Os09g0356000

From RiceWiki
Revision as of 20:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0356000

Description

Protein kinase-like domain containing protein

Version

NM_001069501.2 GI:297609324 GeneID:4346833

Length

9154 bp

Definition

Oryza sativa Japonica Group Os09g0356000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12031931..12041084

Sequence Coding Region

12031931..12032324,12032534..12032726,12032876..12032944,12033320..12033446,12033685..12033947
,12034039..12034196,12034532..12034603,12034696..12034834,12037319..12037785
,12038882..12038932,12039243..12039807,12041015..12041084

Expression

GEO Profiles:Os09g0356000

Genome Context

<gbrowseImage1> name=NC_008402:12031931..12041084 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12031931..12041084 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcttggctttcttcgccgtactcgtcttagcaacggcggtcgttcctgccgtcagccagcaaggatacctgagcatcgactgcggcctggaggccaacagcagctaccaggacgacaacaggatcttgtacgtgcccgacggtccgtacgtcgacggcggggagaaccacaaggtggcggcggagtacgcgtccagcttccagcgcccagaccagacgctccggagcttcccctccggcgtacggaactgctacacgctccccaccgccgccgggtccaagtacctggtccggctggtgttcgtctacggcaactacgacggcaagaacatctcctcctcctcctcgtccgcggcggcggcggcgctcaggttcgacctgtacctcgggctgagccgttggaccaccgtgcagggcggcaccggcagcggcggcgaggtgcacgaggcggtgttcgtggcgtgggcgagctgggcgcccgtgtgcctcgtcaacaccggcagcggcacgccgttcgtgtccacggtggagctgaggccgctcgtggattcgctctacccggctgtcatggccaaccagtccttggccatgcttcgacggcgtaatatggcggcaaacaatttcatacggcggcaccttgtgtggtcctcctgcaaaaatcatgcctacagaaaaaatatgtatcctgacgacccatatgaccggtactggtggccaatgaatgctgaccccgcatgggccaacctttcaaccacgtcaaccattaagactggatccacatttgcggtgccctcgagtgttctccaaacggccgttacaccatccggaaacagtacggtgcttaacgtcataagctggcaagacacaacggccaaagagtatgtggtgtacctgcattttgccgacttccagagcagcaaactccgggagtttgatgcttaccctgatgccaaccaggtagtgtacaattacaccccacattacttgttatccagtagcgtgtacacacccttgttcagggccattgctggtgagtataatattactcttgccgccactgccaactctgcgttgccccctatgctcaatgctttcgagatctacttcctcatcacctacgacggcacgacaacgttctccaaagactttgatacaatcatggctattaaactcgagtatggggtaaagaagaactggatgggtgatccatgttttccacctgaatttgcttgggacggcatcaaatgcaggaacaccagtggtaacattatgaggataatatcgattgatctctccaacagcaacctttttggggtgatatctaataacttcacattgcttactgcactcgagaaattttatggatctgatggaaatatgtgcaacaaaacaataggttcgtctccatcaagaaacagaacgggtatcttagctatttcagtagtggtgcctgtgctggtagtggctctacttgttcttgcatatatgatctggagagtgaagagaaaacccaatattcctacgtatgttcctcctcaagtaccagatatcaagacttcgccagaaaggaaaacaaatccttttgatcctctgcaaataactgaaagtcggcaattcacatacgaggagctaaagaagtttactaataacttccaacagttcattggacgaggaggctttgggaatgtctattacggctgtttagaaaacaaaaccgaggttgctgtcaaaatgctctctgaattctcggagaatggccttgatcagtttttagccgaggttcagagcttgacaaaggtgcatcacaaaaatctagtttctttggttggttattgctgggaaaaggatcacttagcactggcttatgagtacatggctagaggcaatctttgtgatcatctaagaggtaaatttggtgttggtgatacctttaactgggtaacccgtgtgcgagttgtgcttgatgctgcacaaggtctggagtatctgcacaaaggttgcaacttgccaataattcacggggatgtgaagaccaataatgtactcttgggtgaaaatctaaaagctaaaatcgcagactttgggctttctaaaacttatattagcgagacacagactcacatatcaaccagtaatgccgctggaacaatgggttacatcgaccccgagtactatcatactggaaggctgacagagagcagtgatgtttatagcttcggtgttgttctactagaggtagccaccggtgaacctccaatactacctggcagtggccacatcattcagcgtgtgaaacagaaagttgcatctggtaatatcagcttggttgccgatgcacgactcaaagatttgtacgacattagctccatgtggaaggtggttgatactgcaatgctctgcatatcagaggttgctactcaaaggccaacaatgtccaccgtggttctacagctgaaggagagcttggcactggaggaagcccgtgacagcagggacatcacgacaagctcagttagtgatgccatggatgtgttgtcaaaatttggtccatcggcaagatga</cdnaseq>

Protein Sequence

<aaseq>MEFLAFFAVLVLATAVVPAVSQQGYLSIDCGLEANSSYQDDNRI LYVPDGPYVDGGENHKVAAEYASSFQRPDQTLRSFPSGVRNCYTLPTAAGSKYLVRLV FVYGNYDGKNISSSSSSAAAAALRFDLYLGLSRWTTVQGGTGSGGEVHEAVFVAWASW APVCLVNTGSGTPFVSTVELRPLVDSLYPAVMANQSLAMLRRRNMAANNFIRRHLVWS SCKNHAYRKNMYPDDPYDRYWWPMNADPAWANLSTTSTIKTGSTFAVPSSVLQTAVTP SGNSTVLNVISWQDTTAKEYVVYLHFADFQSSKLREFDAYPDANQVVYNYTPHYLLSS SVYTPLFRAIAGEYNITLAATANSALPPMLNAFEIYFLITYDGTTTFSKDFDTIMAIK LEYGVKKNWMGDPCFPPEFAWDGIKCRNTSGNIMRIISIDLSNSNLFGVISNNFTLLT ALEKFYGSDGNMCNKTIGSSPSRNRTGILAISVVVPVLVVALLVLAYMIWRVKRKPNI PTYVPPQVPDIKTSPERKTNPFDPLQITESRQFTYEELKKFTNNFQQFIGRGGFGNVY YGCLENKTEVAVKMLSEFSENGLDQFLAEVQSLTKVHHKNLVSLVGYCWEKDHLALAY EYMARGNLCDHLRGKFGVGDTFNWVTRVRVVLDAAQGLEYLHKGCNLPIIHGDVKTNN VLLGENLKAKIADFGLSKTYISETQTHISTSNAAGTMGYIDPEYYHTGRLTESSDVYS FGVVLLEVATGEPPILPGSGHIIQRVKQKVASGNISLVADARLKDLYDISSMWKVVDT AMLCISEVATQRPTMSTVVLQLKESLALEEARDSRDITTSSVSDAMDVLSKFGPSAR</aaseq>

Gene Sequence

<dnaseqindica>8761..9154#8359..8551#8141..8209#7639..7765#7138..7400#6889..7046#6482..6553#6251..6389#3300..3766#2153..2203#1278..1842#1..70#atggagttcttggctttcttcgccgtactcgtcttagcaacggcggtcgttcctgccgtcagccagcaaggtttcttttatttttacaagcttatatatattttcggagcgtttgcagcggaatttttattttaaaaagtaatattatcatgcattaatccttctagtttacaccagtatataccatctcttatttcttttctacatatagtctttaactgattggtgggcctttgcccccaaactatattttttttcttgacaaaaagaagcaaggagttagtggtgcggagtggtgacaaaattcaccactcacccgtatcactagcttcttttaaaatatcgattggttttctgaataaactgaaagaaccgactaaaagaatcaagtagttagttaaaaatcatcacttggtttcttgttgatcttcattctcaacccctatctatttacatggataatcaataaaatagtgaacaacacttattaccccaagcaattgcaaagcatatccttaccccagtggcgaagacagagatatttttgagcccgaacaaatttcaatatactagtaggagtatttgctataaaaattcattatcaatttaaacatcaatattaaaatttaatgaagttttcaccggcgagcccgagcgctgcccgggctaaccgggcggtaactccgccactatagagccactgcccttacaagtattatcttaaaaaaggatatactccctccatcctaaaatataagtatttttacacattgatacaatctacgagatgctactttgagcaataatatctatataaataagatattttaaattaaaaaagttgcatattatgatagtttgttcaatgataaatctagtaacattaattttacatgattgctattttttattctatttctatttatagcccaagttaaaaatatttaacctgtcactattctaaaaattaatgcttatatttgggatgtaggggtatcatttattccctccgtcccaaaatataataacttctagcatctaggatttatctcaaaatataacaacttctgcaccaacattctcttttcaacccatcataatcctctatcattcaaatttctcgcataccttcatttctcatccaatcacaaccctccctattcaattctacatatctcttttttaataaccgtatccaactttaaagatgtttatattctgatacgagagagtagtttcttatttccttaacttgcggcgtgtaacctaccttgcaggatacctgagcatcgactgcggcctggaggccaacagcagctaccaggacgacaacaggatcttgtacgtgcccgacggtccgtacgtcgacggcggggagaaccacaaggtggcggcggagtacgcgtccagcttccagcgcccagaccagacgctccggagcttcccctccggcgtacggaactgctacacgctccccaccgccgccgggtccaagtacctggtccggctggtgttcgtctacggcaactacgacggcaagaacatctcctcctcctcctcgtccgcggcggcggcggcgctcaggttcgacctgtacctcgggctgagccgttggaccaccgtgcagggcggcaccggcagcggcggcgaggtgcacgaggcggtgttcgtggcgtgggcgagctgggcgcccgtgtgcctcgtcaacaccggcagcggcacgccgttcgtgtccacggtggagctgaggccgctcgtggattcgctctacccggctgtcatggccaaccagtccttggccatgcttcgacggcgtaatatggcggcaaacaatttcatacggtatgttcggagtcaacgacaactttctatcttttttttttaacgattgttaattagccggttttctcagaatatgtgtaggattaactttagtagtactactagaaaaaacatttttcgcagacgtgaaatttttttccagacgggtatggtcctcggagccaaatggccgcctgcgacattgtaaaccggggtggagctagccatccgcatgaatatatttttacaagcgaaccacttaagaggtccgtctgtgaaaatacctttaagaatcttaagatgtccgcttggaaaaatatgattttcttaggcggcaccttgtgtggtcctcctgcaaaaatcatgcctacagaaaaaatatgtaagtcccatctttatcttctcctacaccatccttaccctctccaccaatcattttcctcctccccctctctctctcttccttcccggtagatgcgggtcgcgtgacggtctccctttcccggtgacggcggcagctcaacgacgaggaggggaggcatcgcccgtgacgaggaggggagggaaggtggcggctcagctcctccctctcctggcgacggcggcgactcaacgacgaggagatcgcgacgacgatgacgacgccttctggatccgccaccggccggtctcggggagggaaggtagcggcgacgcgaggaggtgaggggaggggaggggatgtggcggctcggctccttcctctaccagcctggcaacggcggcgatgaggagggctagcaatggcttgacgacgaggaggggaggcagcaactgtgctccaaccctctccctcccttcctcccagatccgtccaccgccgccggcggtggcaggtaggggtggtggcgacgaatttttttttcttcgcgaaattattttcgtaggctggtggatctaccgcctatgaagatggagatgccgtctgcgaaaatcatctattttcgtaggcctttgtttatatgcggctctttccccgcctaagaaaactatttttggccacctgggaaaatgattttcctagtactgtagcttccgtggactgtggtgcaggaaatacaaatttaactgaaattggcacttagatatatctagtagaagaaatacacaggtaaaaagtactccgtaaaactatgataaagaataatgtacattgaaagagtgcagtgtacgtatgtccatggtaattcaattccttatagaaaataataaagtctataaagataaaatattttagtacctacacatacgaattcaactacatatatgcagagaaaacaaagcatttaatttgttgtctttagaggctgaatcttgagcattttttgctacaacaaaataattacgaagatatattgaggaggatgttcgatctctaaattaaacactaaggacaaaacgctgcgtatatatgatttgttttaatttcttaaatataggtatcctgacgacccatatgaccggtactggtggccaatgaatgctgaccccgcatgggccaacctttcaaccacgtcaaccattaagactggatccacatttgcggtgccctcgagtgttctccaaacggccgttacaccatccggaaacagtacggtgcttaacgtcataagctggcaagacacaacggccaaagagtatgtggtgtacctgcattttgccgacttccagagcagcaaactccgggagtttgatgcttaccctgatgccaaccaggtagtgtacaattacaccccacattacttgttatccagtagcgtgtacacacccttgttcagggccattgctggtgagtataatattactcttgccgccactgccaactctgcgttgccccctatgctcaatgctttcgagatctacttcctcatcacctacgacggcacgacaacgttctccaaagactgtaagctcactcaattacgctctctcgcactaaatgtgcaccaacattgctccaaaatatgggttaaacgcatgtatgctatagaagggtttcacctattgacatatctgtcaatatgctattgattttttaaaattactataatgccgttagtttggtgatgaagatgtcactatttctcaatcagccatttcttttgttaaaattactataatgccattagttttgtaacgaagactaaaaatgccattctgccgaagtgtcactgttagatcaacaataattaacacaggttgagggccctttggatttttgaaggatttgtggaggattgaaatccttagaaaatttttcctacgaggccatttggatcaaaggaactggtatctcagaattcctatggattgatttcctatgcccccatcctgtaggaaaataaacataagctcatacctcatgctttttttttaacctttgagaagcccaatgcactctcttcctttctccctctaatttctctctagcacaaacaattttctttagaattcccatgttttgatttctcgcgaaccatccaaacacaccaattctagtatgctttggaaccctgtaggattgtgttgaacatgacatcctcttcatgcattttcatgtttgcatgtttttagagtcctgccttccaaaggagccatgactgtttatgaaaagcacctataagaaaaaggaaaacatacatggcagtttgcactactatattaatatttttcactgctagaagctttcctttccataggcggctcaaatttcaagccgccatggctgaggcttctttatggtcatggacgacatgtgaaaacctatatctgcatacagttcttttaaaaaaaatgcctgtggagacaagaaaactgcatatgaaaatcattatttttggagatgatcctgaagaaaactttctatgagaataggatgatttttaaaggtgatttgcttaagaaaccgcttgcaaataatcaattagtgcagacagatctttaggaagtctgcctacggaaatatttttcctcataatattttctgtgtaaatactcaaactatcaaaattgaaagatttcattttaagtccaattgaggtgaaccaaagcttacaatatttcctttaatatggtcagatcaatatttttagaattgtttaaatgtggtggtatatatgcatattaagattagtgaatgatcatattaaagaaaatattccaaggaaatattgatctcataatatgaaaaaaaaaagcattgtaagggtccaagagaactttgatttacgtcaatcgaatttaaaatgaatttagtttggacagttttaaaggataacagaaaggtttccacaagcttactttacagagaatcgcctgaattaatcagcagacattttagagaatcgtctgtacaaatcaattagtgcatacggtccggatgaatttccaacatagtagtgaaggtgatgaataataatgcctacatcgccagcagcccaaatggcatcaccgggtggaagcaggggcaccattgcttgagcagcagaacccctcacctgacttggttagtttttttttttagattgacttggttagttaatctcctacacactgtgtgaggattctctatcataacgttagtatcattatcattatagtcactgatatatgggtcccacccttctattaccccacatatcaattactataataatagtgttattatggtagaggatatgaacccgtgaacactacttgggcaggacttgcctcctgcaacttctcaccttctcctagccgctgcctggcttgtgcgcattcgaggtattcgatcaaattaacggtaaggttggctctctggtcagtgccttaggccgagtttagttccaaactttttcttcaaactttcaatttttccatcacatcaaaactttcctacacacacaaacttccaacttttccatcacatcgttccaatttcaaccaagcttctaattttgacatgaactaaacacacccttagtggatcccacttcccacatgttggtgtccattgggcttaaaaagatcaagggagggagtggacaattatcccactgttgtctgcttcgatcgaactgagaattctttcttgaatcaggcatttttgtctcaacaaaagtctaagacactagggaagttctaacagttaatggagacatggattgttcatgccatgtttttgaaagtacgatttctcaaaaaaaaaaaaacaagaagaagaaactttctacatcaactacaagataactttctttagttatattttcaccttataatatttgattcatccatatgagcaattttttcctctgcccatatctatagtcacctagttagaatgcaccctgagagtatatggtgcctttaatcatttaataaactctgtaccttccttttcctatgctagttgatacaatcatggctattaaactcgagtatggggtaaagaagaactggatgggtgatccatgttttccacctgaatttgcttgggacggcatcaaatgcaggaacaccagtggtaacattatgaggataatatcgatgtgagtagtactccgaagatcctagatgcattacaattgtgtatagttggcaccttttgccttatgttggattactttttttttttttgcagtgatctctccaacagcaacctttttggggtgatatctaataacttcacattgcttactgcactcgagaaattgtaagtagcgacattttcatcaaatccatccacattcgtttagctatatatggaattccatttgacattaatggggactagagaatttgaaaagatatttttttgttgttactgagaaaggactttgttaaatatctaaatttcatgtcacttttcacagaaatttatcaggcaaccaactgaatgggcccattccagactctctctgtaaaaacaatgcaggacaattcgttttcaggtttgggtagtcttgttaacttttgctaattaatattttgatccaggtatgttgctaaaacaaaccctgaactgttggttttatataattattacagttatggatctgatggaaatatgtgcaacaaaacaataggttcgtctccatcaagaaacagaacgggtatcttagctatttcagtagtggtgcctgtgctggtagtggctctacttgttcttgcatatatgatctggagagtgaagagaaaacccaatagtgcgtatgctcttctcctcttataagctctactgaaatatcttggttattaagttatttctgttatataactggctttttgcacaaccagttcctacgtatgttcctcctcaagtaccagatatcaagacttcgccagaaaggaaaacaaatccttttgatcctctgcaaataactgaaagtcggcaattcacatacgaggagctaaagaagtttactaataacttccaacagttcattggacgaggaggctttgggaatgtctattacggctgtttagaaaacaaaaccgaggttgctgtcaaaatgctctctgaattctcggagaatggccttgatcagtttttagccgaggtatcaaattttagttactgaaaaattaaatatacttgtaaataaataactctatttgattaataaaaattaacaatagtagattccacacaacttggaaaaaaacgttaagaatatatttccaaattttagatggcacacatgtaaatgtaaacttagtgactttcattcaaactaagactacattcaaatagagagattattagattgaccgtatattttgtatctcatgacataggttcagagcttgacaaaggtgcatcacaaaaatctagtttctttggttggttattgctgggaaaaggatcacttagcactggcttatgagtacatggctagaggcaatctttgtgatcatctaagaggtttgtctgttacaaacttatgtgttgcttgagaataaagtgtcaccatcctccgtctgtttttaaaattgcatatatgaaataattgtgcagtgtttgtatctctatctgggtaagcaatgaagaatatcaaactctagtcaagttctccacaacctagattctcccctcatcccaacaaagccaacactgtctgactatcttctcggcagtgtttacccaatggctctatatttacaagaactcattgcattttgacaatttgatggttcaattttgattagtttgtgcagtttgcataaatttgctcattccacacttgaactgaaatacttggtaaaggtctatttttacagtcaatgttcttatatgaaggtaaatttggtgttggtgatacctttaactgggtaacccgtgtgcgagttgtgcttgatgctgcacaaggtatgcttaaaacaaaacacaaagataattatttctcttaaggaatattatagctcatgccactcttttttttatttgttttctttttgagctagtgccactctttttctcattatagagttttgtgatttggtacactataaatataggtctggagtatctgcacaaaggttgcaacttgccaataattcacggggatgtgaagaccaataatgtactcttgggtgaaaatctaaaagctaaaatcgcagactttgggctttctaaaacttatattagcgagacacagactcacatatcaaccagtaatgccgctggaacaatgggttacatcgaccccgagtatgcttttctgtccatcccattaacattttacttatttaatttgcatcaatttgaatgagtaaatcataaacaacttgatttaattttataagtttagcatgtttgaaagaaaactcataaattgattgtcatgttttcaaacacatttttatcttaatctcttcaagctatccttagttttattaatacactacatgcatttttaggtactatcatactggaaggctgacagagagcagtgatgtttatagcttcggtgttgttctactagaggtagccaccggtgaacctccaatactacctggcagtggccacatcattcagcgtgtgaaacagaaagttgcatctggtaatatcagcttggttgccgatgcacgactcaaagatttgtacgacattagctccatgtggaaggtggttgatactgcaatgctctgcatatcagaggttgctactcaaaggccaacaatgtccaccgtggttctacagctgaaggagagcttggcactggaggaagcccgtgacagcagggacatcacgacaagctcagttagtgatgccatggatgtgttgtcaaaatttggtccatcggcaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0356000, RefSeq:Os09g0356000