Os05g0474400

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0474400| Description = Prenylated rab acceptor PRA1 family protein| Version = NM_001062359.1 GI:115464448 GeneID:4339088| Length = 1097 bp|...")
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Gene Name

Os05g0474400

Description

Prenylated rab acceptor PRA1 family protein

Version

NM_001062359.1 GI:115464448 GeneID:4339088

Length

1097 bp

Definition

Oryza sativa Japonica Group Os05g0474400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23330443..23331539

Sequence Coding Region

23330543..23331205

Expression

GEO Profiles:Os05g0474400

Genome Context

<gbrowseImage1> name=NC_008398:23330443..23331539 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23330443..23331539 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcagcaccgacgccgccgccgctcctcccggtgaccaacccggcagccgcggggtcgtccccggccgccaccgccgtgggatctgacgcgccgatcgcaaccccggcgttccggctcttcctgagcaagctctccgactcggcgcggcgctcgctgtccgaccggcggccgtggacggagctggtcgaccgctcggcgttctcgcggccggactccctctccgacgccacctcccgcctccgccgcaacctcgcctacttccgcgtcaactacgccgccgtggtggccttcgcgctcggggcgtccctcctcgcgcaccccttctcgctcctcgtcctcctcggcctcctcgccgcctggtgcttcctctacctcttccgcggctccgaccagcccgtcgtcctcttcggtcgcaccttctccgaccgcgagacgctgctcggcctcgtcgtcgcgtcgttcgtggccttcttcttcacctccgtcgcgtcgctcatcatctccgggctgctcgtcggcggggccatcgtcgccgtccacggcgcgtgccgcatgcccgaggacctcttcctcgacgacgctgacgccgccagcggcaacagcgcggcccagggtctcctgtccttcctcggggcgcccggatctagggtttga</cdnaseq>

Protein Sequence

<aaseq>MASSAPTPPPLLPVTNPAAAGSSPAATAVGSDAPIATPAFRLFL SKLSDSARRSLSDRRPWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFAL GASLLAHPFSLLVLLGLLAAWCFLYLFRGSDQPVVLFGRTFSDRETLLGLVVASFVAF FFTSVASLIISGLLVGGAIVAVHGACRMPEDLFLDDADAASGNSAAQGLLSFLGAPGS RV</aaseq>

Gene Sequence

<dnaseqindica>101..763#agagaaagcaaagcaaccaccgtaccgcaaccgcaaccgcgagagccgagagagaagcctttttccccgatcgattcccttctctccgctccgcatcgccatggcctcctcagcaccgacgccgccgccgctcctcccggtgaccaacccggcagccgcggggtcgtccccggccgccaccgccgtgggatctgacgcgccgatcgcaaccccggcgttccggctcttcctgagcaagctctccgactcggcgcggcgctcgctgtccgaccggcggccgtggacggagctggtcgaccgctcggcgttctcgcggccggactccctctccgacgccacctcccgcctccgccgcaacctcgcctacttccgcgtcaactacgccgccgtggtggccttcgcgctcggggcgtccctcctcgcgcaccccttctcgctcctcgtcctcctcggcctcctcgccgcctggtgcttcctctacctcttccgcggctccgaccagcccgtcgtcctcttcggtcgcaccttctccgaccgcgagacgctgctcggcctcgtcgtcgcgtcgttcgtggccttcttcttcacctccgtcgcgtcgctcatcatctccgggctgctcgtcggcggggccatcgtcgccgtccacggcgcgtgccgcatgcccgaggacctcttcctcgacgacgctgacgccgccagcggcaacagcgcggcccagggtctcctgtccttcctcggggcgcccggatctagggtttgaggcggcggcgggcgacgagatctggtaggcttctttggctcgagtgtttcgcgttactctgtaattgatctggatctgatctcgttggatctatatcacatttgttctctaattcatcattctgcaatccgtagctacagatctactacttgtttacctatattttggatcgatgtatcactttgcgaagttgtgctgaatatattgagtctcttgacgagatttagtgttaaaattactaccttatattgttttgaattaatttagcatgaatgtatgaagagtatgtcgacttatcactgtttaaatagtagagaagaatatatgatggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0474400, RefSeq:Os05g0474400