Os09g0407300

From RiceWiki
Revision as of 20:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0407300

Description

Conserved hypothetical protein

Version

NM_001069670.1 GI:115479082 GeneID:4347015

Length

5541 bp

Definition

Oryza sativa Japonica Group Os09g0407300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15021799..15027339

Sequence Coding Region

15022099..15023453,15024493..15024569,15024966..15025087,15025200..15025286,15025362..15025428
,15025497..15025652,15027051..15027199

Expression

GEO Profiles:Os09g0407300

Genome Context

<gbrowseImage1> name=NC_008402:15021799..15027339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15021799..15027339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggtggaggatccggacctggaggacccgaacccggacgtgggggagctgttcagccactacgacgggctctacttccgcggcgcgctcgccggcgccggcttctccgtccagtggagctcgccgccgtcgcggatggccggttcttttggatcgtgtaccttcggaaaaccggataataccataacattgtctgaaactgtgctgaaatatcgctcaagtattgatatgaagaatgcattgctgcatcagatgatccatgcaatcttatttgtaaagcatcataggaaggactgccggggtcatggtcctatttttcgtgcttggatgactgctattaacacctgttctattgacgatcaccagagaccacctgatgggtacaatatcaccaccagacatgatttttctccggacaagtccacccgcagcctaagtggttttttgtggaagtgtgaatattgtgggaatacacttgtgagagccacaaacatcggtgctccatctgatgcctgctgcattgagaatgttgacaactgctcaacctgtggcaacatgctttgccactggcataaccacaagatgaactgtggtggcacatacacaaagatgggcacatcaacatcggcagaagttcaaaacaatgttcaaggtacaaaaagatgcccaactgacatgaaaatggccaagtcacaaagaaccatacggaaaccagagtcaccagattcagatggattgcaggagaaagctactgtcatgaaacaaaaagcagaaggcgagcttctcgcacttgtggctggcagcaatttaaaattaacaggaagtaactcttcaaagaagggagtgaagaggcataggcctgaagacactcaagacacaaatgctatgctttctacccctctgaaaaacctgaagctgggcctagacttggtttcatctgggaagcacagggtgtcatctatagttggtagcaataacacaaaatcatcaagaggtagtgcttcaaggaagcaacgcaaacgacattcacctgagaatgttcagaagtccagtgttctgcctgctctctctcaaaagaagctgaaactgaaggaagacctggttgtatcagggaagaacgagcctttatccctagtgaatttcagcaatggaaaatcagcaggaagtaactcatcaaaaaaggtaagcaagcagcatgaacttgaaggagttcagaaatcctgtgttcagcctgctagccctccgagaaaaccgaggcaagatcttgttgcatcggtcaaaaccgagatttcttgtctagccagtcgcagcgatgctaaagtgttgagaggcagctcctcaaaatgtgcaggcaatcagcatgagcctgcagacattcagaaaagcatcgctctgccttctgcctctgaaagtaaactcaagcgacagaatgaaattagctcctcaactaaggcagggatgcaggacaagcctagaggcactcagaaaaccattgatctgcctgcttcccctcaaacaaaactgaagcaatcagtgttgcagaagcaaaagagacagtgcggaactaggaagtcagctaatgagcaatttgccgtgattagtgcttggctgaactactacgagtcagaaggatcaagtggatcaactgagccccttgtaaacaaaagaacagagcggagaaggatagcgaggaataggataacttatacacggtcaaggaagcaaaatgccaggggaaatgcttccatcaagtcccaaccttctgaagatgactcgtctcaagcaaaagctgcagctccatgcttggagattgttgttagcaccccttctgagcaggtggtaaatcaatcccccggatgccagtcccagtcaccagctccatacttggcgatcgttcctttcgacgctgctcatgatatggttccacttcagtcagcagatccacccggtttaactgatgatccaaccattacttctggcataattgatatttcagatgatgactga</cdnaseq>

Protein Sequence

<aaseq>MERVEDPDLEDPNPDVGELFSHYDGLYFRGALAGAGFSVQWSSP PSRMAGSFGSCTFGKPDNTITLSETVLKYRSSIDMKNALLHQMIHAILFVKHHRKDCR GHGPIFRAWMTAINTCSIDDHQRPPDGYNITTRHDFSPDKSTRSLSGFLWKCEYCGNT LVRATNIGAPSDACCIENVDNCSTCGNMLCHWHNHKMNCGGTYTKMGTSTSAEVQNNV QGTKRCPTDMKMAKSQRTIRKPESPDSDGLQEKATVMKQKAEGELLALVAGSNLKLTG SNSSKKGVKRHRPEDTQDTNAMLSTPLKNLKLGLDLVSSGKHRVSSIVGSNNTKSSRG SASRKQRKRHSPENVQKSSVLPALSQKKLKLKEDLVVSGKNEPLSLVNFSNGKSAGSN SSKKVSKQHELEGVQKSCVQPASPPRKPRQDLVASVKTEISCLASRSDAKVLRGSSSK CAGNQHEPADIQKSIALPSASESKLKRQNEISSSTKAGMQDKPRGTQKTIDLPASPQT KLKQSVLQKQKRQCGTRKSANEQFAVISAWLNYYESEGSSGSTEPLVNKRTERRRIAR NRITYTRSRKQNARGNASIKSQPSEDDSSQAKAAAPCLEIVVSTPSEQVVNQSPGCQS QSPAPYLAIVPFDAAHDMVPLQSADPPGLTDDPTITSGIIDISDDD</aaseq>

Gene Sequence

<dnaseqindica>3887..5241#2771..2847#2253..2374#2054..2140#1912..1978#1688..1843#141..289#gcttcctcactaccaccttctcgttgatcctcctccccgttcttggctcccctcgcattcgtcctcacttcccttcttccatgggggttcgccgccgtgagtgaggaggaggaggagtagtactaggaggaggtgaggccatggagagggtggaggatccggacctggaggacccgaacccggacgtgggggagctgttcagccactacgacgggctctacttccgcggcgcgctcgccggcgccggcttctccgtccagtggagctcgccgccgtcgcggatggccgggtagggtcccttgctcagctcactggccctctcaatctcttgctgagggtttcttggaggagctgcattcttttctggtctttttttcttcttttttaatatatccagaaaatttgcagttcatgggaggagttagtagcatctcggtgtgatgctgtgggagaaatctttgtagcacacttggggtgttttgctttctctgtgattctctgcacttgctgctgctgctgctgctgctgctttgattttttttgttcgaatccctagcaagagacggattgatcatctcttctttttccgggcgatttcagagggagggagggtttggttttcttggtttgttagttctccatccttcaatcgacaagcttcagggtgttggtgatctttcacgaaaggtttcgtctttttagaaaaaaacgcgaatattagggaagtagctaatatcaaatactaattattagaaggggtggcttcgaacccaggtcccactaccttgtcgagctaatatcaaatgctaattattagaaggggtggggcttcgaaccaaggtcgtctagcccagtaccttctcgagctaccggaagacctcaatttcgtctttttagcatttggcacttgaagtgacataaatggcgccgcttttgtgcacttcttgctgagaagagcttcttgtctacaagtagatcatgcatattgtagtttgcatcgatatagattctttttttttagattggcactttggggggttagtactcaacggaaaccagtaatcgccggtagaaaaaaaatgttttgggatgaaagagaagtacataatctgtgaccaagttcattcataactgtctcttgttagtgtgcgggtttgcttaatgagatttgtgcatgatttctagtagtacctacttttggatcacttagacggatagtaaagactaaaaacctttaaaaattaaatcattagcagttcattatactcggtgaagtaggctgcattcattgggtagacaataagaagtttggtgatgcttctagcattctgcttaatctgatggttggccgggttgggtaatgggttatgcatgtacagtacagaataggttggggagatcatcagccagtgacgtggatgaaacagcatgtatctaaaagtttgtgtcagatagcatttccccatgattgatggcttcagttaagcaaatcctcctatcttcttgagaatacagaacatgcttcactatcacatcagataaactttagcaagagaggaaaaaaaatgttgattttgggattaaagatgcttgttagtatataactattttgttcaataaatagctgccctctgtaaagatttataggtacatcttggggaaataactagtttgtttgtctatgcagttcttttggatcgtgtaccttcggaaaaccggataataccataacattgtctgaaactgtgctgaaatatcgctcaagtattgatatgaagaatgcattgctgcatcagatgatccatgcaatcttatttgtaaagcatcataggaaggactgccggtaaatgtttgcttgtgttagctaataaatcttgttactctctgcttaatttcagtgaattcatgcaggggtcatggtcctatttttcgtgcttggatgactgctattaacacctgttctattgacgatcaccaggtcagtcttttctgtaagataagctatagtttgctgcgcttcattgatgatttctgaattcctttttttcctcagagaccacctgatgggtacaatatcaccaccagacatgatttttctccggacaagtccacccgcagcctaagtggttttttgtggaaggtaattctgaacttctgtcacctcctttcatttttttctccctttttggtgctaactttctttttaacctttcaattatcataatctgttgtgttcaattacaacctttcagtgtgaatattgtgggaatacacttgtgagagccacaaacatcggtgctccatctgatgcctgctgcattgagaatgttgacaactgctcaacctgtggcaacatgctttgccactggcataagtaagactcaatagttttagaatatagaatagtaccaaaacaatgcacagacaaaagtatgagctcaatctatttgagtctcgtttgaaaaatatatgtgcactgttcattcttcgttttgttctctcttaagaaatcacaagtgaaaagcagatcaataaaactggggaaactggatgcatatttgattttggaaatttcaactcaaaactgatcactaaatgcacatacctgatgcgtgttattgtgaatatatcaaaatcatctatgtttgagcattctaaatataacaaatcatctatgcttgagcattctaaataacttttattttcagcaaatgtttgcagcagttgattgcaaagatctgttattgactcaatatgctattttctgcagccacaagatgaactgtggtggcacatacacaaagatgggcacatcaacatcggcagaagttcaaaacaatgttcaaggtaattttcaaatttacatggtatctccttctgtttatcagcagtgaactaaccgttgaagagtatggaagccaagatcagctcctgtgcttcatatatttctctcttttctaccccattcgtttcatattttttttgaaaggacccattcatttcatattataagtcgttttgagtttgaccaagtttataaaaaaaatatagtagcatttctaatacaaaacaaacattgtatcaaaatatattcaatgctaaatttaataaaactaatttggtgttttatatattgctaattttttctataattttggtcaaacctaaaaaactttgatcaagaaaaaagtcaaacgacttataatatgaaacggagggggtaatagtttatccacccaaaccagttacgctcaattcaactacaaaattatgtgttttggaacaaaaatcagatagtcctgtttatattgaaagccacagcatttatacagtgatacagaggataccagtgtccaaagtactaccataatagaaataagcaaaatgacatgtaggttcgcagttttctattacactttattttcccaatccactccacttgtcttgactcttgaactgaaactttgttggttaaaaatcttggcatcaagaagcttgatcttcatttcaagtctgcctgcatcatttgatcactcaaacaatcgccgattatgtagcaagtagcaatagaaggcttcaataaacccacggtgatggaaataactagtagcgaagttgtgcaacaataattatttctacatgaggaactcgggtttggccctttccctgcacaacatagtagatcataataatgccttgccacagttgaattgattattttaggcttgtcattctgcgaattgtggtaatcccaccatttatgtaatgtggcattccccaattagaatgtagactttaaaatgatatcaaaatatcagttttgttatacctatctcttttgttcttatcattaaagtacatgttaccaaccttatagtttctccaggtacaaaaagatgcccaactgacatgaaaatggccaagtcacaaagaaccatacggaaaccagagtcaccagattcagatggattgcaggagaaagctactgtcatgaaacaaaaagcagaaggcgagcttctcgcacttgtggctggcagcaatttaaaattaacaggaagtaactcttcaaagaagggagtgaagaggcataggcctgaagacactcaagacacaaatgctatgctttctacccctctgaaaaacctgaagctgggcctagacttggtttcatctgggaagcacagggtgtcatctatagttggtagcaataacacaaaatcatcaagaggtagtgcttcaaggaagcaacgcaaacgacattcacctgagaatgttcagaagtccagtgttctgcctgctctctctcaaaagaagctgaaactgaaggaagacctggttgtatcagggaagaacgagcctttatccctagtgaatttcagcaatggaaaatcagcaggaagtaactcatcaaaaaaggtaagcaagcagcatgaacttgaaggagttcagaaatcctgtgttcagcctgctagccctccgagaaaaccgaggcaagatcttgttgcatcggtcaaaaccgagatttcttgtctagccagtcgcagcgatgctaaagtgttgagaggcagctcctcaaaatgtgcaggcaatcagcatgagcctgcagacattcagaaaagcatcgctctgccttctgcctctgaaagtaaactcaagcgacagaatgaaattagctcctcaactaaggcagggatgcaggacaagcctagaggcactcagaaaaccattgatctgcctgcttcccctcaaacaaaactgaagcaatcagtgttgcagaagcaaaagagacagtgcggaactaggaagtcagctaatgagcaatttgccgtgattagtgcttggctgaactactacgagtcagaaggatcaagtggatcaactgagccccttgtaaacaaaagaacagagcggagaaggatagcgaggaataggataacttatacacggtcaaggaagcaaaatgccaggggaaatgcttccatcaagtcccaaccttctgaagatgactcgtctcaagcaaaagctgcagctccatgcttggagattgttgttagcaccccttctgagcaggtggtaaatcaatcccccggatgccagtcccagtcaccagctccatacttggcgatcgttcctttcgacgctgctcatgatatggttccacttcagtcagcagatccacccggtttaactgatgatccaaccattacttctggcataattgatatttcagatgatgactgattttattttcgaattggcattgatcctgcaacaggcaatgctttcgatggatgaacaacatactggatgctaacaaactattggtgttaggctcgcatcattttggaaattgacattgtttttgcatagtgcctaatatagaacagtagctgcttatgagcataggattgcaaattttgcaactcatgttcgaaccacagtagcataaattcttatagtcccagcaggatctcagaagtagactcttatatcttgggcacaaacctctgaattatgatatgtaaaatgcaatttcaatat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0407300, RefSeq:Os09g0407300