctcacatcgtcgccaaggctcccagtaacaacaacatccagtttgtcggcggtgatctttttgagttcattccagcagccgatgttgtgctacttaaggtacatccatacaagtaactttttcgatatagtagttttaactagtaagtggcttgtttaataatttggaaattttgtcttaattttgcatgtgatttcagtgtattttgcactgttggcaacatgatgactgtgtcaagattatgcggcggtgcaaggaggcaatctcagcgagggatgctggaggaaaggtaatactcatcgaggtggttgttgggattggatcaaacgaaactgttcccaaggagatgcaacttctctttgatgttttcatgatgtacaccgatggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtgactacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttacccttgatgctcctagaggtgtacatgtgcatctcaccatgtgacctactctagttcaaataattgaacaaaatgcataatatgttacttaaaaaccgatcggtttgatgttagtattttgatttccttttattcaggagtcagtagtgcgcacgatcacaccaaggccactgttctcattttcctatgtatgagctacaatacgcacgccgttggatggcacggcttatgcgcatcgtggctcaagtctcgggcatgttgttagcccaaaatttccattcctatattcaacataataagaggaagagaaaaccgaaaagctgcaaggcagttcgcagcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0344500, RefSeq:Os09g0344500