Os09g0394900

From RiceWiki
Revision as of 20:58, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0394900

Description

Similar to Annexin-like protein

Version

NM_001069631.1 GI:115479004 GeneID:4346972

Length

4968 bp

Definition

Oryza sativa Japonica Group Os09g0394900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14360252..14365219

Sequence Coding Region

14360359..14360434,14361955..14362098,14362330..14362550,14363048..14363263,14363351..14363440
,14364669..14364869

Expression

GEO Profiles:Os09g0394900

Genome Context

<gbrowseImage1> name=NC_008402:14360252..14365219 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14360252..14365219 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcctcaccctgccgccggcgcccaccaaccctcgccaggacgccatcgacctccacaaggccttcaaagggtttggctgtgatagtacaacagttataaatatacttactcatcgtgactcgatgcaacgcgcgctcattcaacaggaatacaggactatgtattctgaggatctctctcgccgtatatcatctgaactcagtggacaccacaagaaagcaatgctgctatggattcttgatcctgctggacgagatgcaactgttttgagagaagctctgagtggtgatactattgacctgagagcagccactgagataatatgttccaggacaccatcgcagctgcaaataatgaaacagacttatcatgcaaaatttggtacttatcttgagcacgacattggtcagcgcacatcaggcgaccatcagaagctcttgcttgcttatgtggggattccacgctatgaaggtcctgaggttgatcctactatagtgacacacgatgcaaaggacctctataaagctggtgagaaaaggctgggcactgatgagaagaccttcatccgcattttcactgaacgcagctgggcacacatggcatctgttgcctctgcttaccatcatatgtatgatcggtcactggagaaggttgtgaagagcgaaacatctggaaactttgaacttgctctgctaactatcctcagatgcgctgagaatccagccaagtattttgcaaaggtcttgcggaagtccatgaaaggtatgggcactgatgatagtacacttataagggttgtagtaacaaggactgagatcgacatgcaatatatcaaggctgagtactacaagaaatacaaaaaatcattagctgaagctatccattccgagacctcaggaaattatcgaacattcctcctttctctagttggtagccattag</cdnaseq>

Protein Sequence

<aaseq>MASLTLPPAPTNPRQDAIDLHKAFKGFGCDSTTVINILTHRDSM QRALIQQEYRTMYSEDLSRRISSELSGHHKKAMLLWILDPAGRDATVLREALSGDTID LRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYVGIPRYEG PEVDPTIVTHDAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLE KVVKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEID MQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSLVGSH</aaseq>

Gene Sequence

<dnaseqindica>108..183#1704..1847#2079..2299#2797..3012#3100..3189#4418..4618#gttgcagattactaccaccacctccccaaaatcccaatcgaatcgaaatcgaatcgagtcgagtcgccgccggagccggagacggaggcggcagcggcgcagcggtaatggcgagcctcaccctgccgccggcgcccaccaaccctcgccaggacgccatcgacctccacaaggccttcaaaggtccccccccccccccccctcaaatttctctagctttctctccccttgcggggggagtcgcgacgcgatcggatgtagggttcgcgcggccttggggggtggtgatggtgtgtgctgttttggcgagcttgatgatattatgcttttttttagggttataagggatttgcggtttttggactttcggtgcagcggcgagcgttttgttgtaatggattgttagtgtttgtgtggtgtggtcagcgcgcggccggtctcggtctcagatgtgttgaggcttatgggggaagtggggggaatcgccgttgcagtatccgctggattgttgtcatgtattgaattcaggtgtttttttttgttttggaaggtagaactgttgttgttggagtcttagactgtcagatgttgaaaacctggacaggacgggccgaggtcgggaatggggcagctttcaagggttctagtggtggtaattgcatcgactaggacttttttgacccattttagaaattgccccgaacagaatttggagtcaagtggatttatacggagataaactacagtcttgtccccatctcaacaggtccattttcagggtcaaagtgcacaaccgtgtagtcttaatagctgctggatgtgggtgttattgggtatagagcacacagttaaattgaaaaggaaaaggaagtaatcttatcatctatggtaaaaaaaaagaattcgttttagataatattgacatgcttgtttttgttatcgtttttgcgactacaaaaccccatgtgtgatttacatgttgaaagcacaaagttatacgagtcattaggacattcccaagtcgtttagaaaatatgttttggcataaaaagaattacatattatggacatcttcaccgtgaattttataacatcattcttatgcttcaatctatataattctttacttatttatagacaaagctagaaaagtttgactgagacaaatcctcaaatgacttatctgtttgatttttctggtccattttatcatctattactttctctgtataataattttttctttagattgggtatgacttcatatgatttagtaatatctggttgcttccaaaattaagtatactactgactcttattccccccggtacaccaagccctaggcaatcgcattacccatttgatgtgaccattttgccctggttatttgtttggtgtgcgaatctgcaggcaagtactcaggaactcagaagcctaactgagtaggagtgggaatgaaattattaattgtagggtaaaatgtgaagccaggttgtgggatctgagttgtgacaaatatctgtgaacagtttttgtggtcaaaggttacaattgtgggtggagaaactccattttagcaattgagcagtttgcataaatacaacctttagttgatattgtgaaattttcattactagctagtagctgccctgctttatgttcttattttcctttttgattttgacctgctgatggtcttacagggtttggctgtgatagtacaacagttataaatatacttactcatcgtgactcgatgcaacgcgcgctcattcaacaggaatacaggactatgtattctgaggatctctctcgccgtatatcatctgaactcagtggacaccacaaggcatgcaaaattctagaagaattcttcattttactgaataatagatcaaattataaagctaactgtagcgatatacttaatctagctgtagattcagatagtagccaagtgataattaatacaagttacttcgataagtgttaaccaaatatttgttacctcacttctgaaaagagttaaattactctagattgatgtgctatttatgattaactttgttcatgattgcagaaagcaatgctgctatggattcttgatcctgctggacgagatgcaactgttttgagagaagctctgagtggtgatactattgacctgagagcagccactgagataatatgttccaggacaccatcgcagctgcaaataatgaaacagacttatcatgcaaaatttggtacttatcttgagcacgacattggtcagcgcacatcaggcgaccatcagaaggtcctattcttattagagtatctgttctatttttcgtttgacttcttacatggatgaggtgctcgaattgcttatcttttgtagttttgaaagctgtttctgaaacacggatattttgctatttcttttctcagaaatatcttaatagccagtgaaactctttatcttggcatctattgtttcaccttacctgtgatgtacaaagagatctgcactatataggcttactgccagcggtggagataggggggacggccaatggcctgccccccttcaatatttgtgtttacagataatcatctaattaattaggtgaatagcctaagtaagtatattaagccccatccaagattcttaggcccctcccatgcctaaatcctggctccgccgctgcttactacccaatatgccgatcaatattttcatattaatatacctatacgaattcacttttatttttctgctggaggcagtgaatgatataacgtatgttgcagctcttgcttgcttatgtggggattccacgctatgaaggtcctgaggttgatcctactatagtgacacacgatgcaaaggacctctataaagctggtgagaaaaggctgggcactgatgagaagaccttcatccgcattttcactgaacgcagctgggcacacatggcatctgttgcctctgcttaccatcatatgtatgatcggtcactggagaaggtaataatactcttgtatacatgtattggtctctcactctcatggaacttttcactgtgatcatggagtgtcctccatttatggtaggttgtgaagagcgaaacatctggaaactttgaacttgctctgctaactatcctcagatgcgctgagaatccagccaagtattttgcaaaggtatctcattctgcaatcttcagaaagaaaatttataagcattatggtactattgattcattggagaggcaaattcaccaaatagtgcaccgaattttcttgttacatatattgcttttttatccacatgaagtatggcagacagctgtgtacttttgatgcagcaaattatctatagcatctggaaataaatatgtggttgccccatccattactgaacataaagcctgcaagagctggctaagctctgtagttatcttattttctgtgcatctctagttgcaatccatgggcgtcttttttccttggagtcctatcataatcacacgactgaatcctctattaccttccttccccttatcagaaataaatttgaaaatatactgttcattcaattattttcagaaatattcgggatgcaaaattttttgcagaaatataccgtcggtctcgcacaaccattgcgcgaaaatgacatagcgtgacgtcgcgagcggtatcgcgcagcgaaagtgcaagaccgtgtggtctcgcggaaccgaagagagagaccgcgcggtctcgcatatgggaacagcgacaccgtccaacggctccactttaattagtgattaattacctaattaattattaactaataataattagtgattaactatcctgattagcgagaccgttcagcaaattaattgaatcggcggtatcgctgtctggtccctgagaccgttcggtcttgctattccattccacgcggtctcgcacgataatgcctacgacgtcacggccacgccattttcacgtaacggttgtgcgagatcgacggtatatttctgccaaaaaaaatgcatcctgaatattccttaaaaaaattgaatgaacagtatatgttcaaatttaattccccctatcactcctggactgatcactagtgctcttatcattttaggctggtaactagtagtattactgatgttacaatgtttctattttaacatgctgctaattctagatgtctaatgcatatgaaaattttttccatggccattgatgtggttatctgtttatgcagaggtgcttagcatcctcaaacctacctatatataaagaacttcatgaaatgtgttatcctctccatttaagacttcttttgattccttctttaagattgacgtcttcttcatttggtagttgtgatgaccttatttttctctgaaccatataaatttaggtcttgcggaagtccatgaaaggtatgggcactgatgatagtacacttataagggttgtagtaacaaggactgagatcgacatgcaatatatcaaggctgagtactacaagaaatacaaaaaatcattagctgaagctatccattccgagacctcaggaaattatcgaacattcctcctttctctagttggtagccattaggtacgtcctctggtgctgatgccttactatgccacaatatattagtttaagttaagaaattggaagtgctcatattaactcttgtgttttccctctgcttctcttaggctacatttcgtcgaccctgtggcacttgacgttccatgactatcctaaatgcagtggttctacctggaaactgtaaaatttcgccatcattgtgctctctattcgtgtgtgcttgcttaaaaatgtgtgtatatatataacctgggcattaaatagttggtgcttaatatggtttggtggttccatctgacaagtcactcgttactcggtgcatttattcgaataagtgatggtatttggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0394900, RefSeq:Os09g0394900