Os05g0475300
| Gene Name |
Os05g0475300 |
|---|---|
| Description |
VHS domain containing protein |
| Version |
NM_001062365.1 GI:115464460 GeneID:4339094 |
| Length |
4230 bp |
| Definition |
Oryza sativa Japonica Group Os05g0475300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:23397736..23401965 |
| Sequence Coding Region |
23397815..23397954,23398814..23398892,23399077..23399175,23399517..23399630,23399718..23399866 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:23397736..23401965 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:23397736..23401965 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtacccggtggtgacggggccgccgccggcgaggctgccggcgtcgacgcgggtggacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgacaccctcaacgccgaccgctggcaaacaaaggatgtggtaaaagctgtgaagaagcggttgcaacataaagatccaagagttcagtttttcactttgacgttgttggagacaatgatgaagaactgtggtgaatatgtccattttgaagttgttgaacaacatattttgcaagaaatggttagaattgtccagaagaagcatgatactcaagtgagggataaagtattgatacttctggactcatggcaagaagcatttggtggacctggaggcaaatatccacagtattactggtcatacattgaacttaagaggtcaggaataatgtttcccaggcgccctgtagatgctcctccaatatttactccccctgcaacacatcatactcagtcttatggttcacctacatatcctgctggaagtctaaatgagagaatgacatccgatgttgaaactctgagtttaggggacttaaataatattagagatacaacagaacttctgtgtgatatggtgaatgctttgaatccttctgatcgcatggctgttaaagatgaaattatttcagagcttgtcacccaatgccgatcaaatcaacaaaagctcatgcgatttgtcagttccacaggaaatgaggagctactgaagcaaggcctagaaatcaatgatcacttacagagcgtacttgcaaaacatgatgccattgcttctggagctcctttgccggtcgaaacaccaaggaaagacgagatacccagagaagatccaaaaataaagccatctgcacctccgattgcacctccatccgcacctccagttgaagaggatgaagatgacgagttcgctcagatagcaagaagaaaaaacaaatctgtgataagtagtgatgaggcatcatccagtgctggtgatcaggcccttgtacccgttgacccagtaacttctgaagcctcatcttctgttgcaagcaatgcagtggtgcctgttgactcgtctcctgccagtggtactcggacaagagagcaggacatgatcgaccttctaagcctcaccctgtacagcccccctgaagcatctacagattcttcttcacagacccaaaatggcacgcagcagtctgtcacgtcaaatgggccagaattaccaccaaactatcagcctgctgcatcaaatggatcacattactcttctaaccagcaggcatatccaacgaatcaagcttacaccccatacaacaattatgttgtaccttgggcccaagctggacagggcacacaggctggaggagcatatcaaactcagcccatgcaacaatatggatctagctacccagcaccaccatgggcgatgccagcaagtgtcaactcaaccaatccttttcagcctgcaacataccagatgcagaaccctcctgttgcttctgttgcccccacaaatacctatccagctccttcatcgccgtatgctgctccgccaaggcaacaagtgccatctcctgcaaccaaaccgatgcaacagtacaactcctttgtttctcaaacaagaagtggtccggcaatggctcaagatgttagaatgaatggtaatccacggccatcagaaactacagcggctgcggccaaaccatactacatgccagacaatttgtttggtgatttgattgatgtgaagagttatggtggaggcaagatgagtagaacggcgagcatgcctagtccaaatggcagtggccaacctttgctgggtgggaagaaatag</cdnaseq> |
| Protein Sequence |
<aaseq>MYPVVTGPPPARLPASTRVDKATSHLLQGPDWAINLEICDTLNA DRWQTKDVVKAVKKRLQHKDPRVQFFTLTLLETMMKNCGEYVHFEVVEQHILQEMVRI VQKKHDTQVRDKVLILLDSWQEAFGGPGGKYPQYYWSYIELKRSGIMFPRRPVDAPPI FTPPATHHTQSYGSPTYPAGSLNERMTSDVETLSLGDLNNIRDTTELLCDMVNALNPS DRMAVKDEIISELVTQCRSNQQKLMRFVSSTGNEELLKQGLEINDHLQSVLAKHDAIA SGAPLPVETPRKDEIPREDPKIKPSAPPIAPPSAPPVEEDEDDEFAQIARRKNKSVIS SDEASSSAGDQALVPVDPVTSEASSSVASNAVVPVDSSPASGTRTREQDMIDLLSLTL YSPPEASTDSSSQTQNGTQQSVTSNGPELPPNYQPAASNGSHYSSNQQAYPTNQAYTP YNNYVVPWAQAGQGTQAGGAYQTQPMQQYGSSYPAPPWAMPASVNSTNPFQPATYQMQ NPPVASVAPTNTYPAPSSPYAAPPRQQVPSPATKPMQQYNSFVSQTRSGPAMAQDVRM NGNPRPSETTAAAAKPYYMPDNLFGDLIDVKSYGGGKMSRTASMPSPNGSGQPLLGGK K</aaseq> |
| Gene Sequence |
<dnaseqindica>80..219#1079..1157#1342..1440#1782..1895#1983..2131#2231..2312#2391..2476#2741..2971#3051..3948#agctccgtatcgcgtacgacacccgagccgaaccccccaacccgaggcggcggcggctgcggcggcggaggcgagcgggatgtacccggtggtgacggggccgccgccggcgaggctgccggcgtcgacgcgggtggacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgcgacaccctcaacgccgaccgctggtgaccgatcgctcgctcgctcgctcgcctcctcctccttcccccctctcctctcctctcgccgtgctagctcgcgccgccgccgccgccgtggtttgtgcggggatggattgttgtgctgcgggggcttggagctgagcttttgcggtggggaacggggaattttgtctgtttagcttttctgatttctgtcgcggctctgctgtcctcgtcgaaattggttttaggagggagcgttgactcgattggttcggcgtgtgctggtcaatgtttcgatcgatttcgcgctgttgctacctgattgaggttaaattgagatggattttgggaagtagcctccagtatgtagccatggattgttttccgcctccggtagcgattacatattatgagaactagaagggggtgtaaggcgccaaccggacgacttttgcatgttaacctcagcttagggtggcatgtccgtatgtttcagttaacttttagccagtcaaggaatcgtgatttgagatcagatgtagttatgtcttagctcccattgagacatctcgattgattatgacagaatttctggagggttatagtacatggtttatttttcaaaagggtacaaggtacttgcaccaatgtccctaaaaatatggattgatgtagttttagtggttactggttagtttaagtgcatatgcttgcaattttcgtcaatgaaaaagaaaaggtgtgaaggtagtttactattttctatcaaagttgttgttcatggtaaaaacgcatttgatgctccctgtcagatattgtttaactatgttgaatttggacaatgattagtgattactaaagtatttccactttgaatcaggcaaacaaaggatgtggtaaaagctgtgaagaagcggttgcaacataaagatccaagagttcagtttttcactttgacggtatgtggatgttttttgacaaacgtcaatttgttcgattgaatgaacatttacacatatattgttttatttatctgctcctgactatccacatggtaagggagcatatcaaattattcttctatcaacactacttcatgattatgatttttcttgtctgacgttggctgcaaaatcttttcagttgttggagacaatgatgaagaactgtggtgaatatgtccattttgaagttgttgaacaacatattttgcaagaaatggttagaattgtccagaagaaggtaatctccctgctttggttatagccactactctcgttactgctctcatgttgttttaattagcaaagaaaagtaaaagtacttttttttttggcactaggcctgtttggatactgggaacttgtatctaaatccttaggaatttgaactaaataaacagtctaaaaagaagttacctcacccaaacagtggaagttctttctgtgttaagaatttatggaagctttaatttctgaattttaattgagtaaccagtaagattgaggtgtatataattgtgtcaggatatttagaatgatgctgtttttctgagaatattcattttctgaatgtccatgcagcatgatactcaagtgagggataaagtattgatacttctggactcatggcaagaagcatttggtggacctggaggcaaatatccacagtattactggtcatacattgaacttaaggtatgcatcaaccttttagtttacttataatctacttaggacataaatctcatttaccataatagctgatgtcaaaatctgttacagaggtcaggaataatgtttcccaggcgccctgtagatgctcctccaatatttactccccctgcaacacatcatactcagtcttatggttcacctacatatcctgctggaagtctaaatgagagaatgacatccgatgttgaaactctgaggttgcattacaatctactacttattagctcttctcattccagctgtcctttttgttatcttactttatgattataaccttttattgcttttgtcatcagtttaggggacttaaataatattagagatacaacagaacttctgtgtgatatggtgaatgctttgaatccttctgatcgcatggtagggtgaaattctcaacacaaaactagttttgttgaagttcacgcaaatgatctattaacattttggtgaccccaggctgttaaagatgaaattatttcagagcttgtcacccaatgccgatcaaatcaacaaaagctcatgcgatttgtcagttccacagggtaagctcgttggatttctagtttgtgttccttcctgcttatgaataatgtcaaaaaaggtctgaagactcggtctctcaaactgtacaaagatataattcctttttccaatcaccacttggtgtttccctgaagtgacttcaaagtttgctgtttttcactagcacatgcataagcattctgctaattttatgccatataattggtgctataatccagactgcagaaattaatatctatgtttttgtggtttctgttgtttagaaatgaggagctactgaagcaaggcctagaaatcaatgatcacttacagagcgtacttgcaaaacatgatgccattgcttctggagctcctttgccggtcgaaacaccaaggaaagacgagatacccagagaagatccaaaaataaagccatctgcacctccgattgcacctccatccgcacctccagttgaagaggatgaagatgacgagttcgctcagatagcaagaaggtacttaaaagtatcctttaacaggcaatctattcattcattatcagaaatttagtcttaatgctttttatatctgcagaaaaaacaaatctgtgataagtagtgatgaggcatcatccagtgctggtgatcaggcccttgtacccgttgacccagtaacttctgaagcctcatcttctgttgcaagcaatgcagtggtgcctgttgactcgtctcctgccagtggtactcggacaagagagcaggacatgatcgaccttctaagcctcaccctgtacagcccccctgaagcatctacagattcttcttcacagacccaaaatggcacgcagcagtctgtcacgtcaaatgggccagaattaccaccaaactatcagcctgctgcatcaaatggatcacattactcttctaaccagcaggcatatccaacgaatcaagcttacaccccatacaacaattatgttgtaccttgggcccaagctggacagggcacacaggctggaggagcatatcaaactcagcccatgcaacaatatggatctagctacccagcaccaccatgggcgatgccagcaagtgtcaactcaaccaatccttttcagcctgcaacataccagatgcagaaccctcctgttgcttctgttgcccccacaaatacctatccagctccttcatcgccgtatgctgctccgccaaggcaacaagtgccatctcctgcaaccaaaccgatgcaacagtacaactcctttgtttctcaaacaagaagtggtccggcaatggctcaagatgttagaatgaatggtaatccacggccatcagaaactacagcggctgcggccaaaccatactacatgccagacaatttgtttggtgatttgattgatgtgaagagttatggtggaggcaagatgagtagaacggcgagcatgcctagtccaaatggcagtggccaacctttgctgggtgggaagaaatagttctagagttccaagctagctactacggttgttccacacgtgtctatatttgctgttgtatatctgttaaggtttcgcgttggttacatttgttaatttcgtggttgccgcttgtattttaaaagagtagagcatcattgcttgtaaatgatcgatgacattcatccgagggtggcttcttgctcgtttaacttcaccgctttggtttgtgaagtatgtgtatataatattcagctgatgtgcagacattctctcatatattgccaagctgaaacaactttt</dnaseqindica> |
| External Link(s) |
