Os05g0477800

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Revision as of 10:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0477800| Description = Conserved hypothetical protein| Version = NM_001062378.1 GI:115464486 GeneID:4339107| Length = 1527 bp| Definition ...")
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Gene Name

Os05g0477800

Description

Conserved hypothetical protein

Version

NM_001062378.1 GI:115464486 GeneID:4339107

Length

1527 bp

Definition

Oryza sativa Japonica Group Os05g0477800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23549826..23551352

Sequence Coding Region

23550074..23550604,23550696..23550938

Expression

GEO Profiles:Os05g0477800

Genome Context

<gbrowseImage1> name=NC_008398:23549826..23551352 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:23549826..23551352 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggatgcgtttgtcgattgattgttgcgaacacagatttgtgcttcgtgccgccgctggtgtacgcggtgatggggagctcgaggaacctcggggtggggccggtggccacgtcgtcgctgctggtggcgtccatcgtcggcggcaaggtgagggcgtccgacgacccgcggctgtacacgcagctcgtcttcgtgtcggccttgttcaccggcgtcatgtaggctactcttggattcctcaggctgaggatcctgatggatttcatgtcgcggtcagcaatcaccgggttcatgggtggcacggcggtcgtgatcgtgctgcagcagctcaagggcttcctcggcatgacgcacttcaccaccaggaagtctccacgttcgtctccgcgttcgtcgtcggggccgtcgcgctcatcgccgcggcgttcgccatccctcctgcaacgtcgggcacgccattgccgagcgcgcggagcgtgacggcggccatagacggggagaggcggaggcggcccgcgaggcgggaaatcgctgggggagaagtgggacccgcggcggcggctaggacgcggaagtggaggaggagcgcgagcaccgggagggaggcgcggcgcagcgtggagagaggagaaaagcgtgcgagagagaggggaggggaaagagaggatgatgatgtggccacgctaacatgtggggcccacgtgggtctcacgttgactcagctgacacgtaggataaaaccggggtcaaaaccaccaaagaacctaaattga</cdnaseq>

Protein Sequence

<aaseq>WMRLSIDCCEHRFVLRAAAGVRGDGELEEPRGGAGGHVVAAGGV HRRRQGEGVRRPAAVHAARLRVGLVHRRHVGYSWIPQAEDPDGFHVAVSNHRVHGWHG GRDRAAAAQGLPRHDALHHQEVSTFVSAFVVGAVALIAAAFAIPPATSGTPLPSARSV TAAIDGERRRRPARREIAGGEVGPAAAARTRKWRRSASTGREARRSVERGEKRARERG GEREDDDVATLTCGAHVGLTLTQLTRRIKPGSKPPKNLN</aaseq>

Gene Sequence

<dnaseqindica>749..1279#415..657#cacaccgcgtcgcctgtcaccgaccgccgtcgcacgttcgtctccacgttcgtcgttggggccactgcagggccaggttgaaccagcagccggcggcgacgcggccgttcagcgtggcggtgcgggcggggctgaaggacacgctcttccccgatgacccgttccgcggctcggcgggatgccgcccgcgcagcgcgcgtggtgggtggcgaggtacttcgtgccggcgctggactgaggtgcggggtactccgcggcaagcttctggtacgacctcctcgccggtgtcaccatcgccaacctctccatcccgtagggcatcagctacgccaccctcgccggcatccctccggtcatcagcctctgttagatcacgccaaattaaccgttcatgtcgcggacgaacacctttgatggatgcgtttgtcgattgattgttgcgaacacagatttgtgcttcgtgccgccgctggtgtacgcggtgatggggagctcgaggaacctcggggtggggccggtggccacgtcgtcgctgctggtggcgtccatcgtcggcggcaaggtgagggcgtccgacgacccgcggctgtacacgcagctcgtcttcgtgtcggccttgttcaccggcgtcatgtaggctactcttggattcctcaggtaacgcgagatcgatatgaccgatctctccgatctttatgtgtgttcctgagatttcctgactgatatatcgatccgtgtttgctgcaaggctgaggatcctgatggatttcatgtcgcggtcagcaatcaccgggttcatgggtggcacggcggtcgtgatcgtgctgcagcagctcaagggcttcctcggcatgacgcacttcaccaccaggaagtctccacgttcgtctccgcgttcgtcgtcggggccgtcgcgctcatcgccgcggcgttcgccatccctcctgcaacgtcgggcacgccattgccgagcgcgcggagcgtgacggcggccatagacggggagaggcggaggcggcccgcgaggcgggaaatcgctgggggagaagtgggacccgcggcggcggctaggacgcggaagtggaggaggagcgcgagcaccgggagggaggcgcggcgcagcgtggagagaggagaaaagcgtgcgagagagaggggaggggaaagagaggatgatgatgtggccacgctaacatgtggggcccacgtgggtctcacgttgactcagctgacacgtaggataaaaccggggtcaaaaccaccaaagaacctaaattgaacggtttttgcaagttgtgaacggtttttgcggttgggggacgattttgtaactggatgacaagttgagggaccttcggtgtactttttcctttttgggctggaatgataggctttgtctgaccaggcccgtctattgtgtatttggagcggcccgactaacttaaattctgggctggaatggttggcaactcatgtaagaaacactgcgtgtattttcccattgggaccacctatacatttgtcgac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0477800, RefSeq:Os05g0477800