Os09g0408600

From RiceWiki
Revision as of 20:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0408600

Description

Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)

Version

NM_001069677.1 GI:115479096 GeneID:4347022

Length

2691 bp

Definition

Oryza sativa Japonica Group Os09g0408600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15108476..15111166

Sequence Coding Region

15108655..15108759,15109315..15109398,15109506..15109576,15109655..15109742,15109849..15110040
,15110134..15111099

Expression

GEO Profiles:Os09g0408600

Genome Context

<gbrowseImage1> name=NC_008402:15108476..15111166 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15108476..15111166 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctcccccctctggtggtcggctcgaccatggcgtcgctggcgtccctctcgctcccggtctccaccgcctcgcagggccgcgcgcgcggcgcgggacccgtcacggcggcgccgcggcggcggagggtgagcgtcgtgcgggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggatcgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggtggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgtcctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtccgaggaggaggtcgccgtcgcgcaggcgcgtgcacaggctctcccgagaggcccgggccaagaaccccctcctccccacgttcccaaggctgcgccgccgccgccgccgccaccaccaccacatgcccctcctggaccgccgccgacgaagggcgtcgccacgccgcacgccaagaagctagcgaagcagcacagggtggacatctccatggtcgtcggcaccgggccacacggccgcgtcaccggagccgacgtcgaggcggccgctggcatcaagccaaagctaaagggcccaaagggcgctccacctccgcctccgcctccacctccatcgccacacagacaccccgctgctcaccctccgcctccgcctcaccaccccgctcctcgccctccgccgccgatggcggcggcaccccggcaaccagcagcgctgccaccggtgcctggcgcgacggtggtgccgttcacgacgatgcaagccgcggtgagcaggaacatgatggagagcctgtcagtgccaacattcagagtcggctacgccgtgtgcactgacaagctcgacgcactatgcgagaaggttaaatcgaaaggggtcacaaagacattgttgctggtgaaggccgcggccatggcgctcacgcagcacccggttgtgaatgccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggctgtcgcgatcgagggcggccttcttacgcctgtcttggaggatgttgataagttggatgtataccttcttgcacaaaagtggagaggcctgctcaagaaggcacgcatgaagcagctccaaccagacgaatacagttcagggacttttacgctgtctaatttgggtatgtttggtgtggatagattcgatgcaatccttccacctggtcagggggctattatggctgttggaggatcgagacctactttggtggccaacaaagatggtttctttagcatcaagaacgaaatgctggtcaatgttactgctgaccacaggattatatatggtgctgatttggcagcattcctgcagacatttgcgaagatcattgaggatcctgagagcctaacattgtag</cdnaseq>

Protein Sequence

<aaseq>MLLPPLVVGSTMASLASLSLPVSTASQGRARGAGPVTAAPRRRR VSVVRAKVREIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFY DGIVAVVLVPAGESAPVGAPIALLAESEEEVAVAQARAQALPRGPGQEPPPPHVPKAA PPPPPPPPPHAPPGPPPTKGVATPHAKKLAKQHRVDISMVVGTGPHGRVTGADVEAAA GIKPKLKGPKGAPPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQPAALPP VPGATVVPFTTMQAAVSRNMMESLSVPTFRVGYAVCTDKLDALCEKVKSKGVTKTLLL VKAAAMALTQHPVVNASCRDGKSFSYNSSINIAVAVAIEGGLLTPVLEDVDKLDVYLL AQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGGSRP TLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDPESLTL</aaseq>

Gene Sequence

<dnaseqindica>2408..2512#1769..1852#1591..1661#1425..1512#1127..1318#68..1033#ctccgctcgcgccgccgccgacgaggtcgccggactccgccgccgccgccgcaccaccgcccgcgacatgctcctcccccctctggtggtcggctcgaccatggcgtcgctggcgtccctctcgctcccggtctccaccgcctcgcagggccgcgcgcgcggcgcgggacccgtcacggcggcgccgcggcggcggagggtgagcgtcgtgcgggcgaaggtgcgggagatcttcatgccggcgctgagctcgacgatgacggaggggaggatcgtctcctggacggcggcggagggggaccgcgtcgccaagggggaccccgtggtggtggtggagtccgacaaggcggacatggacgtggagaccttctacgacgggatcgtcgccgtcgtcctcgtcccggccggtgagtccgcccccgtcggcgcccccatcgccctcctggcggagtccgaggaggaggtcgccgtcgcgcaggcgcgtgcacaggctctcccgagaggcccgggccaagaaccccctcctccccacgttcccaaggctgcgccgccgccgccgccgccaccaccaccacatgcccctcctggaccgccgccgacgaagggcgtcgccacgccgcacgccaagaagctagcgaagcagcacagggtggacatctccatggtcgtcggcaccgggccacacggccgcgtcaccggagccgacgtcgaggcggccgctggcatcaagccaaagctaaagggcccaaagggcgctccacctccgcctccgcctccacctccatcgccacacagacaccccgctgctcaccctccgcctccgcctcaccaccccgctcctcgccctccgccgccgatggcggcggcaccccggcaaccagcagcgctgccaccggtgcctggcgcgacggtggtgccgttcacgacgatgcaagccgcggtgagcaggaacatgatggagagcctgtcagtgccaacattcagagtcggctacgccgtgtgcactgacaagctcgacgcactatgcgagaaggtgtcatttctatgaatcccctgcaaaattggtgaaattcatagctgctagagttacagtttagttatagtttgactgaaatgaattgagtaggttaaatcgaaaggggtcacaaagacattgttgctggtgaaggccgcggccatggcgctcacgcagcacccggttgtgaatgccagctgcagggatgggaagagcttcagttacaacagtagtatcaacattgctgtggctgtcgcgatcgagggcggccttcttacgcctgtcttggaggatgttgataaggtacatgcttattgcggtagctgcgttctgttaagaaatgtagcattgttgcgaattagcgtctagtgaatgatctaacattttctgaaaaaaactaacattgcagttggatgtataccttcttgcacaaaagtggagaggcctgctcaagaaggcacgcatgaagcagctccaaccagacgaatacagttcaggtacagaatatgttgtattgtgattggcacttggttttttatggaaaccacgcttacctgaagtttgatgatttgtagggacttttacgctgtctaatttgggtatgtttggtgtggatagattcgatgcaatccttccacctggtcaggtaggttttttcattgactgcccagtcagtatgaaattttgacagaattgtatttgagcaatatgagaactaagaacaactgtttgtcgatggctcgctcaatgcagggggctattatggctgttggaggatcgagacctactttggtggccaacaaagatggtttctttagcatcaagaacgaaatgctggttagtttgtttttcacactttacggcctgtatgcctcaaagctctgctcatgctcagtgactgaccattgatagtaatttggcatatgcaattatgcattcaactctaaaaatcaatgagtaagatttccttgcaaatatggaactaagtatattttgtcatcttgtaattggatcggcaagtggaataatttatatgcacctgattgaacgtaataagtgcatagtgtagacctgttattttcagcttcatgcttgtgtcattattgttaaaacctagaggtgccaactggatgtttggcttctctgagttggttcctgtaatgagttcataccagtctgttgttctttcagtcaatcactgacttagtttagtttaaaaaaagttttttgtgacttatatctatacttattatctatcgattctgtgtggacagttcccagcagcgtgtcacagcacatcttacctttcaacatttcactggttgcaataaatttttctttcagagatacttctctgaagcttctgaactatgtttctcccaaccttttcaggtcaatgttactgctgaccacaggattatatatggtgctgatttggcagcattcctgcagacatttgcgaagatcattgaggatcctgagagcctaacattgtagggaaaatgtccctcacaagtgctccctaagtatctgcagtttgtttgattcgaattggaagaataattccaccgagcatttgtagccattaattgtaaatagttttgttattgttttaatgttattgccatatgatcaatattttttcttatacccgccacggaataagtgaaatgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0408600, RefSeq:Os09g0408600