Os09g0373800

From RiceWiki
Revision as of 20:58, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0373800

Description

EGF-like calcium-binding domain containing protein

Version

NM_001188878.1 GI:297726886 GeneID:9270321

Length

4004 bp

Definition

Oryza sativa Japonica Group Os09g0373800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13099280..13103283

Sequence Coding Region

13099280..13099591,13099704..13100047,13100125..13100451,13101906..13102064,13102149..13102246
,13103207..13103283

Expression

GEO Profiles:Os09g0373800

Genome Context

<gbrowseImage1> name=NC_008402:13099280..13103283 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13099280..13103283 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcggcatgagcgatggatccggtgccgcgacgacagcgggcggcgtgggcgatggatccgacgccggcggtggaaacagtaactgtgtcgatgatataaagggaggttaccgttgcaagtgctcccatggatacgaaggcaacccatacattaaagatggatgcaaagatatcaatgagtgccttgacaacgctacttacccatgcatgggaatatgcaagaatacgatagggagtttcgattgctcatgctacccaggaagttatatgaagaatggattctgcctgcctaatcaaaagtccacttttcctgctaggcatgtaataggtgcaagtgttgggttcgtcatcctagtgattgccataacttttgcatgctatgtccaacagagaagaaaactacaacatataaaaaacaattattttcaacagcatggtggtctgatactatttgaagagatgaaatctcaacaaggtcatgcattcaaaatcttctccgaagaagaattgcaacaagcgacaaagaaatttaatgaacaagaaattctaggccaaggaggcaatggaattgtttacaaggggcttctcaagagcaactctgaagtagctgtcaaaaaatgcatgacaattgacgagcaaaagaagaaagagtttggtcccatgcttgtgtacgagttcatcccgaacggtacactcttccatctcatccatgaaaaccatggtaatcacatctctctaatcactcgccttcggattgcccatgagtctgctgaggcgcttgcctacctccactcttgtgcttcaccaccaatcctacatggtgatgtcaagtcatccaacatcctccttgacaacaacttctcagcgaaagtctcagacttcggtgcttctatcttggctccaacggatgagatgcagtttgttacgctagtccaaggaacttgtgggtatcttgacccagagtacatgcaaacatgccaattaacagataagagtgatgagaacaagctcgaggatatgttgaatgatcaaattaagaataacgagaatatggagtttctggaagaaatggcagagttagcaagaaaatgcttagacatgtcttccataaataggccatcaatgaaggaaattggagacgaacttggtaggctaaggaaggtcatggaacaccaatgcgcaagacagaacccagaagagatggagagctttcttggggattcatcttatgtgatcaactcaactgttgagagcacaaaaagtttcagcattgagaagaacgctatgaagcgtctcaaatcagggcgctaa</cdnaseq>

Protein Sequence

<aaseq>MAGGMSDGSGAATTAGGVGDGSDAGGGNSNCVDDIKGGYRCKCS HGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFDCSCYPGSYMKNGFCLPNQK STFPARHVIGASVGFVILVIAITFACYVQQRRKLQHIKNNYFQQHGGLILFEEMKSQQ GHAFKIFSEEELQQATKKFNEQEILGQGGNGIVYKGLLKSNSEVAVKKCMTIDEQKKK EFGPMLVYEFIPNGTLFHLIHENHGNHISLITRLRIAHESAEALAYLHSCASPPILHG DVKSSNILLDNNFSAKVSDFGASILAPTDEMQFVTLVQGTCGYLDPEYMQTCQLTDKS DENKLEDMLNDQIKNNENMEFLEEMAELARKCLDMSSINRPSMKEIGDELGRLRKVME HQCARQNPEEMESFLGDSSYVINSTVESTKSFSIEKNAMKRLKSGR</aaseq>

Gene Sequence

<dnaseqindica>3693..4004#3237..3580#2833..3159#1220..1378#1038..1135#1..77#atggcgggcggcatgagcgatggatccggtgccgcgacgacagcgggcggcgtgggcgatggatccgacgccggcgggtggcgggggcgatgaatccggcaccgtgcggcggtgggctagggtttgggatattttggatttttatttttttttgtttgctgaatttattttcgcatgcggctggtataagcaaccgcatgcggttgggccggccgcatgcgaaaagggtgatttttttgcagaccttctcgcatgcaaagatgccttttgctcgtatggaaaaagccttttttactagtgtacaactgaggtgatgtcttctgtacttttggcacatttaacatgaaaaagtaaaaaaaaaagaaaatggtatgttgaaggattgaatgataactcaggtgatatatattatacttttattcttcttagtatctcaaagtccattatattaggaacaaataaatgggataatatttgacggatagagtattaaaaagtatggtagctctcactaaatttctcacagaggctcattggggttagtccacaataatatttgcctgatttagcagatttttgttgcaatttgttttactatataataataaaataaaacatgcctggtgacaatgtcttcttagtcgtagccaatgtataatcagctattgcttctagtattgactatatattacctatatatatacaacatgcctgcaggttgtaacaggttgtgtatcaaaatgcgaacgtgcccttaaggatggtgaatgctctggtgatggttgctgccaagttgatttcccgacaaagggatggcgttatagtactactttcgatagtgaaaactataataccagtctaatatggaggaacaacccgtgcagctatatggcagtgatagagaccacagctttcaaattccactatattctatgacacatataatggggcagctcccgttgtcctagactggatcatatatcaatggatgtatgtgatattgctataaaaaacaccacttcatatgcgtgtattagtggaaacagtaactgtgtcgatgatataaagggaggttaccgttgcaagtgctcccatggatacgaaggcaacccatacattaaagatggatgcaaaggtacagctatgcgctatatattaatacattcatataagatagcagaaatattaatgttaaccaagcgtggtggttttatttcagatatcaatgagtgccttgacaacgctacttacccatgcatgggaatatgcaagaatacgatagggagtttcgattgctcatgctacccaggaagttatatgaagaatggattctgcctgcctaatcaaaagtccacttttcctgctaggcatgtaataggtataggctcctttcttccgtacaaaaagataattacatgtgtgggcatcaacctgaaagtagtaattaaagattgcgcccacattactcactcaatccttgatttcaaatacaagagctcatcattacgaattgagaattttcttttgtttaaagaacatacgaagaggtactataatttttagcgtaaaatttgatatattatatcttgttaactgagatattaaaaggtacaaaatttgtaatagagaatacgctaccttcttaaaaaaaggtacacgaaagcttttgttatgataaacttttggctatatcattttcacgtatatacctgaaacctacactttaaataataaataattaaacacattctttctgactggagggagtagaattagattcatagttacttgaataaataatatccctctcatgaatgaatgattgatcatttttattgtattaatgaatgcggacaagtgcattttaatgtacgatcttaaacttgcgtagcagtataaaacgaccaatatttgatattagatggagtaaaataaagtctatgtgacttcgtatcacgaaacttcatggttacccatgagatattattgctagcagctttatctagtattgtacacacagttttctaccattttattcaaaaagaacttgtttaaatagcctaaaacaaacaagatccaagccaagatcgcataacctaaacaaggaccaaataatcattaggccatgcatggatcttggtcgtgtttgccatggatcttggtcgtgtttagttgttttggcaaaaatattttgactatacggacacatagggttgttttggtttgataccaaaaaatatgccctaccaatttataaacaaattgaatactatatgtgttagtttggattgagccaaatatttgatagtgccccaatcctatttggtcatatcctagaagtttcttccttatacaatgagaatttggctttatattggtaacaatccaaatgattgctaaataattttaccctaccaatattttggtagtgccaaagtttgcctagactttggcactaccaatgaattggtagggtaaagaaccaaacaagtccatatttaaagtattaaacgtagactaataacaaaacaattacatatttcacctgtaaactgcgagacgaatctattaagcctaattaatccgtcattagcaaatgtttactgtagcaccatattgtcaaatcatggagtaattaggctcgaaagatttgtctcgcaatttacatgtaaactgtataattggtttttttcgtccacatttaatgcttcatgcatgtgtccaaacatttgatttgacgaaaaagttggaagtttgaagggaactaaacacagcctttctgtacatttcaaaaaaaaaatcataactctagtttacttttgaattgtgcaggtgcaagtgttgggttcgtcatcctagtgattgccataacttttgcatgctatgtccaacagagaagaaaactacaacatataaaaaacaattattttcaacagcatggtggtctgatactatttgaagagatgaaatctcaacaaggtcatgcattcaaaatcttctccgaagaagaattgcaacaagcgacaaagaaatttaatgaacaagaaattctaggccaaggaggcaatggaattgtttacaaggggcttctcaagagcaactctgaagtagctgtcaaaaaatgcatgacaattgacgagcaaaagaagaaagagtttggtaaagaaatgctaatcctatcccagaccaaccacaaaaacattgttaaactattaggttgttgcctcgaagtggaggtcccatgcttgtgtacgagttcatcccgaacggtacactcttccatctcatccatgaaaaccatggtaatcacatctctctaatcactcgccttcggattgcccatgagtctgctgaggcgcttgcctacctccactcttgtgcttcaccaccaatcctacatggtgatgtcaagtcatccaacatcctccttgacaacaacttctcagcgaaagtctcagacttcggtgcttctatcttggctccaacggatgagatgcagtttgttacgctagtccaaggaacttgtgggtatcttgacccagagtacatgcaaacatgccaattaacagataagagtgatgtatagcttcggagttgttcttctcgaacttctcacacgcaagaaggcatgcaaccttgatgcaccagaacatgagaaagtcttgtcgatgatgtttctctctgcgatgaaggagaacaagctcgaggatatgttgaatgatcaaattaagaataacgagaatatggagtttctggaagaaatggcagagttagcaagaaaatgcttagacatgtcttccataaataggccatcaatgaaggaaattggagacgaacttggtaggctaaggaaggtcatggaacaccaatgcgcaagacagaacccagaagagatggagagctttcttggggattcatcttatgtgatcaactcaactgttgagagcacaaaaagtttcagcattgagaagaacgctatgaagcgtctcaaatcagggcgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0373800, RefSeq:Os09g0373800